RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 NISCHQ9Y2I1 1504 aa27.1■■□□□ 1.93
SIN3B-210ENST00000599880 CCDC180Q9P1Z9 1646 aa24.32■■□□□ 1.48
SIN3B-210ENST00000599880 ABCC9O60706 1549 aa23.85■■□□□ 1.41
SIN3B-210ENST00000599880 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
SIN3B-210ENST00000599880 NACADO15069 1562 aa22.86■■□□□ 1.25
SIN3B-210ENST00000599880 MYO15BQ96JP2 1530 aa22.68■■□□□ 1.22
SIN3B-210ENST00000599880 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
SIN3B-210ENST00000599880 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
SIN3B-210ENST00000599880 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
SIN3B-210ENST00000599880 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
SIN3B-210ENST00000599880 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
SIN3B-210ENST00000599880 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
SIN3B-210ENST00000599880 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
SIN3B-210ENST00000599880 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
SIN3B-210ENST00000599880 SCRIBQ14160 1630 aa22.04■■□□□ 1.12
SIN3B-210ENST00000599880 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
SIN3B-210ENST00000599880 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
SIN3B-210ENST00000599880 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
SIN3B-210ENST00000599880 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
SIN3B-210ENST00000599880 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
SIN3B-210ENST00000599880 BAZ1AQ9NRL2 1556 aaPredicted RBP21.05■□□□□ 0.96
SIN3B-210ENST00000599880 SMARCA2P51531 1590 aa21.02■□□□□ 0.96
SIN3B-210ENST00000599880 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
SIN3B-210ENST00000599880 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
SIN3B-210ENST00000599880 PEG3Q9GZU2 1588 aa20.95■□□□□ 0.94
SIN3B-210ENST00000599880 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
SIN3B-210ENST00000599880 BAZ1BQ9UIG0 1483 aaKnown RBP20.82■□□□□ 0.92
SIN3B-210ENST00000599880 WIZO95785 1651 aa20.64■□□□□ 0.9
SIN3B-210ENST00000599880 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
SIN3B-210ENST00000599880 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
SIN3B-210ENST00000599880 NESP48681 1621 aa20.57■□□□□ 0.88
SIN3B-210ENST00000599880 CUX2O14529 1486 aa20.54■□□□□ 0.88
SIN3B-210ENST00000599880 RSF1Q96T23 1441 aaPredicted RBP20.5■□□□□ 0.87
SIN3B-210ENST00000599880 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
SIN3B-210ENST00000599880 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
SIN3B-210ENST00000599880 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
SIN3B-210ENST00000599880 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
SIN3B-210ENST00000599880 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
SIN3B-210ENST00000599880 CFTRP13569 1480 aa20.25■□□□□ 0.83
SIN3B-210ENST00000599880 PRDM2Q13029 1718 aa20.23■□□□□ 0.83
SIN3B-210ENST00000599880 MRC2Q9UBG0 1479 aa20.21■□□□□ 0.83
SIN3B-210ENST00000599880 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
SIN3B-210ENST00000599880 WDR62O43379 1518 aa20.19■□□□□ 0.82
SIN3B-210ENST00000599880 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
SIN3B-210ENST00000599880 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
SIN3B-210ENST00000599880 DNAJC5Q9H3Z4 198 aa20.1■□□□□ 0.81
SIN3B-210ENST00000599880 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
SIN3B-210ENST00000599880 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
SIN3B-210ENST00000599880 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
SIN3B-210ENST00000599880 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.76
SIN3B-210ENST00000599880 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
SIN3B-210ENST00000599880 SUPT5HO00267 1087 aaKnown RBP19.68■□□□□ 0.74
SIN3B-210ENST00000599880 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
SIN3B-210ENST00000599880 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
SIN3B-210ENST00000599880 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
SIN3B-210ENST00000599880 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
SIN3B-210ENST00000599880 CUX1P39880 1505 aa19.58■□□□□ 0.73
SIN3B-210ENST00000599880 WDR97A6NE52 1622 aa19.58■□□□□ 0.72
SIN3B-210ENST00000599880 FGD5Q6ZNL6 1462 aa19.55■□□□□ 0.72
SIN3B-210ENST00000599880 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
SIN3B-210ENST00000599880 SOGA1O94964 1423 aa19.52■□□□□ 0.72
SIN3B-210ENST00000599880 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
SIN3B-210ENST00000599880 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.713e-7■■■■■ 30.5
SIN3B-210ENST00000599880 CHD1O14646 1710 aa19.48■□□□□ 0.71
SIN3B-210ENST00000599880 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
SIN3B-210ENST00000599880 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
SIN3B-210ENST00000599880 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
SIN3B-210ENST00000599880 PBRM1Q86U86 1689 aa19.39■□□□□ 0.69
SIN3B-210ENST00000599880 ABCA10Q8WWZ4 1543 aa19.38■□□□□ 0.69
SIN3B-210ENST00000599880 ABCA5Q8WWZ7 1642 aa19.37■□□□□ 0.69
SIN3B-210ENST00000599880 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
SIN3B-210ENST00000599880 GRIN2BQ13224 1484 aa19.36■□□□□ 0.69
SIN3B-210ENST00000599880 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
SIN3B-210ENST00000599880 WRNQ14191 1432 aaPredicted RBP eCLIP19.35■□□□□ 0.69
SIN3B-210ENST00000599880 RIMBP3CA6NJZ7 1639 aa19.35■□□□□ 0.69
SIN3B-210ENST00000599880 RIMBP3BA6NNM3 1639 aa19.35■□□□□ 0.69
SIN3B-210ENST00000599880 RIMBP3Q9UFD9 1639 aa19.35■□□□□ 0.69
SIN3B-210ENST00000599880 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
SIN3B-210ENST00000599880 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
SIN3B-210ENST00000599880 ARHGEF11O15085 1522 aa19.3■□□□□ 0.68
SIN3B-210ENST00000599880 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
SIN3B-210ENST00000599880 TRIM41Q8WV44 630 aa19.26■□□□□ 0.67
SIN3B-210ENST00000599880 FBLN2P98095 1184 aa19.25■□□□□ 0.67
SIN3B-210ENST00000599880 CLASP1Q7Z460 1538 aa19.24■□□□□ 0.67
SIN3B-210ENST00000599880 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
SIN3B-210ENST00000599880 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
SIN3B-210ENST00000599880 ERICH3Q5RHP9 1530 aa19.17■□□□□ 0.66
SIN3B-210ENST00000599880 GRIN2AQ12879 1464 aa19.12■□□□□ 0.65
SIN3B-210ENST00000599880 ARAP1Q96P48 1450 aa19.11■□□□□ 0.65
SIN3B-210ENST00000599880 FHAD1B1AJZ9 1412 aa19.09■□□□□ 0.65
SIN3B-210ENST00000599880 NUP160Q12769 1436 aa19.05■□□□□ 0.64
SIN3B-210ENST00000599880 CEP170Q5SW79 1584 aa19.05■□□□□ 0.64
SIN3B-210ENST00000599880 CYB5RLQ6IPT4 315 aa19.02■□□□□ 0.64
SIN3B-210ENST00000599880 SHROOM2Q13796 1616 aa19■□□□□ 0.63
SIN3B-210ENST00000599880 CUL7Q14999 1698 aa18.98■□□□□ 0.63
SIN3B-210ENST00000599880 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
SIN3B-210ENST00000599880 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
SIN3B-210ENST00000599880 ERCC6L2Q5T890 1561 aa18.89■□□□□ 0.62
SIN3B-210ENST00000599880 IGF1RP08069 1367 aa18.89■□□□□ 0.61
SIN3B-210ENST00000599880 KIAA0586Q9BVV6 1533 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms