RNA–Protein interactions for RNA: ENST00000599504.5

ZNF546-206, Transcript of zinc finger protein 546, humanhuman

TSL 4

Gene ZNF546, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-206ENST00000599504 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
ZNF546-206ENST00000599504 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
ZNF546-206ENST00000599504 ABCC9O60706 1549 aa26.33■■□□□ 1.81
ZNF546-206ENST00000599504 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
ZNF546-206ENST00000599504 NACADO15069 1562 aa24.98■■□□□ 1.59
ZNF546-206ENST00000599504 UNC13AQ9UPW8 1703 aa24.73■■□□□ 1.55
ZNF546-206ENST00000599504 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
ZNF546-206ENST00000599504 MYO15BQ96JP2 1530 aa24.68■■□□□ 1.54
ZNF546-206ENST00000599504 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
ZNF546-206ENST00000599504 BICRAQ9NZM4 1560 aa24.47■■□□□ 1.51
ZNF546-206ENST00000599504 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
ZNF546-206ENST00000599504 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.5
ZNF546-206ENST00000599504 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
ZNF546-206ENST00000599504 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
ZNF546-206ENST00000599504 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
ZNF546-206ENST00000599504 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
ZNF546-206ENST00000599504 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
ZNF546-206ENST00000599504 CECR2Q9BXF3 1484 aa23.73■■□□□ 1.39
ZNF546-206ENST00000599504 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
ZNF546-206ENST00000599504 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
ZNF546-206ENST00000599504 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
ZNF546-206ENST00000599504 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
ZNF546-206ENST00000599504 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
ZNF546-206ENST00000599504 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
ZNF546-206ENST00000599504 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
ZNF546-206ENST00000599504 CUX2O14529 1486 aa22.76■■□□□ 1.23
ZNF546-206ENST00000599504 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
ZNF546-206ENST00000599504 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
ZNF546-206ENST00000599504 DNAJC5Q9H3Z4 198 aa22.69■■□□□ 1.22
ZNF546-206ENST00000599504 NESP48681 1621 aa22.65■■□□□ 1.22
ZNF546-206ENST00000599504 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
ZNF546-206ENST00000599504 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
ZNF546-206ENST00000599504 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
ZNF546-206ENST00000599504 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
ZNF546-206ENST00000599504 WIZO95785 1651 aa22.41■■□□□ 1.18
ZNF546-206ENST00000599504 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
ZNF546-206ENST00000599504 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
ZNF546-206ENST00000599504 WDR62O43379 1518 aa22.17■■□□□ 1.14
ZNF546-206ENST00000599504 MRC2Q9UBG0 1479 aa22.17■■□□□ 1.14
ZNF546-206ENST00000599504 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
ZNF546-206ENST00000599504 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
ZNF546-206ENST00000599504 CFTRP13569 1480 aa22.09■■□□□ 1.13
ZNF546-206ENST00000599504 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
ZNF546-206ENST00000599504 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
ZNF546-206ENST00000599504 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
ZNF546-206ENST00000599504 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
ZNF546-206ENST00000599504 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
ZNF546-206ENST00000599504 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
ZNF546-206ENST00000599504 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
ZNF546-206ENST00000599504 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
ZNF546-206ENST00000599504 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
ZNF546-206ENST00000599504 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
ZNF546-206ENST00000599504 DNMBPQ6XZF7 1577 aa21.6■■□□□ 1.05
ZNF546-206ENST00000599504 TRIM41Q8WV44 630 aa21.57■■□□□ 1.04
ZNF546-206ENST00000599504 EIF4G3O43432 1585 aaKnown RBP21.54■■□□□ 1.04
ZNF546-206ENST00000599504 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
ZNF546-206ENST00000599504 RIMBP3CA6NJZ7 1639 aa21.46■■□□□ 1.03
ZNF546-206ENST00000599504 RIMBP3BA6NNM3 1639 aa21.46■■□□□ 1.03
ZNF546-206ENST00000599504 RIMBP3Q9UFD9 1639 aa21.46■■□□□ 1.03
ZNF546-206ENST00000599504 POLA1P09884 1462 aaPredicted RBP21.43■■□□□ 1.02
ZNF546-206ENST00000599504 CHD1O14646 1710 aa21.43■■□□□ 1.02
ZNF546-206ENST00000599504 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.01
ZNF546-206ENST00000599504 ARHGEF11O15085 1522 aa21.36■■□□□ 1.01
ZNF546-206ENST00000599504 WDR97A6NE52 1622 aa21.32■■□□□ 1
ZNF546-206ENST00000599504 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
ZNF546-206ENST00000599504 CUX1P39880 1505 aa21.29■■□□□ 1
ZNF546-206ENST00000599504 SOGA1O94964 1423 aa21.28■■□□□ 1
ZNF546-206ENST00000599504 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
ZNF546-206ENST00000599504 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
ZNF546-206ENST00000599504 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
ZNF546-206ENST00000599504 CLASP1Q7Z460 1538 aa21.15■□□□□ 0.98
ZNF546-206ENST00000599504 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
ZNF546-206ENST00000599504 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
ZNF546-206ENST00000599504 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
ZNF546-206ENST00000599504 GRIN2BQ13224 1484 aa21.12■□□□□ 0.97
ZNF546-206ENST00000599504 FBLN2P98095 1184 aa21.11■□□□□ 0.97
ZNF546-206ENST00000599504 ABCA5Q8WWZ7 1642 aa21.09■□□□□ 0.97
ZNF546-206ENST00000599504 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
ZNF546-206ENST00000599504 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
ZNF546-206ENST00000599504 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
ZNF546-206ENST00000599504 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
ZNF546-206ENST00000599504 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
ZNF546-206ENST00000599504 BIVM-ERCC5R4GMW8 1640 aa21.01■□□□□ 0.95
ZNF546-206ENST00000599504 CHMP7Q8WUX9 453 aaPredicted RBP21■□□□□ 0.95
ZNF546-206ENST00000599504 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
ZNF546-206ENST00000599504 TOP2BQ02880 1626 aa20.97■□□□□ 0.95
ZNF546-206ENST00000599504 WRNQ14191 1432 aaPredicted RBP eCLIP20.91■□□□□ 0.94
ZNF546-206ENST00000599504 ADAMTS12P58397 1594 aa20.9■□□□□ 0.94
ZNF546-206ENST00000599504 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
ZNF546-206ENST00000599504 CEP170Q5SW79 1584 aa20.83■□□□□ 0.92
ZNF546-206ENST00000599504 NUP160Q12769 1436 aa20.82■□□□□ 0.92
ZNF546-206ENST00000599504 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
ZNF546-206ENST00000599504 SHROOM2Q13796 1616 aa20.81■□□□□ 0.92
ZNF546-206ENST00000599504 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
ZNF546-206ENST00000599504 ERCC6L2Q5T890 1561 aa20.79■□□□□ 0.92
ZNF546-206ENST00000599504 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
ZNF546-206ENST00000599504 RUSC2Q8N2Y8 1516 aa20.62■□□□□ 0.89
ZNF546-206ENST00000599504 KIF13AQ9H1H9 1805 aa20.56■□□□□ 0.88
ZNF546-206ENST00000599504 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
ZNF546-206ENST00000599504 CUL7Q14999 1698 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms