RNA–Protein interactions for RNA: ENST00000599735.3

LINC02028-213, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 726 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-213ENST00000599735 NISCHQ9Y2I1 1504 aa30.96■■■□□ 2.55
LINC02028-213ENST00000599735 ABCC9O60706 1549 aa27.82■■■□□ 2.04
LINC02028-213ENST00000599735 CCDC180Q9P1Z9 1646 aa27.79■■■□□ 2.04
LINC02028-213ENST00000599735 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
LINC02028-213ENST00000599735 NACADO15069 1562 aa26.37■■□□□ 1.81
LINC02028-213ENST00000599735 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
LINC02028-213ENST00000599735 DCAF8L2P0C7V8 631 aa26.11■■□□□ 1.77
LINC02028-213ENST00000599735 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
LINC02028-213ENST00000599735 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
LINC02028-213ENST00000599735 UNC13AQ9UPW8 1703 aa25.77■■□□□ 1.72
LINC02028-213ENST00000599735 BICRAQ9NZM4 1560 aa25.71■■□□□ 1.71
LINC02028-213ENST00000599735 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
LINC02028-213ENST00000599735 ZCCHC6Q5VYS8 1495 aaKnown RBP25.62■■□□□ 1.69
LINC02028-213ENST00000599735 SHROOM4Q9ULL8 1493 aa25.51■■□□□ 1.67
LINC02028-213ENST00000599735 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
LINC02028-213ENST00000599735 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
LINC02028-213ENST00000599735 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
LINC02028-213ENST00000599735 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
LINC02028-213ENST00000599735 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
LINC02028-213ENST00000599735 DNAJC5Q9H3Z4 198 aa24.27■■□□□ 1.48
LINC02028-213ENST00000599735 ATAD2BQ9ULI0 1458 aa24.22■■□□□ 1.47
LINC02028-213ENST00000599735 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
LINC02028-213ENST00000599735 CUX2O14529 1486 aa24.13■■□□□ 1.45
LINC02028-213ENST00000599735 HMGXB3Q12766 1538 aa24.13■■□□□ 1.45
LINC02028-213ENST00000599735 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
LINC02028-213ENST00000599735 ERCC6Q03468 1493 aa24.06■■□□□ 1.44
LINC02028-213ENST00000599735 BAZ1AQ9NRL2 1556 aaPredicted RBP24.04■■□□□ 1.44
LINC02028-213ENST00000599735 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
LINC02028-213ENST00000599735 BAZ1BQ9UIG0 1483 aaKnown RBP23.95■■□□□ 1.42
LINC02028-213ENST00000599735 NESP48681 1621 aa23.86■■□□□ 1.41
LINC02028-213ENST00000599735 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
LINC02028-213ENST00000599735 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
LINC02028-213ENST00000599735 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
LINC02028-213ENST00000599735 THOC2Q8NI27 1593 aaKnown RBP23.65■■□□□ 1.38
LINC02028-213ENST00000599735 CADPSQ9ULU8 1353 aa23.62■■□□□ 1.37
LINC02028-213ENST00000599735 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
LINC02028-213ENST00000599735 WIZO95785 1651 aa23.45■■□□□ 1.34
LINC02028-213ENST00000599735 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
LINC02028-213ENST00000599735 WDR62O43379 1518 aa23.37■■□□□ 1.33
LINC02028-213ENST00000599735 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.32
LINC02028-213ENST00000599735 CFTRP13569 1480 aa23.31■■□□□ 1.32
LINC02028-213ENST00000599735 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
LINC02028-213ENST00000599735 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
LINC02028-213ENST00000599735 TOP2AP11388 1531 aaKnown RBP23.22■■□□□ 1.31
LINC02028-213ENST00000599735 OSCARQ8IYS5 282 aa23.06■■□□□ 1.28
LINC02028-213ENST00000599735 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
LINC02028-213ENST00000599735 TRIM41Q8WV44 630 aa23■■□□□ 1.27
LINC02028-213ENST00000599735 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
LINC02028-213ENST00000599735 PRDM2Q13029 1718 aa22.93■■□□□ 1.26
LINC02028-213ENST00000599735 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
LINC02028-213ENST00000599735 ABCC8Q09428 1581 aa22.88■■□□□ 1.25
LINC02028-213ENST00000599735 TOPBP1Q92547 1522 aa22.82■■□□□ 1.24
LINC02028-213ENST00000599735 ZNF608Q9ULD9 1512 aaPredicted RBP22.77■■□□□ 1.24
LINC02028-213ENST00000599735 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
LINC02028-213ENST00000599735 EIF4G3O43432 1585 aaKnown RBP22.61■■□□□ 1.21
LINC02028-213ENST00000599735 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
LINC02028-213ENST00000599735 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
LINC02028-213ENST00000599735 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
LINC02028-213ENST00000599735 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
LINC02028-213ENST00000599735 AQRO60306 1485 aaKnown RBP eCLIP22.58■■□□□ 1.2
LINC02028-213ENST00000599735 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.2
LINC02028-213ENST00000599735 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
LINC02028-213ENST00000599735 SOGA1O94964 1423 aa22.51■■□□□ 1.19
LINC02028-213ENST00000599735 RAD54L2Q9Y4B4 1467 aa22.46■■□□□ 1.19
LINC02028-213ENST00000599735 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
LINC02028-213ENST00000599735 CYB5RLQ6IPT4 315 aa22.45■■□□□ 1.18
LINC02028-213ENST00000599735 FBLN2P98095 1184 aa22.44■■□□□ 1.18
LINC02028-213ENST00000599735 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
LINC02028-213ENST00000599735 CHD1O14646 1710 aa22.42■■□□□ 1.18
LINC02028-213ENST00000599735 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
LINC02028-213ENST00000599735 CUX1P39880 1505 aa22.36■■□□□ 1.17
LINC02028-213ENST00000599735 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
LINC02028-213ENST00000599735 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
LINC02028-213ENST00000599735 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
LINC02028-213ENST00000599735 GRIN2BQ13224 1484 aa22.33■■□□□ 1.16
LINC02028-213ENST00000599735 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
LINC02028-213ENST00000599735 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
LINC02028-213ENST00000599735 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
LINC02028-213ENST00000599735 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
LINC02028-213ENST00000599735 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
LINC02028-213ENST00000599735 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
LINC02028-213ENST00000599735 TRHP20396 242 aaPredicted RBP22.2■■□□□ 1.14
LINC02028-213ENST00000599735 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
LINC02028-213ENST00000599735 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
LINC02028-213ENST00000599735 ABCA5Q8WWZ7 1642 aa22.1■■□□□ 1.13
LINC02028-213ENST00000599735 PBRM1Q86U86 1689 aa22.09■■□□□ 1.13
LINC02028-213ENST00000599735 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
LINC02028-213ENST00000599735 TOP2BQ02880 1626 aa22■■□□□ 1.11
LINC02028-213ENST00000599735 NUP160Q12769 1436 aa21.98■■□□□ 1.11
LINC02028-213ENST00000599735 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
LINC02028-213ENST00000599735 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
LINC02028-213ENST00000599735 ADAMTS12P58397 1594 aa21.93■■□□□ 1.1
LINC02028-213ENST00000599735 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
LINC02028-213ENST00000599735 CEP170Q5SW79 1584 aa21.88■■□□□ 1.09
LINC02028-213ENST00000599735 SHROOM2Q13796 1616 aa21.84■■□□□ 1.09
LINC02028-213ENST00000599735 ERCC6L2Q5T890 1561 aa21.83■■□□□ 1.09
LINC02028-213ENST00000599735 JPH4Q96JJ6 628 aa21.79■■□□□ 1.08
LINC02028-213ENST00000599735 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
LINC02028-213ENST00000599735 IGF1RP08069 1367 aa21.65■■□□□ 1.06
LINC02028-213ENST00000599735 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms