RNA–Protein interactions for RNA: ENST00000599804.5

SMG9-209, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-209ENST00000599804 NISCHQ9Y2I1 1504 aa39.19■■■■□ 3.86
SMG9-209ENST00000599804 CCDC180Q9P1Z9 1646 aa34.72■■■■□ 3.15
SMG9-209ENST00000599804 ABCC9O60706 1549 aa33.25■■■□□ 2.91
SMG9-209ENST00000599804 ZCCHC6Q5VYS8 1495 aaKnown RBP32.78■■■□□ 2.84
SMG9-209ENST00000599804 DCAF1Q9Y4B6 1507 aa32.52■■■□□ 2.8
SMG9-209ENST00000599804 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
SMG9-209ENST00000599804 NACADO15069 1562 aa32.45■■■□□ 2.79
SMG9-209ENST00000599804 DCAF8L2P0C7V8 631 aa32.39■■■□□ 2.78
SMG9-209ENST00000599804 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
SMG9-209ENST00000599804 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
SMG9-209ENST00000599804 SCRIBQ14160 1630 aa31.6■■■□□ 2.65
SMG9-209ENST00000599804 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
SMG9-209ENST00000599804 SHROOM4Q9ULL8 1493 aa31.16■■■□□ 2.58
SMG9-209ENST00000599804 PABPN1Q86U42 306 aaKnown RBP eCLIP31.09■■■□□ 2.57
SMG9-209ENST00000599804 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
SMG9-209ENST00000599804 CECR2Q9BXF3 1484 aa30.39■■■□□ 2.46
SMG9-209ENST00000599804 BAZ1AQ9NRL2 1556 aaPredicted RBP30.38■■■□□ 2.45
SMG9-209ENST00000599804 SMARCA4P51532 1647 aa30.33■■■□□ 2.45
SMG9-209ENST00000599804 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
SMG9-209ENST00000599804 MROH2BQ7Z745 1585 aa30.17■■■□□ 2.42
SMG9-209ENST00000599804 PEG3Q9GZU2 1588 aa30.05■■■□□ 2.4
SMG9-209ENST00000599804 SMARCA2P51531 1590 aa30.03■■■□□ 2.4
SMG9-209ENST00000599804 RSF1Q96T23 1441 aaPredicted RBP30.02■■■□□ 2.4
SMG9-209ENST00000599804 ATAD2BQ9ULI0 1458 aa29.97■■■□□ 2.39
SMG9-209ENST00000599804 WIZO95785 1651 aa29.92■■■□□ 2.38
SMG9-209ENST00000599804 DNAJC5BQ9UF47 199 aa29.9■■■□□ 2.38
SMG9-209ENST00000599804 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
SMG9-209ENST00000599804 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
SMG9-209ENST00000599804 BAZ1BQ9UIG0 1483 aaKnown RBP29.77■■■□□ 2.36
SMG9-209ENST00000599804 TOP2AP11388 1531 aaKnown RBP29.66■■■□□ 2.34
SMG9-209ENST00000599804 SUPT5HO00267 1087 aaKnown RBP29.61■■■□□ 2.33
SMG9-209ENST00000599804 CCDC88BA6NC98 1476 aa29.24■■■□□ 2.27
SMG9-209ENST00000599804 LAMC3Q9Y6N6 1575 aa29.07■■■□□ 2.24
SMG9-209ENST00000599804 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.24
SMG9-209ENST00000599804 PRDM2Q13029 1718 aa29■■■□□ 2.23
SMG9-209ENST00000599804 CFTRP13569 1480 aa28.98■■■□□ 2.23
SMG9-209ENST00000599804 NESP48681 1621 aa28.93■■■□□ 2.22
SMG9-209ENST00000599804 PDS5BQ9NTI5 1447 aa28.8■■■□□ 2.2
SMG9-209ENST00000599804 KIF21AQ7Z4S6 1674 aa28.74■■■□□ 2.19
SMG9-209ENST00000599804 FANCD2Q9BXW9 1451 aa28.7■■■□□ 2.18
SMG9-209ENST00000599804 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
SMG9-209ENST00000599804 CEP164Q9UPV0 1460 aa28.64■■■□□ 2.17
SMG9-209ENST00000599804 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
SMG9-209ENST00000599804 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
SMG9-209ENST00000599804 ABCC8Q09428 1581 aa28.41■■■□□ 2.14
SMG9-209ENST00000599804 WDR62O43379 1518 aa28.38■■■□□ 2.13
SMG9-209ENST00000599804 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
SMG9-209ENST00000599804 URB2Q14146 1524 aaKnown RBP28.36■■■□□ 2.13
SMG9-209ENST00000599804 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
SMG9-209ENST00000599804 TOPBP1Q92547 1522 aa28.31■■■□□ 2.12
SMG9-209ENST00000599804 CUX1P39880 1505 aa28.29■■■□□ 2.12
SMG9-209ENST00000599804 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
SMG9-209ENST00000599804 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
SMG9-209ENST00000599804 SYNJ1O43426 1573 aa28.23■■■□□ 2.11
SMG9-209ENST00000599804 CUX2O14529 1486 aa28.21■■■□□ 2.11
SMG9-209ENST00000599804 FGD5Q6ZNL6 1462 aa28.11■■■□□ 2.09
SMG9-209ENST00000599804 POLA1P09884 1462 aaPredicted RBP28.1■■■□□ 2.09
SMG9-209ENST00000599804 IFT140Q96RY7 1462 aa28.01■■■□□ 2.07
SMG9-209ENST00000599804 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
SMG9-209ENST00000599804 TARBP1Q13395 1621 aaKnown RBP27.99■■■□□ 2.07
SMG9-209ENST00000599804 CHIC1Q5VXU3 224 aa27.98■■■□□ 2.07
SMG9-209ENST00000599804 SOGA1O94964 1423 aa27.98■■■□□ 2.07
SMG9-209ENST00000599804 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
SMG9-209ENST00000599804 RAD54L2Q9Y4B4 1467 aa27.92■■■□□ 2.06
SMG9-209ENST00000599804 ABCA10Q8WWZ4 1543 aa27.9■■■□□ 2.06
SMG9-209ENST00000599804 EIF4G3O43432 1585 aaKnown RBP27.77■■■□□ 2.04
SMG9-209ENST00000599804 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
SMG9-209ENST00000599804 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
SMG9-209ENST00000599804 KIF27Q86VH2 1401 aa27.7■■■□□ 2.03
SMG9-209ENST00000599804 PBRM1Q86U86 1689 aa27.7■■■□□ 2.02
SMG9-209ENST00000599804 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
SMG9-209ENST00000599804 GAPVD1Q14C86 1478 aa27.69■■■□□ 2.02
SMG9-209ENST00000599804 AQRO60306 1485 aaKnown RBP eCLIP27.68■■■□□ 2.02
SMG9-209ENST00000599804 GRIN2BQ13224 1484 aa27.62■■■□□ 2.01
SMG9-209ENST00000599804 ERICH3Q5RHP9 1530 aa27.61■■■□□ 2.01
SMG9-209ENST00000599804 EEA1Q15075 1411 aa27.59■■■□□ 2.01
SMG9-209ENST00000599804 RUSC2Q8N2Y8 1516 aa27.53■■■□□ 2
SMG9-209ENST00000599804 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■■□□ 2
SMG9-209ENST00000599804 CUL7Q14999 1698 aa27.51■■□□□ 1.99
SMG9-209ENST00000599804 SNAPC4Q5SXM2 1469 aa27.48■■□□□ 1.99
SMG9-209ENST00000599804 IGF1RP08069 1367 aa27.47■■□□□ 1.99
SMG9-209ENST00000599804 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
SMG9-209ENST00000599804 FHAD1B1AJZ9 1412 aa27.39■■□□□ 1.97
SMG9-209ENST00000599804 SYNJ2O15056 1496 aa27.38■■□□□ 1.97
SMG9-209ENST00000599804 CSRNP3Q8WYN3 585 aa27.37■■□□□ 1.97
SMG9-209ENST00000599804 CHD1O14646 1710 aa27.36■■□□□ 1.97
SMG9-209ENST00000599804 CARMIL1Q5VZK9 1371 aa27.34■■□□□ 1.97
SMG9-209ENST00000599804 FAM9AQ8IZU1 332 aaPredicted RBP27.32■■□□□ 1.96
SMG9-209ENST00000599804 PRXQ9BXM0 1461 aa27.3■■□□□ 1.96
SMG9-209ENST00000599804 KIF21BO75037 1637 aa27.27■■□□□ 1.96
SMG9-209ENST00000599804 RAPGEF2Q9Y4G8 1499 aa27.27■■□□□ 1.96
SMG9-209ENST00000599804 GRIN2AQ12879 1464 aa27.26■■□□□ 1.95
SMG9-209ENST00000599804 CHMP7Q8WUX9 453 aaPredicted RBP27.26■■□□□ 1.95
SMG9-209ENST00000599804 FBLN2P98095 1184 aa27.21■■□□□ 1.95
SMG9-209ENST00000599804 GOLGA3Q08378 1498 aa27.12■■□□□ 1.93
SMG9-209ENST00000599804 NUP160Q12769 1436 aa27.11■■□□□ 1.93
SMG9-209ENST00000599804 CTTNBP2Q8WZ74 1663 aa27.1■■□□□ 1.93
SMG9-209ENST00000599804 CEP170Q5SW79 1584 aa27.09■■□□□ 1.93
SMG9-209ENST00000599804 OSCARQ8IYS5 282 aa27.06■■□□□ 1.92
SMG9-209ENST00000599804 CLASP1Q7Z460 1538 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms