RNA–Protein interactions for RNA: ENST00000599310.5

SMIM7-217, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,123 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-217ENST00000599310 NISCHQ9Y2I1 1504 aa40.16■■■■■ 4.02
SMIM7-217ENST00000599310 CCDC180Q9P1Z9 1646 aa35.86■■■■□ 3.33
SMIM7-217ENST00000599310 ABCC9O60706 1549 aa35.57■■■■□ 3.28
SMIM7-217ENST00000599310 RB1CC1Q8TDY2 1594 aa33.91■■■■□ 3.02
SMIM7-217ENST00000599310 NACADO15069 1562 aa33.81■■■■□ 3
SMIM7-217ENST00000599310 DCAF8L2P0C7V8 631 aa33.72■■■□□ 2.99
SMIM7-217ENST00000599310 MYO15BQ96JP2 1530 aa33.51■■■□□ 2.95
SMIM7-217ENST00000599310 DNAJC5BQ9UF47 199 aa33.43■■■□□ 2.94
SMIM7-217ENST00000599310 ZCCHC6Q5VYS8 1495 aaKnown RBP33.38■■■□□ 2.93
SMIM7-217ENST00000599310 DCAF1Q9Y4B6 1507 aa33.25■■■□□ 2.91
SMIM7-217ENST00000599310 UNC13AQ9UPW8 1703 aa33.23■■■□□ 2.91
SMIM7-217ENST00000599310 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
SMIM7-217ENST00000599310 BICRAQ9NZM4 1560 aa32.99■■■□□ 2.87
SMIM7-217ENST00000599310 SCRIBQ14160 1630 aa32.65■■■□□ 2.82
SMIM7-217ENST00000599310 SHROOM4Q9ULL8 1493 aa32.57■■■□□ 2.8
SMIM7-217ENST00000599310 CC2D2AQ9P2K1 1620 aa32.17■■■□□ 2.74
SMIM7-217ENST00000599310 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
SMIM7-217ENST00000599310 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
SMIM7-217ENST00000599310 SMARCA4P51532 1647 aa31.21■■■□□ 2.59
SMIM7-217ENST00000599310 BAZ1AQ9NRL2 1556 aaPredicted RBP31.19■■■□□ 2.58
SMIM7-217ENST00000599310 NCAPD3P42695 1498 aa31.16■■■□□ 2.58
SMIM7-217ENST00000599310 SMARCA2P51531 1590 aa31.13■■■□□ 2.57
SMIM7-217ENST00000599310 ATAD2BQ9ULI0 1458 aa31.12■■■□□ 2.57
SMIM7-217ENST00000599310 HMGXB3Q12766 1538 aa31■■■□□ 2.55
SMIM7-217ENST00000599310 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
SMIM7-217ENST00000599310 MROH2BQ7Z745 1585 aa30.9■■■□□ 2.54
SMIM7-217ENST00000599310 BAZ1BQ9UIG0 1483 aaKnown RBP30.89■■■□□ 2.54
SMIM7-217ENST00000599310 CUX2O14529 1486 aa30.64■■■□□ 2.5
SMIM7-217ENST00000599310 ERCC6Q03468 1493 aa30.63■■■□□ 2.49
SMIM7-217ENST00000599310 DNAJC5Q9H3Z4 198 aa30.61■■■□□ 2.49
SMIM7-217ENST00000599310 NESP48681 1621 aa30.6■■■□□ 2.49
SMIM7-217ENST00000599310 WIZO95785 1651 aa30.55■■■□□ 2.48
SMIM7-217ENST00000599310 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
SMIM7-217ENST00000599310 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
SMIM7-217ENST00000599310 THOC2Q8NI27 1593 aaKnown RBP30.32■■■□□ 2.45
SMIM7-217ENST00000599310 TOP2AP11388 1531 aaKnown RBP30.27■■■□□ 2.44
SMIM7-217ENST00000599310 PDS5BQ9NTI5 1447 aa30.25■■■□□ 2.43
SMIM7-217ENST00000599310 CADPSQ9ULU8 1353 aa30.25■■■□□ 2.43
SMIM7-217ENST00000599310 KIF21AQ7Z4S6 1674 aa30.23■■■□□ 2.43
SMIM7-217ENST00000599310 CFTRP13569 1480 aa29.99■■■□□ 2.39
SMIM7-217ENST00000599310 MRC2Q9UBG0 1479 aa29.92■■■□□ 2.38
SMIM7-217ENST00000599310 CEP164Q9UPV0 1460 aa29.92■■■□□ 2.38
SMIM7-217ENST00000599310 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
SMIM7-217ENST00000599310 CCDC88BA6NC98 1476 aa29.88■■■□□ 2.37
SMIM7-217ENST00000599310 WDR62O43379 1518 aa29.88■■■□□ 2.37
SMIM7-217ENST00000599310 PRDM2Q13029 1718 aa29.74■■■□□ 2.35
SMIM7-217ENST00000599310 URB2Q14146 1524 aaKnown RBP29.57■■■□□ 2.32
SMIM7-217ENST00000599310 SUPT5HO00267 1087 aaKnown RBP29.54■■■□□ 2.32
SMIM7-217ENST00000599310 ABCC8Q09428 1581 aa29.46■■■□□ 2.31
SMIM7-217ENST00000599310 TOPBP1Q92547 1522 aa29.37■■■□□ 2.29
SMIM7-217ENST00000599310 DNMBPQ6XZF7 1577 aa29.34■■■□□ 2.29
SMIM7-217ENST00000599310 IFT140Q96RY7 1462 aa29.3■■■□□ 2.28
SMIM7-217ENST00000599310 ZNF608Q9ULD9 1512 aaPredicted RBP29.2■■■□□ 2.26
SMIM7-217ENST00000599310 TRIM41Q8WV44 630 aa29.18■■■□□ 2.26
SMIM7-217ENST00000599310 OSCARQ8IYS5 282 aa29.17■■■□□ 2.26
SMIM7-217ENST00000599310 POLA1P09884 1462 aaPredicted RBP29.1■■■□□ 2.25
SMIM7-217ENST00000599310 TARBP1Q13395 1621 aaKnown RBP29.04■■■□□ 2.24
SMIM7-217ENST00000599310 EIF4G3O43432 1585 aaKnown RBP29.03■■■□□ 2.24
SMIM7-217ENST00000599310 SOGA1O94964 1423 aa29.02■■■□□ 2.24
SMIM7-217ENST00000599310 CUX1P39880 1505 aa29.01■■■□□ 2.23
SMIM7-217ENST00000599310 FGD5Q6ZNL6 1462 aa28.99■■■□□ 2.23
SMIM7-217ENST00000599310 RAD54L2Q9Y4B4 1467 aa28.94■■■□□ 2.22
SMIM7-217ENST00000599310 AQRO60306 1485 aaKnown RBP eCLIP28.92■■■□□ 2.22
SMIM7-217ENST00000599310 RIMBP3CA6NJZ7 1639 aa28.91■■■□□ 2.22
SMIM7-217ENST00000599310 RIMBP3BA6NNM3 1639 aa28.91■■■□□ 2.22
SMIM7-217ENST00000599310 RIMBP3Q9UFD9 1639 aa28.91■■■□□ 2.22
SMIM7-217ENST00000599310 WDR97A6NE52 1622 aa28.91■■■□□ 2.22
SMIM7-217ENST00000599310 TDRD9Q8NDG6 1382 aaKnown RBP28.84■■■□□ 2.21
SMIM7-217ENST00000599310 CHD1O14646 1710 aa28.83■■■□□ 2.21
SMIM7-217ENST00000599310 ARHGEF11O15085 1522 aa28.8■■■□□ 2.2
SMIM7-217ENST00000599310 WRNQ14191 1432 aaPredicted RBP eCLIP28.8■■■□□ 2.2
SMIM7-217ENST00000599310 TOP2BQ02880 1626 aa28.73■■■□□ 2.19
SMIM7-217ENST00000599310 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
SMIM7-217ENST00000599310 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
SMIM7-217ENST00000599310 FBLN2P98095 1184 aa28.72■■■□□ 2.19
SMIM7-217ENST00000599310 ABCA10Q8WWZ4 1543 aa28.72■■■□□ 2.19
SMIM7-217ENST00000599310 SNAPC4Q5SXM2 1469 aa28.68■■■□□ 2.18
SMIM7-217ENST00000599310 MAGI1Q96QZ7 1491 aaPredicted RBP28.68■■■□□ 2.18
SMIM7-217ENST00000599310 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
SMIM7-217ENST00000599310 SYNJ1O43426 1573 aa28.66■■■□□ 2.18
SMIM7-217ENST00000599310 CHMP7Q8WUX9 453 aaPredicted RBP28.61■■■□□ 2.17
SMIM7-217ENST00000599310 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
SMIM7-217ENST00000599310 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
SMIM7-217ENST00000599310 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
SMIM7-217ENST00000599310 ARAP1Q96P48 1450 aa28.54■■■□□ 2.16
SMIM7-217ENST00000599310 CLASP1Q7Z460 1538 aa28.51■■■□□ 2.15
SMIM7-217ENST00000599310 CYB5RLQ6IPT4 315 aa28.5■■■□□ 2.15
SMIM7-217ENST00000599310 ERICH3Q5RHP9 1530 aa28.39■■■□□ 2.14
SMIM7-217ENST00000599310 ADAMTS12P58397 1594 aa28.35■■■□□ 2.13
SMIM7-217ENST00000599310 FHAD1B1AJZ9 1412 aa28.35■■■□□ 2.13
SMIM7-217ENST00000599310 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
SMIM7-217ENST00000599310 KIF27Q86VH2 1401 aa28.25■■■□□ 2.11
SMIM7-217ENST00000599310 NUP160Q12769 1436 aa28.19■■■□□ 2.1
SMIM7-217ENST00000599310 CEP170Q5SW79 1584 aa28.15■■■□□ 2.1
SMIM7-217ENST00000599310 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
SMIM7-217ENST00000599310 IGF1RP08069 1367 aa28.1■■■□□ 2.09
SMIM7-217ENST00000599310 CUL7Q14999 1698 aa28.1■■■□□ 2.09
SMIM7-217ENST00000599310 ERCC6L2Q5T890 1561 aa28.08■■■□□ 2.09
SMIM7-217ENST00000599310 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
SMIM7-217ENST00000599310 CARMIL1Q5VZK9 1371 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms