RNA–Protein interactions for RNA: ENST00000599712.1

SAMD4B-209, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 4

Gene SAMD4B, Length 925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-209ENST00000599712 NISCHQ9Y2I1 1504 aa31.83■■■□□ 2.69
SAMD4B-209ENST00000599712 CCDC180Q9P1Z9 1646 aa28.35■■■□□ 2.13
SAMD4B-209ENST00000599712 ABCC9O60706 1549 aa27.89■■■□□ 2.06
SAMD4B-209ENST00000599712 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
SAMD4B-209ENST00000599712 NACADO15069 1562 aa26.72■■□□□ 1.87
SAMD4B-209ENST00000599712 DCAF8L2P0C7V8 631 aa26.59■■□□□ 1.85
SAMD4B-209ENST00000599712 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
SAMD4B-209ENST00000599712 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
SAMD4B-209ENST00000599712 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
SAMD4B-209ENST00000599712 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.78
SAMD4B-209ENST00000599712 PABPN1Q86U42 306 aaKnown RBP eCLIP26.05■■□□□ 1.76
SAMD4B-209ENST00000599712 BICRAQ9NZM4 1560 aa26■■□□□ 1.75
SAMD4B-209ENST00000599712 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
SAMD4B-209ENST00000599712 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
SAMD4B-209ENST00000599712 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
SAMD4B-209ENST00000599712 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
SAMD4B-209ENST00000599712 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
SAMD4B-209ENST00000599712 CECR2Q9BXF3 1484 aa25.1■■□□□ 1.61
SAMD4B-209ENST00000599712 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
SAMD4B-209ENST00000599712 NCAPD3P42695 1498 aa24.69■■□□□ 1.54
SAMD4B-209ENST00000599712 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
SAMD4B-209ENST00000599712 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
SAMD4B-209ENST00000599712 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
SAMD4B-209ENST00000599712 PEG3Q9GZU2 1588 aa24.52■■□□□ 1.52
SAMD4B-209ENST00000599712 HMGXB3Q12766 1538 aa24.51■■□□□ 1.51
SAMD4B-209ENST00000599712 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
SAMD4B-209ENST00000599712 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
SAMD4B-209ENST00000599712 WIZO95785 1651 aa24.21■■□□□ 1.47
SAMD4B-209ENST00000599712 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
SAMD4B-209ENST00000599712 NESP48681 1621 aa24.1■■□□□ 1.45
SAMD4B-209ENST00000599712 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
SAMD4B-209ENST00000599712 LAMC3Q9Y6N6 1575 aa24.03■■□□□ 1.44
SAMD4B-209ENST00000599712 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
SAMD4B-209ENST00000599712 CADPSQ9ULU8 1353 aa23.94■■□□□ 1.42
SAMD4B-209ENST00000599712 CUX2O14529 1486 aa23.9■■□□□ 1.42
SAMD4B-209ENST00000599712 PDS5BQ9NTI5 1447 aa23.88■■□□□ 1.41
SAMD4B-209ENST00000599712 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
SAMD4B-209ENST00000599712 THOC2Q8NI27 1593 aaKnown RBP23.77■■□□□ 1.4
SAMD4B-209ENST00000599712 CFTRP13569 1480 aa23.76■■□□□ 1.39
SAMD4B-209ENST00000599712 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
SAMD4B-209ENST00000599712 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
SAMD4B-209ENST00000599712 MRC2Q9UBG0 1479 aa23.63■■□□□ 1.37
SAMD4B-209ENST00000599712 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
SAMD4B-209ENST00000599712 WDR62O43379 1518 aa23.57■■□□□ 1.36
SAMD4B-209ENST00000599712 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
SAMD4B-209ENST00000599712 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
SAMD4B-209ENST00000599712 URB2Q14146 1524 aaKnown RBP23.42■■□□□ 1.34
SAMD4B-209ENST00000599712 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
SAMD4B-209ENST00000599712 ABCC8Q09428 1581 aa23.25■■□□□ 1.31
SAMD4B-209ENST00000599712 TOPBP1Q92547 1522 aa23.24■■□□□ 1.31
SAMD4B-209ENST00000599712 DNMBPQ6XZF7 1577 aa23.19■■□□□ 1.3
SAMD4B-209ENST00000599712 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
SAMD4B-209ENST00000599712 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
SAMD4B-209ENST00000599712 POLA1P09884 1462 aaPredicted RBP23.04■■□□□ 1.28
SAMD4B-209ENST00000599712 TARBP1Q13395 1621 aaKnown RBP23.01■■□□□ 1.27
SAMD4B-209ENST00000599712 CUX1P39880 1505 aa23.01■■□□□ 1.27
SAMD4B-209ENST00000599712 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
SAMD4B-209ENST00000599712 SOGA1O94964 1423 aa22.94■■□□□ 1.26
SAMD4B-209ENST00000599712 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
SAMD4B-209ENST00000599712 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
SAMD4B-209ENST00000599712 AQRO60306 1485 aaKnown RBP eCLIP22.9■■□□□ 1.267e-6■□□□□ 9.9
SAMD4B-209ENST00000599712 OSCARQ8IYS5 282 aa22.89■■□□□ 1.25
SAMD4B-209ENST00000599712 TDRD9Q8NDG6 1382 aaKnown RBP22.83■■□□□ 1.25
SAMD4B-209ENST00000599712 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
SAMD4B-209ENST00000599712 WRNQ14191 1432 aaPredicted RBP eCLIP22.78■■□□□ 1.24
SAMD4B-209ENST00000599712 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
SAMD4B-209ENST00000599712 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
SAMD4B-209ENST00000599712 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
SAMD4B-209ENST00000599712 SYNJ1O43426 1573 aa22.72■■□□□ 1.23
SAMD4B-209ENST00000599712 GRIN2BQ13224 1484 aa22.69■■□□□ 1.22
SAMD4B-209ENST00000599712 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
SAMD4B-209ENST00000599712 SNAPC4Q5SXM2 1469 aa22.66■■□□□ 1.22
SAMD4B-209ENST00000599712 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
SAMD4B-209ENST00000599712 CHD1O14646 1710 aa22.65■■□□□ 1.22
SAMD4B-209ENST00000599712 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.21
SAMD4B-209ENST00000599712 FBLN2P98095 1184 aa22.61■■□□□ 1.21
SAMD4B-209ENST00000599712 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
SAMD4B-209ENST00000599712 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
SAMD4B-209ENST00000599712 CHMP7Q8WUX9 453 aaPredicted RBP22.57■■□□□ 1.2
SAMD4B-209ENST00000599712 RIMBP3CA6NJZ7 1639 aa22.5■■□□□ 1.19
SAMD4B-209ENST00000599712 RIMBP3BA6NNM3 1639 aa22.5■■□□□ 1.19
SAMD4B-209ENST00000599712 RIMBP3Q9UFD9 1639 aa22.5■■□□□ 1.19
SAMD4B-209ENST00000599712 ARHGEF11O15085 1522 aa22.49■■□□□ 1.19
SAMD4B-209ENST00000599712 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
SAMD4B-209ENST00000599712 CLASP1Q7Z460 1538 aa22.47■■□□□ 1.19
SAMD4B-209ENST00000599712 ERICH3Q5RHP9 1530 aa22.46■■□□□ 1.19
SAMD4B-209ENST00000599712 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
SAMD4B-209ENST00000599712 FHAD1B1AJZ9 1412 aa22.41■■□□□ 1.18
SAMD4B-209ENST00000599712 GRIN2AQ12879 1464 aa22.4■■□□□ 1.18
SAMD4B-209ENST00000599712 NUP160Q12769 1436 aa22.33■■□□□ 1.17
SAMD4B-209ENST00000599712 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
SAMD4B-209ENST00000599712 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
SAMD4B-209ENST00000599712 IGF1RP08069 1367 aa22.3■■□□□ 1.16
SAMD4B-209ENST00000599712 CYB5RLQ6IPT4 315 aa22.3■■□□□ 1.16
SAMD4B-209ENST00000599712 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
SAMD4B-209ENST00000599712 CUL7Q14999 1698 aa22.19■■□□□ 1.14
SAMD4B-209ENST00000599712 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
SAMD4B-209ENST00000599712 CARMIL1Q5VZK9 1371 aa22.13■■□□□ 1.13
SAMD4B-209ENST00000599712 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
SAMD4B-209ENST00000599712 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms