RNA–Protein interactions for RNA: ENST00000599429.5

GTPBP3-220, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-220ENST00000599429 NISCHQ9Y2I1 1504 aa43.27■■■■■ 4.52
GTPBP3-220ENST00000599429 CCDC180Q9P1Z9 1646 aa38.46■■■■□ 3.75
GTPBP3-220ENST00000599429 ABCC9O60706 1549 aa37.76■■■■□ 3.63
GTPBP3-220ENST00000599429 RB1CC1Q8TDY2 1594 aa36.26■■■■□ 3.39
GTPBP3-220ENST00000599429 DCAF8L2P0C7V8 631 aa36.24■■■■□ 3.39
GTPBP3-220ENST00000599429 NACADO15069 1562 aa36.21■■■■□ 3.39
GTPBP3-220ENST00000599429 ZCCHC6Q5VYS8 1495 aaKnown RBP36■■■■□ 3.35
GTPBP3-220ENST00000599429 MYO15BQ96JP2 1530 aa35.97■■■■□ 3.35
GTPBP3-220ENST00000599429 DCAF1Q9Y4B6 1507 aa35.78■■■■□ 3.32
GTPBP3-220ENST00000599429 UNC13AQ9UPW8 1703 aa35.45■■■■□ 3.27
GTPBP3-220ENST00000599429 PABPN1Q86U42 306 aaKnown RBP eCLIP35.31■■■■□ 3.24
GTPBP3-220ENST00000599429 BICRAQ9NZM4 1560 aa35.19■■■■□ 3.22
GTPBP3-220ENST00000599429 SCRIBQ14160 1630 aa35.1■■■■□ 3.21
GTPBP3-220ENST00000599429 DNAJC5BQ9UF47 199 aa34.81■■■■□ 3.16
GTPBP3-220ENST00000599429 SHROOM4Q9ULL8 1493 aa34.77■■■■□ 3.16
GTPBP3-220ENST00000599429 EIF4G1Q04637 1599 aaKnown RBP34.25■■■■□ 3.07
GTPBP3-220ENST00000599429 CC2D2AQ9P2K1 1620 aa34.15■■■■□ 3.06
GTPBP3-220ENST00000599429 CECR2Q9BXF3 1484 aa33.94■■■■□ 3.02
GTPBP3-220ENST00000599429 SMARCA4P51532 1647 aa33.57■■■□□ 2.97
GTPBP3-220ENST00000599429 BAZ1AQ9NRL2 1556 aaPredicted RBP33.52■■■□□ 2.96
GTPBP3-220ENST00000599429 NCAPD3P42695 1498 aa33.44■■■□□ 2.94
GTPBP3-220ENST00000599429 ATAD2BQ9ULI0 1458 aa33.44■■■□□ 2.94
GTPBP3-220ENST00000599429 SMARCA2P51531 1590 aa33.37■■■□□ 2.93
GTPBP3-220ENST00000599429 MROH2BQ7Z745 1585 aa33.35■■■□□ 2.93
GTPBP3-220ENST00000599429 PEG3Q9GZU2 1588 aa33.26■■■□□ 2.91
GTPBP3-220ENST00000599429 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
GTPBP3-220ENST00000599429 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
GTPBP3-220ENST00000599429 WIZO95785 1651 aa32.98■■■□□ 2.87
GTPBP3-220ENST00000599429 RSF1Q96T23 1441 aaPredicted RBP32.95■■■□□ 2.87
GTPBP3-220ENST00000599429 NESP48681 1621 aa32.66■■■□□ 2.82
GTPBP3-220ENST00000599429 TOP2AP11388 1531 aaKnown RBP32.61■■■□□ 2.81
GTPBP3-220ENST00000599429 LAMC3Q9Y6N6 1575 aa32.53■■■□□ 2.8
GTPBP3-220ENST00000599429 ERCC6Q03468 1493 aa32.53■■■□□ 2.8
GTPBP3-220ENST00000599429 CADPSQ9ULU8 1353 aa32.46■■■□□ 2.79
GTPBP3-220ENST00000599429 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
GTPBP3-220ENST00000599429 CCDC88BA6NC98 1476 aa32.27■■■□□ 2.76
GTPBP3-220ENST00000599429 CFTRP13569 1480 aa32.24■■■□□ 2.75
GTPBP3-220ENST00000599429 KIF21AQ7Z4S6 1674 aa32.24■■■□□ 2.75
GTPBP3-220ENST00000599429 CUX2O14529 1486 aa32.22■■■□□ 2.75
GTPBP3-220ENST00000599429 THOC2Q8NI27 1593 aaKnown RBP32.14■■■□□ 2.74
GTPBP3-220ENST00000599429 SUPT5HO00267 1087 aaKnown RBP32.09■■■□□ 2.73
GTPBP3-220ENST00000599429 FANCD2Q9BXW9 1451 aa32.07■■■□□ 2.72
GTPBP3-220ENST00000599429 CEP164Q9UPV0 1460 aa32.02■■■□□ 2.72
GTPBP3-220ENST00000599429 MRC2Q9UBG0 1479 aa32■■■□□ 2.71
GTPBP3-220ENST00000599429 PRDM2Q13029 1718 aa31.95■■■□□ 2.7
GTPBP3-220ENST00000599429 WDR62O43379 1518 aa31.89■■■□□ 2.7
GTPBP3-220ENST00000599429 URB2Q14146 1524 aaKnown RBP31.76■■■□□ 2.68
GTPBP3-220ENST00000599429 TOPBP1Q92547 1522 aa31.55■■■□□ 2.64
GTPBP3-220ENST00000599429 ABCC8Q09428 1581 aa31.54■■■□□ 2.64
GTPBP3-220ENST00000599429 DNMBPQ6XZF7 1577 aa31.49■■■□□ 2.63
GTPBP3-220ENST00000599429 DNAJC5Q9H3Z4 198 aa31.39■■■□□ 2.62
GTPBP3-220ENST00000599429 IFT140Q96RY7 1462 aa31.37■■■□□ 2.61
GTPBP3-220ENST00000599429 CUX1P39880 1505 aa31.29■■■□□ 2.6
GTPBP3-220ENST00000599429 POLA1P09884 1462 aaPredicted RBP31.27■■■□□ 2.6
GTPBP3-220ENST00000599429 ZNF608Q9ULD9 1512 aaPredicted RBP31.25■■■□□ 2.59
GTPBP3-220ENST00000599429 TARBP1Q13395 1621 aaKnown RBP31.21■■■□□ 2.59
GTPBP3-220ENST00000599429 FGD5Q6ZNL6 1462 aa31.19■■■□□ 2.58
GTPBP3-220ENST00000599429 SOGA1O94964 1423 aa31.17■■■□□ 2.58
GTPBP3-220ENST00000599429 RAD54L2Q9Y4B4 1467 aa31.16■■■□□ 2.58
GTPBP3-220ENST00000599429 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.572e-8■■■■■ 36.7
GTPBP3-220ENST00000599429 EIF4G3O43432 1585 aaKnown RBP31.08■■■□□ 2.57
GTPBP3-220ENST00000599429 WRNQ14191 1432 aaPredicted RBP eCLIP31.06■■■□□ 2.56
GTPBP3-220ENST00000599429 TDRD9Q8NDG6 1382 aaKnown RBP31.02■■■□□ 2.56
GTPBP3-220ENST00000599429 TOP2BQ02880 1626 aa30.98■■■□□ 2.55
GTPBP3-220ENST00000599429 SYNJ1O43426 1573 aa30.97■■■□□ 2.55
GTPBP3-220ENST00000599429 BIVM-ERCC5R4GMW8 1640 aa30.97■■■□□ 2.55
GTPBP3-220ENST00000599429 WDR97A6NE52 1622 aa30.92■■■□□ 2.54
GTPBP3-220ENST00000599429 OSCARQ8IYS5 282 aa30.92■■■□□ 2.54
GTPBP3-220ENST00000599429 ABCA10Q8WWZ4 1543 aa30.88■■■□□ 2.53
GTPBP3-220ENST00000599429 GRIN2BQ13224 1484 aa30.79■■■□□ 2.52
GTPBP3-220ENST00000599429 GAPVD1Q14C86 1478 aa30.79■■■□□ 2.52
GTPBP3-220ENST00000599429 SNAPC4Q5SXM2 1469 aa30.76■■■□□ 2.51
GTPBP3-220ENST00000599429 ABCA5Q8WWZ7 1642 aa30.75■■■□□ 2.51
GTPBP3-220ENST00000599429 FBLN2P98095 1184 aa30.73■■■□□ 2.51
GTPBP3-220ENST00000599429 CHD1O14646 1710 aa30.72■■■□□ 2.51
GTPBP3-220ENST00000599429 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.51
GTPBP3-220ENST00000599429 PBRM1Q86U86 1689 aa30.7■■■□□ 2.5
GTPBP3-220ENST00000599429 CHMP7Q8WUX9 453 aaPredicted RBP30.63■■■□□ 2.49
GTPBP3-220ENST00000599429 SYNJ2O15056 1496 aa30.6■■■□□ 2.49
GTPBP3-220ENST00000599429 ERICH3Q5RHP9 1530 aa30.5■■■□□ 2.47
GTPBP3-220ENST00000599429 ADAMTS12P58397 1594 aa30.45■■■□□ 2.47
GTPBP3-220ENST00000599429 FHAD1B1AJZ9 1412 aa30.43■■■□□ 2.46
GTPBP3-220ENST00000599429 KIF27Q86VH2 1401 aa30.41■■■□□ 2.46
GTPBP3-220ENST00000599429 GRIN2AQ12879 1464 aa30.39■■■□□ 2.46
GTPBP3-220ENST00000599429 CLASP1Q7Z460 1538 aa30.39■■■□□ 2.46
GTPBP3-220ENST00000599429 RIMBP3CA6NJZ7 1639 aa30.39■■■□□ 2.46
GTPBP3-220ENST00000599429 RIMBP3BA6NNM3 1639 aa30.39■■■□□ 2.46
GTPBP3-220ENST00000599429 RIMBP3Q9UFD9 1639 aa30.39■■■□□ 2.46
GTPBP3-220ENST00000599429 ARHGEF11O15085 1522 aa30.37■■■□□ 2.45
GTPBP3-220ENST00000599429 IGF1RP08069 1367 aa30.35■■■□□ 2.45
GTPBP3-220ENST00000599429 TRIM41Q8WV44 630 aa30.31■■■□□ 2.44
GTPBP3-220ENST00000599429 NUP160Q12769 1436 aa30.27■■■□□ 2.44
GTPBP3-220ENST00000599429 CEP170Q5SW79 1584 aa30.24■■■□□ 2.43
GTPBP3-220ENST00000599429 CUL7Q14999 1698 aa30.19■■■□□ 2.42
GTPBP3-220ENST00000599429 CYB5RLQ6IPT4 315 aa30.16■■■□□ 2.42
GTPBP3-220ENST00000599429 RUSC2Q8N2Y8 1516 aa30.16■■■□□ 2.42
GTPBP3-220ENST00000599429 CARMIL1Q5VZK9 1371 aa30.15■■■□□ 2.42
GTPBP3-220ENST00000599429 ARAP1Q96P48 1450 aa30.13■■■□□ 2.41
GTPBP3-220ENST00000599429 SHROOM2Q13796 1616 aa30.04■■■□□ 2.4
GTPBP3-220ENST00000599429 JPH4Q96JJ6 628 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms