RNA–Protein interactions for RNA: ENST00000599373.5

DDX49-209, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-209ENST00000599373 NISCHQ9Y2I1 1504 aa41.03■■■■■ 4.16
DDX49-209ENST00000599373 ABCC9O60706 1549 aa37.94■■■■□ 3.66
DDX49-209ENST00000599373 CCDC180Q9P1Z9 1646 aa37.07■■■■□ 3.52
DDX49-209ENST00000599373 DNAJC5BQ9UF47 199 aa36.38■■■■□ 3.41
DDX49-209ENST00000599373 RB1CC1Q8TDY2 1594 aa35.66■■■■□ 3.3
DDX49-209ENST00000599373 PABPN1Q86U42 306 aaKnown RBP eCLIP35.25■■■■□ 3.23
DDX49-209ENST00000599373 NACADO15069 1562 aa35.23■■■■□ 3.23
DDX49-209ENST00000599373 DCAF8L2P0C7V8 631 aa35.02■■■■□ 3.2
DDX49-209ENST00000599373 UNC13AQ9UPW8 1703 aa34.97■■■■□ 3.19
DDX49-209ENST00000599373 BICRAQ9NZM4 1560 aa34.78■■■■□ 3.16
DDX49-209ENST00000599373 MYO15BQ96JP2 1530 aa34.45■■■■□ 3.11
DDX49-209ENST00000599373 CECR2Q9BXF3 1484 aa34.21■■■■□ 3.07
DDX49-209ENST00000599373 CC2D2AQ9P2K1 1620 aa34.21■■■■□ 3.07
DDX49-209ENST00000599373 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.04
DDX49-209ENST00000599373 EIF4G1Q04637 1599 aaKnown RBP33.92■■■■□ 3.02
DDX49-209ENST00000599373 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
DDX49-209ENST00000599373 SCRIBQ14160 1630 aa33.83■■■■□ 3.01
DDX49-209ENST00000599373 DNAJC5Q9H3Z4 198 aa33.83■■■■□ 3.01
DDX49-209ENST00000599373 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
DDX49-209ENST00000599373 CUX2O14529 1486 aa32.89■■■□□ 2.86
DDX49-209ENST00000599373 ERCC6Q03468 1493 aa32.72■■■□□ 2.83
DDX49-209ENST00000599373 NCAPD3P42695 1498 aa32.58■■■□□ 2.81
DDX49-209ENST00000599373 NESP48681 1621 aa32.42■■■□□ 2.78
DDX49-209ENST00000599373 ATAD2BQ9ULI0 1458 aa32.41■■■□□ 2.78
DDX49-209ENST00000599373 HMGXB3Q12766 1538 aa32.23■■■□□ 2.75
DDX49-209ENST00000599373 SMARCA2P51531 1590 aa32.19■■■□□ 2.74
DDX49-209ENST00000599373 THOC2Q8NI27 1593 aaKnown RBP32.17■■■□□ 2.74
DDX49-209ENST00000599373 SMARCA4P51532 1647 aa32.17■■■□□ 2.74
DDX49-209ENST00000599373 TRIM41Q8WV44 630 aa32.06■■■□□ 2.72
DDX49-209ENST00000599373 BAZ1BQ9UIG0 1483 aaKnown RBP32■■■□□ 2.71
DDX49-209ENST00000599373 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
DDX49-209ENST00000599373 LAMC3Q9Y6N6 1575 aa31.92■■■□□ 2.7
DDX49-209ENST00000599373 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
DDX49-209ENST00000599373 PEG3Q9GZU2 1588 aa31.82■■■□□ 2.68
DDX49-209ENST00000599373 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
DDX49-209ENST00000599373 MROH2BQ7Z745 1585 aa31.67■■■□□ 2.66
DDX49-209ENST00000599373 MRC2Q9UBG0 1479 aa31.57■■■□□ 2.64
DDX49-209ENST00000599373 CADPSQ9ULU8 1353 aa31.56■■■□□ 2.64
DDX49-209ENST00000599373 WDR62O43379 1518 aa31.52■■■□□ 2.64
DDX49-209ENST00000599373 OSCARQ8IYS5 282 aa31.31■■■□□ 2.6
DDX49-209ENST00000599373 CEP164Q9UPV0 1460 aa31.27■■■□□ 2.6
DDX49-209ENST00000599373 WIZO95785 1651 aa31.25■■■□□ 2.59
DDX49-209ENST00000599373 FANCD2Q9BXW9 1451 aa31.21■■■□□ 2.59
DDX49-209ENST00000599373 URB2Q14146 1524 aaKnown RBP31.06■■■□□ 2.56
DDX49-209ENST00000599373 CFTRP13569 1480 aa31.04■■■□□ 2.56
DDX49-209ENST00000599373 RIMBP3CA6NJZ7 1639 aa31.03■■■□□ 2.56
DDX49-209ENST00000599373 RIMBP3BA6NNM3 1639 aa31.03■■■□□ 2.56
DDX49-209ENST00000599373 RIMBP3Q9UFD9 1639 aa31.03■■■□□ 2.56
DDX49-209ENST00000599373 ARHGEF11O15085 1522 aa30.84■■■□□ 2.53
DDX49-209ENST00000599373 ZNF608Q9ULD9 1512 aaPredicted RBP30.83■■■□□ 2.53
DDX49-209ENST00000599373 TOP2AP11388 1531 aaKnown RBP30.73■■■□□ 2.51
DDX49-209ENST00000599373 RSF1Q96T23 1441 aaPredicted RBP30.72■■■□□ 2.51
DDX49-209ENST00000599373 CYB5RLQ6IPT4 315 aa30.69■■■□□ 2.5
DDX49-209ENST00000599373 IFT140Q96RY7 1462 aa30.68■■■□□ 2.5
DDX49-209ENST00000599373 PRDM2Q13029 1718 aa30.62■■■□□ 2.49
DDX49-209ENST00000599373 TRHP20396 242 aaPredicted RBP30.55■■■□□ 2.48
DDX49-209ENST00000599373 TOPBP1Q92547 1522 aa30.55■■■□□ 2.48
DDX49-209ENST00000599373 EIF4G3O43432 1585 aaKnown RBP30.54■■■□□ 2.48
DDX49-209ENST00000599373 ARAP1Q96P48 1450 aa30.51■■■□□ 2.48
DDX49-209ENST00000599373 CHD1O14646 1710 aa30.47■■■□□ 2.47
DDX49-209ENST00000599373 CCDC88BA6NC98 1476 aa30.45■■■□□ 2.47
DDX49-209ENST00000599373 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.46
DDX49-209ENST00000599373 FBLN2P98095 1184 aa30.35■■■□□ 2.45
DDX49-209ENST00000599373 TARBP1Q13395 1621 aaKnown RBP30.35■■■□□ 2.45
DDX49-209ENST00000599373 DNMBPQ6XZF7 1577 aa30.33■■■□□ 2.45
DDX49-209ENST00000599373 ABCC8Q09428 1581 aa30.32■■■□□ 2.44
DDX49-209ENST00000599373 SUPT5HO00267 1087 aaKnown RBP30.21■■■□□ 2.43
DDX49-209ENST00000599373 POLA1P09884 1462 aaPredicted RBP30.19■■■□□ 2.42
DDX49-209ENST00000599373 AEBP2Q6ZN18 517 aaPredicted RBP30.17■■■□□ 2.42
DDX49-209ENST00000599373 RAD54L2Q9Y4B4 1467 aa30.16■■■□□ 2.42
DDX49-209ENST00000599373 TDRD9Q8NDG6 1382 aaKnown RBP30.13■■■□□ 2.41
DDX49-209ENST00000599373 CLASP1Q7Z460 1538 aa30.1■■■□□ 2.41
DDX49-209ENST00000599373 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
DDX49-209ENST00000599373 SOGA1O94964 1423 aa30.03■■■□□ 2.4
DDX49-209ENST00000599373 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
DDX49-209ENST00000599373 SYNJ1O43426 1573 aa29.94■■■□□ 2.38
DDX49-209ENST00000599373 FGD5Q6ZNL6 1462 aa29.9■■■□□ 2.38
DDX49-209ENST00000599373 MAGI1Q96QZ7 1491 aaPredicted RBP29.87■■■□□ 2.37
DDX49-209ENST00000599373 WDR97A6NE52 1622 aa29.84■■■□□ 2.37
DDX49-209ENST00000599373 GRIN2BQ13224 1484 aa29.82■■■□□ 2.36
DDX49-209ENST00000599373 GAPVD1Q14C86 1478 aa29.82■■■□□ 2.36
DDX49-209ENST00000599373 SYNJ2O15056 1496 aa29.81■■■□□ 2.36
DDX49-209ENST00000599373 CUX1P39880 1505 aa29.78■■■□□ 2.36
DDX49-209ENST00000599373 PBRM1Q86U86 1689 aa29.68■■■□□ 2.34
DDX49-209ENST00000599373 ERCC6L2Q5T890 1561 aa29.68■■■□□ 2.34
DDX49-209ENST00000599373 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
DDX49-209ENST00000599373 ABCA10Q8WWZ4 1543 aa29.48■■■□□ 2.31
DDX49-209ENST00000599373 CEP170Q5SW79 1584 aa29.47■■■□□ 2.31
DDX49-209ENST00000599373 GRIN2AQ12879 1464 aa29.46■■■□□ 2.31
DDX49-209ENST00000599373 KIF13AQ9H1H9 1805 aa29.42■■■□□ 2.3
DDX49-209ENST00000599373 NUP160Q12769 1436 aa29.39■■■□□ 2.3
DDX49-209ENST00000599373 SHROOM2Q13796 1616 aa29.35■■■□□ 2.29
DDX49-209ENST00000599373 ADAMTS12P58397 1594 aa29.35■■■□□ 2.29
DDX49-209ENST00000599373 FHAD1B1AJZ9 1412 aa29.21■■■□□ 2.27
DDX49-209ENST00000599373 WRNQ14191 1432 aaPredicted RBP eCLIP29.19■■■□□ 2.26
DDX49-209ENST00000599373 PRG4Q92954 1404 aaPredicted RBP29.19■■■□□ 2.26
DDX49-209ENST00000599373 CHIC1Q5VXU3 224 aa29.18■■■□□ 2.26
DDX49-209ENST00000599373 FAM69CQ0P6D2 419 aa29.16■■■□□ 2.26
DDX49-209ENST00000599373 ABCC10Q5T3U5 1492 aa29.13■■■□□ 2.25
DDX49-209ENST00000599373 KDM4FA0A1W2PPD8 638 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms