RNA–Protein interactions for RNA: ENST00000599657.5

PAK4-210, Transcript of p21 (RAC1) activated kinase 4, humanhuman

TSL 4

Gene PAK4, Length 534 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK4-210ENST00000599657 NISCHQ9Y2I1 1504 aa46.64■■■■■ 5.06
PAK4-210ENST00000599657 CCDC180Q9P1Z9 1646 aa41.51■■■■■ 4.23
PAK4-210ENST00000599657 ABCC9O60706 1549 aa40.42■■■■■ 4.06
PAK4-210ENST00000599657 RB1CC1Q8TDY2 1594 aa38.99■■■■□ 3.83
PAK4-210ENST00000599657 NACADO15069 1562 aa38.98■■■■□ 3.83
PAK4-210ENST00000599657 ZCCHC6Q5VYS8 1495 aaKnown RBP38.86■■■■□ 3.81
PAK4-210ENST00000599657 DCAF8L2P0C7V8 631 aa38.84■■■■□ 3.81
PAK4-210ENST00000599657 MYO15BQ96JP2 1530 aa38.8■■■■□ 3.8
PAK4-210ENST00000599657 DCAF1Q9Y4B6 1507 aa38.65■■■■□ 3.78
PAK4-210ENST00000599657 UNC13AQ9UPW8 1703 aa38.15■■■■□ 3.7
PAK4-210ENST00000599657 BICRAQ9NZM4 1560 aa37.8■■■■□ 3.64
PAK4-210ENST00000599657 SCRIBQ14160 1630 aa37.77■■■■□ 3.64
PAK4-210ENST00000599657 PABPN1Q86U42 306 aaKnown RBP eCLIP37.75■■■■□ 3.63
PAK4-210ENST00000599657 SHROOM4Q9ULL8 1493 aa37.46■■■■□ 3.59
PAK4-210ENST00000599657 DNAJC5BQ9UF47 199 aa37.02■■■■□ 3.52
PAK4-210ENST00000599657 EIF4G1Q04637 1599 aaKnown RBP36.79■■■■□ 3.48
PAK4-210ENST00000599657 CC2D2AQ9P2K1 1620 aa36.62■■■■□ 3.45
PAK4-210ENST00000599657 CECR2Q9BXF3 1484 aa36.33■■■■□ 3.41
PAK4-210ENST00000599657 SMARCA4P51532 1647 aa36.18■■■■□ 3.38
PAK4-210ENST00000599657 BAZ1AQ9NRL2 1556 aaPredicted RBP36.17■■■■□ 3.38
PAK4-210ENST00000599657 NCAPD3P42695 1498 aa35.95■■■■□ 3.35
PAK4-210ENST00000599657 ATAD2BQ9ULI0 1458 aa35.95■■■■□ 3.35
PAK4-210ENST00000599657 SMARCA2P51531 1590 aa35.94■■■■□ 3.34
PAK4-210ENST00000599657 MROH2BQ7Z745 1585 aa35.92■■■■□ 3.34
PAK4-210ENST00000599657 PEG3Q9GZU2 1588 aa35.86■■■■□ 3.33
PAK4-210ENST00000599657 HMGXB3Q12766 1538 aa35.78■■■■□ 3.32
PAK4-210ENST00000599657 BAZ1BQ9UIG0 1483 aaKnown RBP35.66■■■■□ 3.3
PAK4-210ENST00000599657 WIZO95785 1651 aa35.56■■■■□ 3.28
PAK4-210ENST00000599657 RSF1Q96T23 1441 aaPredicted RBP35.54■■■■□ 3.28
PAK4-210ENST00000599657 TOP2AP11388 1531 aaKnown RBP35.19■■■■□ 3.22
PAK4-210ENST00000599657 LAMC3Q9Y6N6 1575 aa35.01■■■■□ 3.2
PAK4-210ENST00000599657 NESP48681 1621 aa35■■■■□ 3.19
PAK4-210ENST00000599657 CADPSQ9ULU8 1353 aa34.88■■■■□ 3.17
PAK4-210ENST00000599657 ERCC6Q03468 1493 aa34.84■■■■□ 3.17
PAK4-210ENST00000599657 CCDC88BA6NC98 1476 aa34.75■■■■□ 3.15
PAK4-210ENST00000599657 PDS5BQ9NTI5 1447 aa34.73■■■■□ 3.15
PAK4-210ENST00000599657 CFTRP13569 1480 aa34.7■■■■□ 3.15
PAK4-210ENST00000599657 KIF21AQ7Z4S6 1674 aa34.66■■■■□ 3.14
PAK4-210ENST00000599657 SUPT5HO00267 1087 aaKnown RBP34.61■■■■□ 3.13
PAK4-210ENST00000599657 PRDM2Q13029 1718 aa34.53■■■■□ 3.12
PAK4-210ENST00000599657 THOC2Q8NI27 1593 aaKnown RBP34.51■■■■□ 3.12
PAK4-210ENST00000599657 CUX2O14529 1486 aa34.51■■■■□ 3.11
PAK4-210ENST00000599657 FANCD2Q9BXW9 1451 aa34.47■■■■□ 3.11
PAK4-210ENST00000599657 CEP164Q9UPV0 1460 aa34.43■■■■□ 3.1
PAK4-210ENST00000599657 MRC2Q9UBG0 1479 aa34.37■■■■□ 3.09
PAK4-210ENST00000599657 WDR62O43379 1518 aa34.26■■■■□ 3.08
PAK4-210ENST00000599657 URB2Q14146 1524 aaKnown RBP34.12■■■■□ 3.05
PAK4-210ENST00000599657 ABCC8Q09428 1581 aa33.99■■■■□ 3.03
PAK4-210ENST00000599657 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
PAK4-210ENST00000599657 DNMBPQ6XZF7 1577 aa33.93■■■■□ 3.02
PAK4-210ENST00000599657 IFT140Q96RY7 1462 aa33.72■■■□□ 2.99
PAK4-210ENST00000599657 CUX1P39880 1505 aa33.69■■■□□ 2.98
PAK4-210ENST00000599657 POLA1P09884 1462 aaPredicted RBP33.64■■■□□ 2.98
PAK4-210ENST00000599657 TARBP1Q13395 1621 aaKnown RBP33.59■■■□□ 2.97
PAK4-210ENST00000599657 FGD5Q6ZNL6 1462 aa33.56■■■□□ 2.96
PAK4-210ENST00000599657 ZNF608Q9ULD9 1512 aaPredicted RBP33.52■■■□□ 2.96
PAK4-210ENST00000599657 SOGA1O94964 1423 aa33.51■■■□□ 2.95
PAK4-210ENST00000599657 WRNQ14191 1432 aaPredicted RBP eCLIP33.51■■■□□ 2.95
PAK4-210ENST00000599657 BIVM-ERCC5R4GMW8 1640 aa33.48■■■□□ 2.95
PAK4-210ENST00000599657 RAD54L2Q9Y4B4 1467 aa33.47■■■□□ 2.95
PAK4-210ENST00000599657 TOP2BQ02880 1626 aa33.46■■■□□ 2.95
PAK4-210ENST00000599657 EIF4G3O43432 1585 aaKnown RBP33.43■■■□□ 2.94
PAK4-210ENST00000599657 SYNJ1O43426 1573 aa33.42■■■□□ 2.94
PAK4-210ENST00000599657 WDR97A6NE52 1622 aa33.38■■■□□ 2.93
PAK4-210ENST00000599657 DNAJC5Q9H3Z4 198 aa33.35■■■□□ 2.93
PAK4-210ENST00000599657 AQRO60306 1485 aaKnown RBP eCLIP33.33■■■□□ 2.931e-6■■■■□ 19.7
PAK4-210ENST00000599657 TDRD9Q8NDG6 1382 aaKnown RBP33.28■■■□□ 2.92
PAK4-210ENST00000599657 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
PAK4-210ENST00000599657 ABCA5Q8WWZ7 1642 aa33.14■■■□□ 2.9
PAK4-210ENST00000599657 GRIN2BQ13224 1484 aa33.12■■■□□ 2.89
PAK4-210ENST00000599657 GAPVD1Q14C86 1478 aa33.12■■■□□ 2.89
PAK4-210ENST00000599657 PBRM1Q86U86 1689 aa33.1■■■□□ 2.89
PAK4-210ENST00000599657 OSCARQ8IYS5 282 aa33.07■■■□□ 2.88
PAK4-210ENST00000599657 SNAPC4Q5SXM2 1469 aa33.04■■■□□ 2.88
PAK4-210ENST00000599657 MAGI1Q96QZ7 1491 aaPredicted RBP33.04■■■□□ 2.88
PAK4-210ENST00000599657 CHD1O14646 1710 aa33.02■■■□□ 2.88
PAK4-210ENST00000599657 SYNJ2O15056 1496 aa32.9■■■□□ 2.86
PAK4-210ENST00000599657 ERICH3Q5RHP9 1530 aa32.89■■■□□ 2.86
PAK4-210ENST00000599657 FBLN2P98095 1184 aa32.89■■■□□ 2.86
PAK4-210ENST00000599657 CHMP7Q8WUX9 453 aaPredicted RBP32.85■■■□□ 2.85
PAK4-210ENST00000599657 ADAMTS12P58397 1594 aa32.81■■■□□ 2.84
PAK4-210ENST00000599657 KIF27Q86VH2 1401 aa32.81■■■□□ 2.84
PAK4-210ENST00000599657 FHAD1B1AJZ9 1412 aa32.76■■■□□ 2.83
PAK4-210ENST00000599657 TRIM41Q8WV44 630 aa32.73■■■□□ 2.83
PAK4-210ENST00000599657 GRIN2AQ12879 1464 aa32.69■■■□□ 2.82
PAK4-210ENST00000599657 IGF1RP08069 1367 aa32.66■■■□□ 2.82
PAK4-210ENST00000599657 CLASP1Q7Z460 1538 aa32.65■■■□□ 2.82
PAK4-210ENST00000599657 CUL7Q14999 1698 aa32.62■■■□□ 2.81
PAK4-210ENST00000599657 NUP160Q12769 1436 aa32.55■■■□□ 2.8
PAK4-210ENST00000599657 RIMBP3CA6NJZ7 1639 aa32.54■■■□□ 2.8
PAK4-210ENST00000599657 RIMBP3BA6NNM3 1639 aa32.54■■■□□ 2.8
PAK4-210ENST00000599657 RIMBP3Q9UFD9 1639 aa32.54■■■□□ 2.8
PAK4-210ENST00000599657 ARHGEF11O15085 1522 aa32.53■■■□□ 2.8
PAK4-210ENST00000599657 CEP170Q5SW79 1584 aa32.52■■■□□ 2.8
PAK4-210ENST00000599657 RUSC2Q8N2Y8 1516 aa32.49■■■□□ 2.79
PAK4-210ENST00000599657 CARMIL1Q5VZK9 1371 aa32.46■■■□□ 2.79
PAK4-210ENST00000599657 CHIC1Q5VXU3 224 aa32.38■■■□□ 2.77
PAK4-210ENST00000599657 SHROOM2Q13796 1616 aa32.33■■■□□ 2.77
PAK4-210ENST00000599657 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
PAK4-210ENST00000599657 KIAA0586Q9BVV6 1533 aa32.26■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms