RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 NISCHQ9Y2I1 1504 aa24.07■■□□□ 1.44
LINC00649-210ENST00000599421 ABCC9O60706 1549 aa22.06■■□□□ 1.12
LINC00649-210ENST00000599421 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
LINC00649-210ENST00000599421 DNAJC5BQ9UF47 199 aa20.99■□□□□ 0.95
LINC00649-210ENST00000599421 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.93
LINC00649-210ENST00000599421 NACADO15069 1562 aa20.67■□□□□ 0.9
LINC00649-210ENST00000599421 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
LINC00649-210ENST00000599421 PABPN1Q86U42 306 aaKnown RBP eCLIP20.46■□□□□ 0.87
LINC00649-210ENST00000599421 DCAF8L2P0C7V8 631 aa20.38■□□□□ 0.85
LINC00649-210ENST00000599421 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
LINC00649-210ENST00000599421 MYO15BQ96JP2 1530 aa20.28■□□□□ 0.84
LINC00649-210ENST00000599421 SHROOM4Q9ULL8 1493 aa20.01■□□□□ 0.79
LINC00649-210ENST00000599421 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
LINC00649-210ENST00000599421 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
LINC00649-210ENST00000599421 ZCCHC6Q5VYS8 1495 aaKnown RBP19.89■□□□□ 0.77
LINC00649-210ENST00000599421 DCAF1Q9Y4B6 1507 aa19.89■□□□□ 0.77
LINC00649-210ENST00000599421 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.76
LINC00649-210ENST00000599421 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
LINC00649-210ENST00000599421 DNAJC5Q9H3Z4 198 aa19.55■□□□□ 0.72
LINC00649-210ENST00000599421 CUX2O14529 1486 aa19.2■□□□□ 0.66
LINC00649-210ENST00000599421 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
LINC00649-210ENST00000599421 NCAPD3P42695 1498 aa19.07■□□□□ 0.64
LINC00649-210ENST00000599421 ATAD2BQ9ULI0 1458 aa18.96■□□□□ 0.63
LINC00649-210ENST00000599421 HMGXB3Q12766 1538 aa18.91■□□□□ 0.62
LINC00649-210ENST00000599421 SMARCA2P51531 1590 aa18.9■□□□□ 0.62
LINC00649-210ENST00000599421 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
LINC00649-210ENST00000599421 NESP48681 1621 aa18.86■□□□□ 0.61
LINC00649-210ENST00000599421 THOC2Q8NI27 1593 aaKnown RBP18.78■□□□□ 0.6
LINC00649-210ENST00000599421 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
LINC00649-210ENST00000599421 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
LINC00649-210ENST00000599421 LAMC3Q9Y6N6 1575 aa18.71■□□□□ 0.59
LINC00649-210ENST00000599421 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
LINC00649-210ENST00000599421 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
LINC00649-210ENST00000599421 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
LINC00649-210ENST00000599421 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
LINC00649-210ENST00000599421 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
LINC00649-210ENST00000599421 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.54
LINC00649-210ENST00000599421 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
LINC00649-210ENST00000599421 WDR62O43379 1518 aa18.44■□□□□ 0.54
LINC00649-210ENST00000599421 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
LINC00649-210ENST00000599421 WIZO95785 1651 aa18.31■□□□□ 0.52
LINC00649-210ENST00000599421 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
LINC00649-210ENST00000599421 OSCARQ8IYS5 282 aa18.22■□□□□ 0.51
LINC00649-210ENST00000599421 CFTRP13569 1480 aa18.19■□□□□ 0.5
LINC00649-210ENST00000599421 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
LINC00649-210ENST00000599421 RIMBP3CA6NJZ7 1639 aa18.06■□□□□ 0.48
LINC00649-210ENST00000599421 RIMBP3BA6NNM3 1639 aa18.06■□□□□ 0.48
LINC00649-210ENST00000599421 RIMBP3Q9UFD9 1639 aa18.06■□□□□ 0.48
LINC00649-210ENST00000599421 TOP2AP11388 1531 aaKnown RBP18.06■□□□□ 0.48
LINC00649-210ENST00000599421 PRDM2Q13029 1718 aa18.05■□□□□ 0.48
LINC00649-210ENST00000599421 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
LINC00649-210ENST00000599421 ARHGEF11O15085 1522 aa17.97■□□□□ 0.47
LINC00649-210ENST00000599421 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
LINC00649-210ENST00000599421 ZNF608Q9ULD9 1512 aaPredicted RBP17.96■□□□□ 0.47
LINC00649-210ENST00000599421 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
LINC00649-210ENST00000599421 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
LINC00649-210ENST00000599421 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
LINC00649-210ENST00000599421 CHD1O14646 1710 aa17.82■□□□□ 0.44
LINC00649-210ENST00000599421 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
LINC00649-210ENST00000599421 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
LINC00649-210ENST00000599421 DNMBPQ6XZF7 1577 aa17.79■□□□□ 0.44
LINC00649-210ENST00000599421 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
LINC00649-210ENST00000599421 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
LINC00649-210ENST00000599421 AQRO60306 1485 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC00649-210ENST00000599421 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.43
LINC00649-210ENST00000599421 POLA1P09884 1462 aaPredicted RBP17.68■□□□□ 0.42
LINC00649-210ENST00000599421 FBLN2P98095 1184 aa17.66■□□□□ 0.42
LINC00649-210ENST00000599421 RAD54L2Q9Y4B4 1467 aa17.59■□□□□ 0.41
LINC00649-210ENST00000599421 WDR97A6NE52 1622 aa17.58■□□□□ 0.41
LINC00649-210ENST00000599421 CLASP1Q7Z460 1538 aa17.58■□□□□ 0.41
LINC00649-210ENST00000599421 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
LINC00649-210ENST00000599421 SOGA1O94964 1423 aa17.56■□□□□ 0.4
LINC00649-210ENST00000599421 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
LINC00649-210ENST00000599421 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
LINC00649-210ENST00000599421 MAGI1Q96QZ7 1491 aaPredicted RBP17.52■□□□□ 0.4
LINC00649-210ENST00000599421 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
LINC00649-210ENST00000599421 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
LINC00649-210ENST00000599421 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
LINC00649-210ENST00000599421 SYNJ2O15056 1496 aa17.46■□□□□ 0.39
LINC00649-210ENST00000599421 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
LINC00649-210ENST00000599421 CUX1P39880 1505 aa17.44■□□□□ 0.38
LINC00649-210ENST00000599421 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
LINC00649-210ENST00000599421 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
LINC00649-210ENST00000599421 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
LINC00649-210ENST00000599421 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
LINC00649-210ENST00000599421 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.35
LINC00649-210ENST00000599421 GRIN2AQ12879 1464 aa17.24■□□□□ 0.35
LINC00649-210ENST00000599421 CEP170Q5SW79 1584 aa17.22■□□□□ 0.35
LINC00649-210ENST00000599421 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
LINC00649-210ENST00000599421 NUP160Q12769 1436 aa17.21■□□□□ 0.34
LINC00649-210ENST00000599421 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
LINC00649-210ENST00000599421 KIF13AQ9H1H9 1805 aa17.18■□□□□ 0.34
LINC00649-210ENST00000599421 WRNQ14191 1432 aaPredicted RBP eCLIP17.14■□□□□ 0.33
LINC00649-210ENST00000599421 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
LINC00649-210ENST00000599421 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
LINC00649-210ENST00000599421 TOP2BQ02880 1626 aa17.08■□□□□ 0.32
LINC00649-210ENST00000599421 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
LINC00649-210ENST00000599421 SUPT5HO00267 1087 aaKnown RBP17.07■□□□□ 0.32
LINC00649-210ENST00000599421 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
LINC00649-210ENST00000599421 ABCC10Q5T3U5 1492 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms