RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 NISCHQ9Y2I1 1504 aa29.68■■■□□ 2.34
TMEM38A-203ENST00000599479 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
TMEM38A-203ENST00000599479 ABCC9O60706 1549 aa25.75■■□□□ 1.71
TMEM38A-203ENST00000599479 NACADO15069 1562 aa24.8■■□□□ 1.56
TMEM38A-203ENST00000599479 RB1CC1Q8TDY2 1594 aa24.77■■□□□ 1.56
TMEM38A-203ENST00000599479 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
TMEM38A-203ENST00000599479 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
TMEM38A-203ENST00000599479 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.55
TMEM38A-203ENST00000599479 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
TMEM38A-203ENST00000599479 PABPN1Q86U42 306 aaKnown RBP eCLIP24.12■■□□□ 1.45
TMEM38A-203ENST00000599479 UNC13AQ9UPW8 1703 aa24.12■■□□□ 1.45
TMEM38A-203ENST00000599479 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.44
TMEM38A-203ENST00000599479 SCRIBQ14160 1630 aa23.94■■□□□ 1.42
TMEM38A-203ENST00000599479 SHROOM4Q9ULL8 1493 aa23.85■■□□□ 1.41
TMEM38A-203ENST00000599479 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
TMEM38A-203ENST00000599479 EIF4G1Q04637 1599 aaKnown RBP23.41■■□□□ 1.34
TMEM38A-203ENST00000599479 CC2D2AQ9P2K1 1620 aa23.29■■□□□ 1.32
TMEM38A-203ENST00000599479 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
TMEM38A-203ENST00000599479 NCAPD3P42695 1498 aa22.96■■□□□ 1.27
TMEM38A-203ENST00000599479 BAZ1AQ9NRL2 1556 aaPredicted RBP22.96■■□□□ 1.27
TMEM38A-203ENST00000599479 SMARCA4P51532 1647 aa22.96■■□□□ 1.27
TMEM38A-203ENST00000599479 ATAD2BQ9ULI0 1458 aa22.92■■□□□ 1.26
TMEM38A-203ENST00000599479 MROH2BQ7Z745 1585 aa22.85■■□□□ 1.25
TMEM38A-203ENST00000599479 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
TMEM38A-203ENST00000599479 PEG3Q9GZU2 1588 aa22.82■■□□□ 1.24
TMEM38A-203ENST00000599479 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
TMEM38A-203ENST00000599479 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
TMEM38A-203ENST00000599479 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
TMEM38A-203ENST00000599479 WIZO95785 1651 aa22.53■■□□□ 1.2
TMEM38A-203ENST00000599479 TOP2AP11388 1531 aaKnown RBP22.33■■□□□ 1.17
TMEM38A-203ENST00000599479 NESP48681 1621 aa22.3■■□□□ 1.16
TMEM38A-203ENST00000599479 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
TMEM38A-203ENST00000599479 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
TMEM38A-203ENST00000599479 ERCC6Q03468 1493 aa22.16■■□□□ 1.14
TMEM38A-203ENST00000599479 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.13
TMEM38A-203ENST00000599479 CFTRP13569 1480 aa22.13■■□□□ 1.13
TMEM38A-203ENST00000599479 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
TMEM38A-203ENST00000599479 CUX2O14529 1486 aa22.01■■□□□ 1.11
TMEM38A-203ENST00000599479 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
TMEM38A-203ENST00000599479 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
TMEM38A-203ENST00000599479 KIF21AQ7Z4S6 1674 aa21.94■■□□□ 1.1
TMEM38A-203ENST00000599479 THOC2Q8NI27 1593 aaKnown RBP21.92■■□□□ 1.1
TMEM38A-203ENST00000599479 CEP164Q9UPV0 1460 aa21.89■■□□□ 1.09
TMEM38A-203ENST00000599479 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
TMEM38A-203ENST00000599479 WDR62O43379 1518 aa21.8■■□□□ 1.08
TMEM38A-203ENST00000599479 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
TMEM38A-203ENST00000599479 URB2Q14146 1524 aaKnown RBP21.74■■□□□ 1.07
TMEM38A-203ENST00000599479 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
TMEM38A-203ENST00000599479 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
TMEM38A-203ENST00000599479 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
TMEM38A-203ENST00000599479 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
TMEM38A-203ENST00000599479 DNAJC5Q9H3Z4 198 aa21.43■■□□□ 1.02
TMEM38A-203ENST00000599479 CUX1P39880 1505 aa21.43■■□□□ 1.02
TMEM38A-203ENST00000599479 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
TMEM38A-203ENST00000599479 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
TMEM38A-203ENST00000599479 TARBP1Q13395 1621 aaKnown RBP21.35■■□□□ 1.01
TMEM38A-203ENST00000599479 SOGA1O94964 1423 aa21.35■■□□□ 1.01
TMEM38A-203ENST00000599479 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
TMEM38A-203ENST00000599479 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
TMEM38A-203ENST00000599479 WRNQ14191 1432 aaPredicted RBP eCLIP21.3■■□□□ 1
TMEM38A-203ENST00000599479 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.99
TMEM38A-203ENST00000599479 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
TMEM38A-203ENST00000599479 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
TMEM38A-203ENST00000599479 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
TMEM38A-203ENST00000599479 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
TMEM38A-203ENST00000599479 BIVM-ERCC5R4GMW8 1640 aa21.19■□□□□ 0.98
TMEM38A-203ENST00000599479 ABCA10Q8WWZ4 1543 aa21.18■□□□□ 0.98
TMEM38A-203ENST00000599479 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
TMEM38A-203ENST00000599479 OSCARQ8IYS5 282 aa21.15■□□□□ 0.98
TMEM38A-203ENST00000599479 GRIN2BQ13224 1484 aa21.08■□□□□ 0.97
TMEM38A-203ENST00000599479 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
TMEM38A-203ENST00000599479 MAGI1Q96QZ7 1491 aaPredicted RBP21.03■□□□□ 0.96
TMEM38A-203ENST00000599479 ABCA5Q8WWZ7 1642 aa21.03■□□□□ 0.96
TMEM38A-203ENST00000599479 SNAPC4Q5SXM2 1469 aa21.01■□□□□ 0.95
TMEM38A-203ENST00000599479 FBLN2P98095 1184 aa20.95■□□□□ 0.94
TMEM38A-203ENST00000599479 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
TMEM38A-203ENST00000599479 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
TMEM38A-203ENST00000599479 ERICH3Q5RHP9 1530 aa20.9■□□□□ 0.94
TMEM38A-203ENST00000599479 PBRM1Q86U86 1689 aa20.89■□□□□ 0.94
TMEM38A-203ENST00000599479 CHD1O14646 1710 aa20.87■□□□□ 0.93
TMEM38A-203ENST00000599479 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
TMEM38A-203ENST00000599479 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
TMEM38A-203ENST00000599479 IGF1RP08069 1367 aa20.86■□□□□ 0.93
TMEM38A-203ENST00000599479 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
TMEM38A-203ENST00000599479 TRIM41Q8WV44 630 aa20.8■□□□□ 0.92
TMEM38A-203ENST00000599479 GRIN2AQ12879 1464 aa20.8■□□□□ 0.92
TMEM38A-203ENST00000599479 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
TMEM38A-203ENST00000599479 NUP160Q12769 1436 aa20.76■□□□□ 0.91
TMEM38A-203ENST00000599479 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
TMEM38A-203ENST00000599479 RIMBP3CA6NJZ7 1639 aa20.68■□□□□ 0.9
TMEM38A-203ENST00000599479 RIMBP3BA6NNM3 1639 aa20.68■□□□□ 0.9
TMEM38A-203ENST00000599479 RIMBP3Q9UFD9 1639 aa20.68■□□□□ 0.9
TMEM38A-203ENST00000599479 CARMIL1Q5VZK9 1371 aa20.68■□□□□ 0.9
TMEM38A-203ENST00000599479 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
TMEM38A-203ENST00000599479 CEP170Q5SW79 1584 aa20.67■□□□□ 0.9
TMEM38A-203ENST00000599479 CUL7Q14999 1698 aa20.64■□□□□ 0.89
TMEM38A-203ENST00000599479 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
TMEM38A-203ENST00000599479 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.89
TMEM38A-203ENST00000599479 JPH4Q96JJ6 628 aa20.58■□□□□ 0.89
TMEM38A-203ENST00000599479 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms