RNA–Protein interactions for RNA: ENST00000599464.1

PRKD2-213, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-213ENST00000599464 NISCHQ9Y2I1 1504 aa23.08■■□□□ 1.28
PRKD2-213ENST00000599464 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
PRKD2-213ENST00000599464 ABCC9O60706 1549 aa20.51■□□□□ 0.87
PRKD2-213ENST00000599464 RB1CC1Q8TDY2 1594 aa19.6■□□□□ 0.73
PRKD2-213ENST00000599464 DCAF8L2P0C7V8 631 aa19.53■□□□□ 0.72
PRKD2-213ENST00000599464 NACADO15069 1562 aa19.48■□□□□ 0.71
PRKD2-213ENST00000599464 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
PRKD2-213ENST00000599464 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
PRKD2-213ENST00000599464 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
PRKD2-213ENST00000599464 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
PRKD2-213ENST00000599464 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
PRKD2-213ENST00000599464 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
PRKD2-213ENST00000599464 BICRAQ9NZM4 1560 aa18.92■□□□□ 0.62
PRKD2-213ENST00000599464 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
PRKD2-213ENST00000599464 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.59
PRKD2-213ENST00000599464 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
PRKD2-213ENST00000599464 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
PRKD2-213ENST00000599464 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
PRKD2-213ENST00000599464 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
PRKD2-213ENST00000599464 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
PRKD2-213ENST00000599464 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
PRKD2-213ENST00000599464 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
PRKD2-213ENST00000599464 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
PRKD2-213ENST00000599464 HMGXB3Q12766 1538 aa17.86■□□□□ 0.45
PRKD2-213ENST00000599464 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
PRKD2-213ENST00000599464 MROH2BQ7Z745 1585 aa17.78■□□□□ 0.44
PRKD2-213ENST00000599464 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
PRKD2-213ENST00000599464 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
PRKD2-213ENST00000599464 NESP48681 1621 aa17.62■□□□□ 0.41
PRKD2-213ENST00000599464 CUX2O14529 1486 aa17.6■□□□□ 0.41
PRKD2-213ENST00000599464 WIZO95785 1651 aa17.57■□□□□ 0.4
PRKD2-213ENST00000599464 LAMC3Q9Y6N6 1575 aa17.56■□□□□ 0.4
PRKD2-213ENST00000599464 PDS5BQ9NTI5 1447 aa17.49■□□□□ 0.39
PRKD2-213ENST00000599464 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
PRKD2-213ENST00000599464 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
PRKD2-213ENST00000599464 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
PRKD2-213ENST00000599464 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
PRKD2-213ENST00000599464 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
PRKD2-213ENST00000599464 DNAJC5Q9H3Z4 198 aa17.34■□□□□ 0.37
PRKD2-213ENST00000599464 MRC2Q9UBG0 1479 aa17.31■□□□□ 0.36
PRKD2-213ENST00000599464 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
PRKD2-213ENST00000599464 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.36
PRKD2-213ENST00000599464 CFTRP13569 1480 aa17.26■□□□□ 0.35
PRKD2-213ENST00000599464 WDR62O43379 1518 aa17.22■□□□□ 0.35
PRKD2-213ENST00000599464 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
PRKD2-213ENST00000599464 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
PRKD2-213ENST00000599464 URB2Q14146 1524 aaKnown RBP17.07■□□□□ 0.32
PRKD2-213ENST00000599464 ABCC8Q09428 1581 aa16.95■□□□□ 0.3
PRKD2-213ENST00000599464 SUPT5HO00267 1087 aaKnown RBP16.94■□□□□ 0.3
PRKD2-213ENST00000599464 TOPBP1Q92547 1522 aa16.94■□□□□ 0.3
PRKD2-213ENST00000599464 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
PRKD2-213ENST00000599464 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
PRKD2-213ENST00000599464 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
PRKD2-213ENST00000599464 ZNF608Q9ULD9 1512 aaPredicted RBP16.84■□□□□ 0.29
PRKD2-213ENST00000599464 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
PRKD2-213ENST00000599464 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
PRKD2-213ENST00000599464 TRIM41Q8WV44 630 aa16.77■□□□□ 0.28
PRKD2-213ENST00000599464 SOGA1O94964 1423 aa16.74■□□□□ 0.27
PRKD2-213ENST00000599464 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
PRKD2-213ENST00000599464 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.27
PRKD2-213ENST00000599464 FGD5Q6ZNL6 1462 aa16.72■□□□□ 0.27
PRKD2-213ENST00000599464 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
PRKD2-213ENST00000599464 CUX1P39880 1505 aa16.7■□□□□ 0.26
PRKD2-213ENST00000599464 FBLN2P98095 1184 aa16.68■□□□□ 0.26
PRKD2-213ENST00000599464 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
PRKD2-213ENST00000599464 WDR97A6NE52 1622 aa16.63■□□□□ 0.25
PRKD2-213ENST00000599464 SNAPC4Q5SXM2 1469 aa16.59■□□□□ 0.25
PRKD2-213ENST00000599464 CHD1O14646 1710 aa16.59■□□□□ 0.25
PRKD2-213ENST00000599464 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
PRKD2-213ENST00000599464 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
PRKD2-213ENST00000599464 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
PRKD2-213ENST00000599464 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
PRKD2-213ENST00000599464 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
PRKD2-213ENST00000599464 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
PRKD2-213ENST00000599464 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
PRKD2-213ENST00000599464 ARHGEF11O15085 1522 aa16.54■□□□□ 0.24
PRKD2-213ENST00000599464 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
PRKD2-213ENST00000599464 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
PRKD2-213ENST00000599464 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
PRKD2-213ENST00000599464 TOP2BQ02880 1626 aa16.48■□□□□ 0.23
PRKD2-213ENST00000599464 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
PRKD2-213ENST00000599464 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
PRKD2-213ENST00000599464 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
PRKD2-213ENST00000599464 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
PRKD2-213ENST00000599464 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
PRKD2-213ENST00000599464 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
PRKD2-213ENST00000599464 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
PRKD2-213ENST00000599464 GRIN2AQ12879 1464 aa16.35■□□□□ 0.21
PRKD2-213ENST00000599464 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
PRKD2-213ENST00000599464 FHAD1B1AJZ9 1412 aa16.34■□□□□ 0.21
PRKD2-213ENST00000599464 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
PRKD2-213ENST00000599464 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
PRKD2-213ENST00000599464 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
PRKD2-213ENST00000599464 NUP160Q12769 1436 aa16.25■□□□□ 0.19
PRKD2-213ENST00000599464 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
PRKD2-213ENST00000599464 ERCC6L2Q5T890 1561 aa16.15■□□□□ 0.18
PRKD2-213ENST00000599464 CUL7Q14999 1698 aa16.14■□□□□ 0.18
PRKD2-213ENST00000599464 IGF1RP08069 1367 aa16.13■□□□□ 0.17
PRKD2-213ENST00000599464 PRG4Q92954 1404 aaPredicted RBP16.13■□□□□ 0.17
PRKD2-213ENST00000599464 SHROOM2Q13796 1616 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms