RNA–Protein interactions for RNA: ENST00000599662.1

CEACAM3-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 5

Gene CEACAM3, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-207ENST00000599662 NISCHQ9Y2I1 1504 aa51.59■■■■■ 5.85
CEACAM3-207ENST00000599662 CCDC180Q9P1Z9 1646 aa46.28■■■■■ 5
CEACAM3-207ENST00000599662 ABCC9O60706 1549 aa45.94■■■■■ 4.95
CEACAM3-207ENST00000599662 RB1CC1Q8TDY2 1594 aa43.87■■■■■ 4.61
CEACAM3-207ENST00000599662 DCAF8L2P0C7V8 631 aa43.58■■■■■ 4.57
CEACAM3-207ENST00000599662 NACADO15069 1562 aa43.57■■■■■ 4.57
CEACAM3-207ENST00000599662 UNC13AQ9UPW8 1703 aa43.09■■■■■ 4.49
CEACAM3-207ENST00000599662 MYO15BQ96JP2 1530 aa42.92■■■■■ 4.46
CEACAM3-207ENST00000599662 ZCCHC6Q5VYS8 1495 aaKnown RBP42.82■■■■■ 4.45
CEACAM3-207ENST00000599662 PABPN1Q86U42 306 aaKnown RBP eCLIP42.77■■■■■ 4.44
CEACAM3-207ENST00000599662 DNAJC5BQ9UF47 199 aa42.61■■■■■ 4.41
CEACAM3-207ENST00000599662 DCAF1Q9Y4B6 1507 aa42.55■■■■■ 4.4
CEACAM3-207ENST00000599662 BICRAQ9NZM4 1560 aa42.51■■■■■ 4.4
CEACAM3-207ENST00000599662 SCRIBQ14160 1630 aa42.28■■■■■ 4.36
CEACAM3-207ENST00000599662 SHROOM4Q9ULL8 1493 aa41.86■■■■■ 4.29
CEACAM3-207ENST00000599662 CC2D2AQ9P2K1 1620 aa41.53■■■■■ 4.24
CEACAM3-207ENST00000599662 EIF4G1Q04637 1599 aaKnown RBP41.48■■■■■ 4.23
CEACAM3-207ENST00000599662 CECR2Q9BXF3 1484 aa41.28■■■■■ 4.2
CEACAM3-207ENST00000599662 SMARCA4P51532 1647 aa40.28■■■■■ 4.04
CEACAM3-207ENST00000599662 NCAPD3P42695 1498 aa40.1■■■■■ 4.01
CEACAM3-207ENST00000599662 ATAD2BQ9ULI0 1458 aa40.1■■■■■ 4.01
CEACAM3-207ENST00000599662 SMARCA2P51531 1590 aa40.09■■■■■ 4.01
CEACAM3-207ENST00000599662 BAZ1AQ9NRL2 1556 aaPredicted RBP40.08■■■■■ 4.01
CEACAM3-207ENST00000599662 HMGXB3Q12766 1538 aa39.95■■■■□ 3.99
CEACAM3-207ENST00000599662 BAZ1BQ9UIG0 1483 aaKnown RBP39.84■■■■□ 3.97
CEACAM3-207ENST00000599662 MROH2BQ7Z745 1585 aa39.8■■■■□ 3.96
CEACAM3-207ENST00000599662 PEG3Q9GZU2 1588 aa39.75■■■■□ 3.95
CEACAM3-207ENST00000599662 ERCC6Q03468 1493 aa39.68■■■■□ 3.94
CEACAM3-207ENST00000599662 NESP48681 1621 aa39.54■■■■□ 3.92
CEACAM3-207ENST00000599662 WIZO95785 1651 aa39.48■■■■□ 3.91
CEACAM3-207ENST00000599662 CUX2O14529 1486 aa39.35■■■■□ 3.89
CEACAM3-207ENST00000599662 LAMC3Q9Y6N6 1575 aa39.31■■■■□ 3.88
CEACAM3-207ENST00000599662 KIF21AQ7Z4S6 1674 aa39.22■■■■□ 3.87
CEACAM3-207ENST00000599662 THOC2Q8NI27 1593 aaKnown RBP39.09■■■■□ 3.85
CEACAM3-207ENST00000599662 RSF1Q96T23 1441 aaPredicted RBP39.02■■■■□ 3.84
CEACAM3-207ENST00000599662 PDS5BQ9NTI5 1447 aa39.01■■■■□ 3.84
CEACAM3-207ENST00000599662 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
CEACAM3-207ENST00000599662 TOP2AP11388 1531 aaKnown RBP38.89■■■■□ 3.82
CEACAM3-207ENST00000599662 DNAJC5Q9H3Z4 198 aa38.87■■■■□ 3.81
CEACAM3-207ENST00000599662 MRC2Q9UBG0 1479 aa38.69■■■■□ 3.78
CEACAM3-207ENST00000599662 CEP164Q9UPV0 1460 aa38.65■■■■□ 3.78
CEACAM3-207ENST00000599662 FANCD2Q9BXW9 1451 aa38.6■■■■□ 3.77
CEACAM3-207ENST00000599662 PRDM2Q13029 1718 aa38.58■■■■□ 3.77
CEACAM3-207ENST00000599662 CFTRP13569 1480 aa38.57■■■■□ 3.76
CEACAM3-207ENST00000599662 WDR62O43379 1518 aa38.57■■■■□ 3.76
CEACAM3-207ENST00000599662 CCDC88BA6NC98 1476 aa38.4■■■■□ 3.74
CEACAM3-207ENST00000599662 URB2Q14146 1524 aaKnown RBP38.25■■■■□ 3.71
CEACAM3-207ENST00000599662 TOPBP1Q92547 1522 aa37.91■■■■□ 3.66
CEACAM3-207ENST00000599662 DNMBPQ6XZF7 1577 aa37.84■■■■□ 3.65
CEACAM3-207ENST00000599662 ABCC8Q09428 1581 aa37.8■■■■□ 3.64
CEACAM3-207ENST00000599662 IFT140Q96RY7 1462 aa37.79■■■■□ 3.64
CEACAM3-207ENST00000599662 ZNF608Q9ULD9 1512 aaPredicted RBP37.73■■■■□ 3.63
CEACAM3-207ENST00000599662 SUPT5HO00267 1087 aaKnown RBP37.73■■■■□ 3.63
CEACAM3-207ENST00000599662 EIF4G3O43432 1585 aaKnown RBP37.65■■■■□ 3.62
CEACAM3-207ENST00000599662 OSCARQ8IYS5 282 aa37.6■■■■□ 3.61
CEACAM3-207ENST00000599662 TARBP1Q13395 1621 aaKnown RBP37.57■■■■□ 3.6
CEACAM3-207ENST00000599662 TRIM41Q8WV44 630 aa37.55■■■■□ 3.6
CEACAM3-207ENST00000599662 POLA1P09884 1462 aaPredicted RBP37.52■■■■□ 3.6
CEACAM3-207ENST00000599662 CHD1O14646 1710 aa37.44■■■■□ 3.58
CEACAM3-207ENST00000599662 AQRO60306 1485 aaKnown RBP eCLIP37.42■■■■□ 3.58
CEACAM3-207ENST00000599662 RAD54L2Q9Y4B4 1467 aa37.41■■■■□ 3.58
CEACAM3-207ENST00000599662 CUX1P39880 1505 aa37.38■■■■□ 3.57
CEACAM3-207ENST00000599662 FGD5Q6ZNL6 1462 aa37.38■■■■□ 3.57
CEACAM3-207ENST00000599662 SOGA1O94964 1423 aa37.35■■■■□ 3.57
CEACAM3-207ENST00000599662 TDRD9Q8NDG6 1382 aaKnown RBP37.25■■■■□ 3.55
CEACAM3-207ENST00000599662 RIMBP3CA6NJZ7 1639 aa37.24■■■■□ 3.55
CEACAM3-207ENST00000599662 RIMBP3BA6NNM3 1639 aa37.24■■■■□ 3.55
CEACAM3-207ENST00000599662 RIMBP3Q9UFD9 1639 aa37.24■■■■□ 3.55
CEACAM3-207ENST00000599662 FBLN2P98095 1184 aa37.22■■■■□ 3.55
CEACAM3-207ENST00000599662 WDR97A6NE52 1622 aa37.19■■■■□ 3.54
CEACAM3-207ENST00000599662 PBRM1Q86U86 1689 aa37.12■■■■□ 3.53
CEACAM3-207ENST00000599662 SNAPC4Q5SXM2 1469 aa37.1■■■■□ 3.53
CEACAM3-207ENST00000599662 ARHGEF11O15085 1522 aa37.07■■■■□ 3.53
CEACAM3-207ENST00000599662 GRIN2BQ13224 1484 aa37■■■■□ 3.51
CEACAM3-207ENST00000599662 BIVM-ERCC5R4GMW8 1640 aa36.96■■■■□ 3.51
CEACAM3-207ENST00000599662 MAGI1Q96QZ7 1491 aaPredicted RBP36.95■■■■□ 3.51
CEACAM3-207ENST00000599662 GAPVD1Q14C86 1478 aa36.94■■■■□ 3.5
CEACAM3-207ENST00000599662 CHMP7Q8WUX9 453 aaPredicted RBP36.92■■■■□ 3.5
CEACAM3-207ENST00000599662 TOP2BQ02880 1626 aa36.91■■■■□ 3.5
CEACAM3-207ENST00000599662 ABCA5Q8WWZ7 1642 aa36.91■■■■□ 3.5
CEACAM3-207ENST00000599662 SYNJ1O43426 1573 aa36.91■■■■□ 3.5
CEACAM3-207ENST00000599662 ABCA10Q8WWZ4 1543 aa36.9■■■■□ 3.5
CEACAM3-207ENST00000599662 WRNQ14191 1432 aaPredicted RBP eCLIP36.87■■■■□ 3.49
CEACAM3-207ENST00000599662 SYNJ2O15056 1496 aa36.83■■■■□ 3.49
CEACAM3-207ENST00000599662 CLASP1Q7Z460 1538 aa36.77■■■■□ 3.48
CEACAM3-207ENST00000599662 CYB5RLQ6IPT4 315 aa36.77■■■■□ 3.48
CEACAM3-207ENST00000599662 ARAP1Q96P48 1450 aa36.7■■■■□ 3.47
CEACAM3-207ENST00000599662 ADAMTS12P58397 1594 aa36.62■■■■□ 3.45
CEACAM3-207ENST00000599662 GRIN2AQ12879 1464 aa36.54■■■■□ 3.44
CEACAM3-207ENST00000599662 ERICH3Q5RHP9 1530 aa36.48■■■■□ 3.43
CEACAM3-207ENST00000599662 CEP170Q5SW79 1584 aa36.44■■■■□ 3.42
CEACAM3-207ENST00000599662 FHAD1B1AJZ9 1412 aa36.43■■■■□ 3.42
CEACAM3-207ENST00000599662 TRHP20396 242 aaPredicted RBP36.36■■■■□ 3.41
CEACAM3-207ENST00000599662 NUP160Q12769 1436 aa36.32■■■■□ 3.4
CEACAM3-207ENST00000599662 ERCC6L2Q5T890 1561 aa36.28■■■■□ 3.4
CEACAM3-207ENST00000599662 SHROOM2Q13796 1616 aa36.23■■■■□ 3.39
CEACAM3-207ENST00000599662 KIF27Q86VH2 1401 aa36.15■■■■□ 3.38
CEACAM3-207ENST00000599662 CUL7Q14999 1698 aa36.14■■■■□ 3.38
CEACAM3-207ENST00000599662 RUSC2Q8N2Y8 1516 aa36.11■■■■□ 3.37
CEACAM3-207ENST00000599662 PRG4Q92954 1404 aaPredicted RBP36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms