RNA–Protein interactions for RNA: ENST00000599459.1

TRPM4-212, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-212ENST00000599459 NISCHQ9Y2I1 1504 aa47.61■■■■■ 5.21
TRPM4-212ENST00000599459 CCDC180Q9P1Z9 1646 aa42.54■■■■■ 4.4
TRPM4-212ENST00000599459 ABCC9O60706 1549 aa42.2■■■■■ 4.35
TRPM4-212ENST00000599459 RB1CC1Q8TDY2 1594 aa40.31■■■■■ 4.04
TRPM4-212ENST00000599459 NACADO15069 1562 aa40.12■■■■■ 4.01
TRPM4-212ENST00000599459 DCAF8L2P0C7V8 631 aa40■■■■□ 3.99
TRPM4-212ENST00000599459 MYO15BQ96JP2 1530 aa39.68■■■■□ 3.94
TRPM4-212ENST00000599459 ZCCHC6Q5VYS8 1495 aaKnown RBP39.56■■■■□ 3.92
TRPM4-212ENST00000599459 UNC13AQ9UPW8 1703 aa39.43■■■■□ 3.9
TRPM4-212ENST00000599459 PABPN1Q86U42 306 aaKnown RBP eCLIP39.33■■■■□ 3.89
TRPM4-212ENST00000599459 DCAF1Q9Y4B6 1507 aa39.33■■■■□ 3.89
TRPM4-212ENST00000599459 DNAJC5BQ9UF47 199 aa39.21■■■■□ 3.87
TRPM4-212ENST00000599459 BICRAQ9NZM4 1560 aa39.14■■■■□ 3.86
TRPM4-212ENST00000599459 SCRIBQ14160 1630 aa38.84■■■■□ 3.81
TRPM4-212ENST00000599459 SHROOM4Q9ULL8 1493 aa38.61■■■■□ 3.77
TRPM4-212ENST00000599459 EIF4G1Q04637 1599 aaKnown RBP38.14■■■■□ 3.7
TRPM4-212ENST00000599459 CC2D2AQ9P2K1 1620 aa38.13■■■■□ 3.69
TRPM4-212ENST00000599459 CECR2Q9BXF3 1484 aa37.96■■■■□ 3.67
TRPM4-212ENST00000599459 SMARCA4P51532 1647 aa37.07■■■■□ 3.52
TRPM4-212ENST00000599459 NCAPD3P42695 1498 aa37.02■■■■□ 3.52
TRPM4-212ENST00000599459 ATAD2BQ9ULI0 1458 aa37■■■■□ 3.51
TRPM4-212ENST00000599459 BAZ1AQ9NRL2 1556 aaPredicted RBP36.92■■■■□ 3.5
TRPM4-212ENST00000599459 SMARCA2P51531 1590 aa36.9■■■■□ 3.5
TRPM4-212ENST00000599459 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
TRPM4-212ENST00000599459 MROH2BQ7Z745 1585 aa36.7■■■■□ 3.47
TRPM4-212ENST00000599459 PEG3Q9GZU2 1588 aa36.69■■■■□ 3.46
TRPM4-212ENST00000599459 BAZ1BQ9UIG0 1483 aaKnown RBP36.66■■■■□ 3.46
TRPM4-212ENST00000599459 ERCC6Q03468 1493 aa36.39■■■■□ 3.42
TRPM4-212ENST00000599459 NESP48681 1621 aa36.37■■■■□ 3.41
TRPM4-212ENST00000599459 WIZO95785 1651 aa36.29■■■■□ 3.4
TRPM4-212ENST00000599459 CUX2O14529 1486 aa36.17■■■■□ 3.38
TRPM4-212ENST00000599459 LAMC3Q9Y6N6 1575 aa36.14■■■■□ 3.38
TRPM4-212ENST00000599459 RSF1Q96T23 1441 aaPredicted RBP36.08■■■■□ 3.37
TRPM4-212ENST00000599459 CADPSQ9ULU8 1353 aa35.92■■■■□ 3.34
TRPM4-212ENST00000599459 THOC2Q8NI27 1593 aaKnown RBP35.92■■■■□ 3.34
TRPM4-212ENST00000599459 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
TRPM4-212ENST00000599459 PDS5BQ9NTI5 1447 aa35.91■■■■□ 3.34
TRPM4-212ENST00000599459 TOP2AP11388 1531 aaKnown RBP35.85■■■■□ 3.33
TRPM4-212ENST00000599459 DNAJC5Q9H3Z4 198 aa35.69■■■■□ 3.3
TRPM4-212ENST00000599459 CFTRP13569 1480 aa35.6■■■■□ 3.29
TRPM4-212ENST00000599459 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
TRPM4-212ENST00000599459 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
TRPM4-212ENST00000599459 CEP164Q9UPV0 1460 aa35.54■■■■□ 3.28
TRPM4-212ENST00000599459 WDR62O43379 1518 aa35.51■■■■□ 3.27
TRPM4-212ENST00000599459 CCDC88BA6NC98 1476 aa35.43■■■■□ 3.26
TRPM4-212ENST00000599459 PRDM2Q13029 1718 aa35.3■■■■□ 3.24
TRPM4-212ENST00000599459 URB2Q14146 1524 aaKnown RBP35.23■■■■□ 3.23
TRPM4-212ENST00000599459 TOPBP1Q92547 1522 aa34.91■■■■□ 3.18
TRPM4-212ENST00000599459 ABCC8Q09428 1581 aa34.82■■■■□ 3.16
TRPM4-212ENST00000599459 DNMBPQ6XZF7 1577 aa34.82■■■■□ 3.16
TRPM4-212ENST00000599459 IFT140Q96RY7 1462 aa34.8■■■■□ 3.16
TRPM4-212ENST00000599459 SUPT5HO00267 1087 aaKnown RBP34.77■■■■□ 3.16
TRPM4-212ENST00000599459 ZNF608Q9ULD9 1512 aaPredicted RBP34.74■■■■□ 3.15
TRPM4-212ENST00000599459 POLA1P09884 1462 aaPredicted RBP34.58■■■■□ 3.13
TRPM4-212ENST00000599459 TARBP1Q13395 1621 aaKnown RBP34.58■■■■□ 3.13
TRPM4-212ENST00000599459 EIF4G3O43432 1585 aaKnown RBP34.57■■■■□ 3.13
TRPM4-212ENST00000599459 OSCARQ8IYS5 282 aa34.56■■■■□ 3.12
TRPM4-212ENST00000599459 CUX1P39880 1505 aa34.47■■■■□ 3.11
TRPM4-212ENST00000599459 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.118e-7■■■■■ 28.7
TRPM4-212ENST00000599459 RAD54L2Q9Y4B4 1467 aa34.46■■■■□ 3.11
TRPM4-212ENST00000599459 FGD5Q6ZNL6 1462 aa34.43■■■■□ 3.1
TRPM4-212ENST00000599459 SOGA1O94964 1423 aa34.41■■■■□ 3.1
TRPM4-212ENST00000599459 TRIM41Q8WV44 630 aa34.33■■■■□ 3.09
TRPM4-212ENST00000599459 TDRD9Q8NDG6 1382 aaKnown RBP34.31■■■■□ 3.08
TRPM4-212ENST00000599459 CHD1O14646 1710 aa34.24■■■■□ 3.07
TRPM4-212ENST00000599459 WDR97A6NE52 1622 aa34.22■■■■□ 3.07
TRPM4-212ENST00000599459 FBLN2P98095 1184 aa34.14■■■■□ 3.06
TRPM4-212ENST00000599459 SNAPC4Q5SXM2 1469 aa34.14■■■■□ 3.06
TRPM4-212ENST00000599459 RIMBP3CA6NJZ7 1639 aa34.12■■■■□ 3.05
TRPM4-212ENST00000599459 RIMBP3BA6NNM3 1639 aa34.12■■■■□ 3.05
TRPM4-212ENST00000599459 RIMBP3Q9UFD9 1639 aa34.12■■■■□ 3.05
TRPM4-212ENST00000599459 GRIN2BQ13224 1484 aa34.07■■■■□ 3.05
TRPM4-212ENST00000599459 ARHGEF11O15085 1522 aa34.05■■■■□ 3.04
TRPM4-212ENST00000599459 ABCA10Q8WWZ4 1543 aa34.04■■■■□ 3.04
TRPM4-212ENST00000599459 MAGI1Q96QZ7 1491 aaPredicted RBP34.03■■■■□ 3.04
TRPM4-212ENST00000599459 WRNQ14191 1432 aaPredicted RBP eCLIP34.02■■■■□ 3.04
TRPM4-212ENST00000599459 GAPVD1Q14C86 1478 aa34.01■■■■□ 3.04
TRPM4-212ENST00000599459 TOP2BQ02880 1626 aa34.01■■■■□ 3.03
TRPM4-212ENST00000599459 BIVM-ERCC5R4GMW8 1640 aa34.01■■■■□ 3.03
TRPM4-212ENST00000599459 SYNJ1O43426 1573 aa34■■■■□ 3.03
TRPM4-212ENST00000599459 PBRM1Q86U86 1689 aa33.99■■■■□ 3.03
TRPM4-212ENST00000599459 ABCA5Q8WWZ7 1642 aa33.97■■■■□ 3.03
TRPM4-212ENST00000599459 CHMP7Q8WUX9 453 aaPredicted RBP33.94■■■■□ 3.02
TRPM4-212ENST00000599459 SYNJ2O15056 1496 aa33.92■■■■□ 3.02
TRPM4-212ENST00000599459 CLASP1Q7Z460 1538 aa33.84■■■■□ 3.01
TRPM4-212ENST00000599459 ARAP1Q96P48 1450 aa33.76■■■□□ 2.99
TRPM4-212ENST00000599459 CYB5RLQ6IPT4 315 aa33.75■■■□□ 2.99
TRPM4-212ENST00000599459 ADAMTS12P58397 1594 aa33.7■■■□□ 2.99
TRPM4-212ENST00000599459 GRIN2AQ12879 1464 aa33.65■■■□□ 2.98
TRPM4-212ENST00000599459 ERICH3Q5RHP9 1530 aa33.63■■■□□ 2.97
TRPM4-212ENST00000599459 FHAD1B1AJZ9 1412 aa33.59■■■□□ 2.97
TRPM4-212ENST00000599459 CEP170Q5SW79 1584 aa33.52■■■□□ 2.96
TRPM4-212ENST00000599459 NUP160Q12769 1436 aa33.52■■■□□ 2.96
TRPM4-212ENST00000599459 ERCC6L2Q5T890 1561 aa33.37■■■□□ 2.93
TRPM4-212ENST00000599459 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
TRPM4-212ENST00000599459 SHROOM2Q13796 1616 aa33.33■■■□□ 2.93
TRPM4-212ENST00000599459 IGF1RP08069 1367 aa33.28■■■□□ 2.92
TRPM4-212ENST00000599459 TRHP20396 242 aaPredicted RBP33.25■■■□□ 2.91
TRPM4-212ENST00000599459 CUL7Q14999 1698 aa33.22■■■□□ 2.91
TRPM4-212ENST00000599459 RUSC2Q8N2Y8 1516 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms