RNA–Protein interactions for RNA: ENST00000599872.1

SMIM7-218, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 621 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-218ENST00000599872 NISCHQ9Y2I1 1504 aa18.45■□□□□ 0.54
SMIM7-218ENST00000599872 ABCC9O60706 1549 aa17.61■□□□□ 0.41
SMIM7-218ENST00000599872 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
SMIM7-218ENST00000599872 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
SMIM7-218ENST00000599872 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
SMIM7-218ENST00000599872 RB1CC1Q8TDY2 1594 aa16.35■□□□□ 0.21
SMIM7-218ENST00000599872 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
SMIM7-218ENST00000599872 DNAJC5Q9H3Z4 198 aa16.22■□□□□ 0.19
SMIM7-218ENST00000599872 NACADO15069 1562 aa16.05■□□□□ 0.16
SMIM7-218ENST00000599872 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
SMIM7-218ENST00000599872 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
SMIM7-218ENST00000599872 BICRAQ9NZM4 1560 aa15.95■□□□□ 0.14
SMIM7-218ENST00000599872 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
SMIM7-218ENST00000599872 CC2D2AQ9P2K1 1620 aa15.82■□□□□ 0.12
SMIM7-218ENST00000599872 CHIC1Q5VXU3 224 aa15.7■□□□□ 0.1
SMIM7-218ENST00000599872 EIF4G1Q04637 1599 aaKnown RBP15.6■□□□□ 0.09
SMIM7-218ENST00000599872 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
SMIM7-218ENST00000599872 SHROOM4Q9ULL8 1493 aa15.54■□□□□ 0.08
SMIM7-218ENST00000599872 SCRIBQ14160 1630 aa15.36■□□□□ 0.05
SMIM7-218ENST00000599872 CUX2O14529 1486 aa15.36■□□□□ 0.05
SMIM7-218ENST00000599872 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
SMIM7-218ENST00000599872 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
SMIM7-218ENST00000599872 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
SMIM7-218ENST00000599872 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
SMIM7-218ENST00000599872 NESP48681 1621 aa14.94□□□□□ -0.02
SMIM7-218ENST00000599872 NCAPD3P42695 1498 aa14.86□□□□□ -0.03
SMIM7-218ENST00000599872 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
SMIM7-218ENST00000599872 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
SMIM7-218ENST00000599872 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
SMIM7-218ENST00000599872 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
SMIM7-218ENST00000599872 KIF21AQ7Z4S6 1674 aa14.66□□□□□ -0.06
SMIM7-218ENST00000599872 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
SMIM7-218ENST00000599872 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
SMIM7-218ENST00000599872 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
SMIM7-218ENST00000599872 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
SMIM7-218ENST00000599872 PDS5BQ9NTI5 1447 aa14.58□□□□□ -0.07
SMIM7-218ENST00000599872 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
SMIM7-218ENST00000599872 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
SMIM7-218ENST00000599872 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
SMIM7-218ENST00000599872 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
SMIM7-218ENST00000599872 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
SMIM7-218ENST00000599872 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
SMIM7-218ENST00000599872 WDR62O43379 1518 aa14.47□□□□□ -0.09
SMIM7-218ENST00000599872 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
SMIM7-218ENST00000599872 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
SMIM7-218ENST00000599872 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
SMIM7-218ENST00000599872 CYB5RLQ6IPT4 315 aa14.37□□□□□ -0.11
SMIM7-218ENST00000599872 ARHGEF11O15085 1522 aa14.36□□□□□ -0.11
SMIM7-218ENST00000599872 PEG3Q9GZU2 1588 aa14.35□□□□□ -0.11
SMIM7-218ENST00000599872 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
SMIM7-218ENST00000599872 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
SMIM7-218ENST00000599872 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
SMIM7-218ENST00000599872 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
SMIM7-218ENST00000599872 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
SMIM7-218ENST00000599872 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
SMIM7-218ENST00000599872 CFTRP13569 1480 aa14.07□□□□□ -0.16
SMIM7-218ENST00000599872 IFT140Q96RY7 1462 aa14.05□□□□□ -0.16
SMIM7-218ENST00000599872 WIZO95785 1651 aa14.04□□□□□ -0.16
SMIM7-218ENST00000599872 FBLN2P98095 1184 aa14.03□□□□□ -0.16
SMIM7-218ENST00000599872 ILDR1Q86SU0 546 aaPredicted RBP14.03□□□□□ -0.16
SMIM7-218ENST00000599872 CHD1O14646 1710 aa14.01□□□□□ -0.17
SMIM7-218ENST00000599872 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
SMIM7-218ENST00000599872 RSF1Q96T23 1441 aaPredicted RBP14□□□□□ -0.17
SMIM7-218ENST00000599872 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
SMIM7-218ENST00000599872 AQRO60306 1485 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMIM7-218ENST00000599872 TOPBP1Q92547 1522 aa13.9□□□□□ -0.19
SMIM7-218ENST00000599872 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
SMIM7-218ENST00000599872 TARBP1Q13395 1621 aaKnown RBP13.81□□□□□ -0.2
SMIM7-218ENST00000599872 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
SMIM7-218ENST00000599872 TOP2AP11388 1531 aaKnown RBP13.77□□□□□ -0.21
SMIM7-218ENST00000599872 GAPVD1Q14C86 1478 aa13.77□□□□□ -0.21
SMIM7-218ENST00000599872 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
SMIM7-218ENST00000599872 TDRD9Q8NDG6 1382 aaKnown RBP13.76□□□□□ -0.21
SMIM7-218ENST00000599872 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
SMIM7-218ENST00000599872 SNAPC4Q5SXM2 1469 aa13.75□□□□□ -0.21
SMIM7-218ENST00000599872 ABCC8Q09428 1581 aa13.75□□□□□ -0.21
SMIM7-218ENST00000599872 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
SMIM7-218ENST00000599872 RAD54L2Q9Y4B4 1467 aa13.73□□□□□ -0.21
SMIM7-218ENST00000599872 KDM4FA0A1W2PPD8 638 aa13.72□□□□□ -0.21
SMIM7-218ENST00000599872 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
SMIM7-218ENST00000599872 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
SMIM7-218ENST00000599872 SOGA1O94964 1423 aa13.65□□□□□ -0.22
SMIM7-218ENST00000599872 ERCC6L2Q5T890 1561 aa13.64□□□□□ -0.23
SMIM7-218ENST00000599872 MAGI1Q96QZ7 1491 aaPredicted RBP13.63□□□□□ -0.23
SMIM7-218ENST00000599872 KIF13AQ9H1H9 1805 aa13.62□□□□□ -0.23
SMIM7-218ENST00000599872 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
SMIM7-218ENST00000599872 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
SMIM7-218ENST00000599872 FAM69CQ0P6D2 419 aa13.55□□□□□ -0.24
SMIM7-218ENST00000599872 FGD5Q6ZNL6 1462 aa13.54□□□□□ -0.24
SMIM7-218ENST00000599872 FOXD1Q16676 465 aa13.53□□□□□ -0.24
SMIM7-218ENST00000599872 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
SMIM7-218ENST00000599872 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
SMIM7-218ENST00000599872 KDM6BO15054 1643 aa13.47□□□□□ -0.25
SMIM7-218ENST00000599872 ABCC10Q5T3U5 1492 aa13.47□□□□□ -0.25
SMIM7-218ENST00000599872 PBRM1Q86U86 1689 aa13.47□□□□□ -0.25
SMIM7-218ENST00000599872 HECW2Q9P2P5 1572 aa13.44□□□□□ -0.26
SMIM7-218ENST00000599872 CUX1P39880 1505 aa13.42□□□□□ -0.26
SMIM7-218ENST00000599872 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
SMIM7-218ENST00000599872 FBXO41Q8TF61 875 aa13.4□□□□□ -0.26
SMIM7-218ENST00000599872 ADGRL1O94910 1474 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms