RNA–Protein interactions for RNA: ENST00000599225.1

LTBP4-225, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 281 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-225ENST00000599225 NISCHQ9Y2I1 1504 aa40.21■■■■■ 4.03
LTBP4-225ENST00000599225 CCDC180Q9P1Z9 1646 aa35.94■■■■□ 3.34
LTBP4-225ENST00000599225 ABCC9O60706 1549 aa35.63■■■■□ 3.29
LTBP4-225ENST00000599225 RB1CC1Q8TDY2 1594 aa34.08■■■■□ 3.05
LTBP4-225ENST00000599225 NACADO15069 1562 aa33.96■■■■□ 3.03
LTBP4-225ENST00000599225 DCAF8L2P0C7V8 631 aa33.71■■■□□ 2.99
LTBP4-225ENST00000599225 MYO15BQ96JP2 1530 aa33.67■■■□□ 2.98
LTBP4-225ENST00000599225 ZCCHC6Q5VYS8 1495 aaKnown RBP33.38■■■□□ 2.93
LTBP4-225ENST00000599225 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
LTBP4-225ENST00000599225 DNAJC5BQ9UF47 199 aa33.28■■■□□ 2.92
LTBP4-225ENST00000599225 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
LTBP4-225ENST00000599225 PABPN1Q86U42 306 aaKnown RBP eCLIP33.24■■■□□ 2.91
LTBP4-225ENST00000599225 BICRAQ9NZM4 1560 aa33.1■■■□□ 2.89
LTBP4-225ENST00000599225 SHROOM4Q9ULL8 1493 aa32.77■■■□□ 2.84
LTBP4-225ENST00000599225 SCRIBQ14160 1630 aa32.69■■■□□ 2.82
LTBP4-225ENST00000599225 EIF4G1Q04637 1599 aaKnown RBP32.24■■■□□ 2.75
LTBP4-225ENST00000599225 CC2D2AQ9P2K1 1620 aa32.22■■■□□ 2.75
LTBP4-225ENST00000599225 CECR2Q9BXF3 1484 aa32.12■■■□□ 2.73
LTBP4-225ENST00000599225 NCAPD3P42695 1498 aa31.39■■■□□ 2.62
LTBP4-225ENST00000599225 ATAD2BQ9ULI0 1458 aa31.29■■■□□ 2.6
LTBP4-225ENST00000599225 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
LTBP4-225ENST00000599225 SMARCA2P51531 1590 aa31.2■■■□□ 2.58
LTBP4-225ENST00000599225 BAZ1AQ9NRL2 1556 aaPredicted RBP31.19■■■□□ 2.58
LTBP4-225ENST00000599225 HMGXB3Q12766 1538 aa31.14■■■□□ 2.57
LTBP4-225ENST00000599225 PEG3Q9GZU2 1588 aa31.05■■■□□ 2.56
LTBP4-225ENST00000599225 MROH2BQ7Z745 1585 aa30.96■■■□□ 2.55
LTBP4-225ENST00000599225 BAZ1BQ9UIG0 1483 aaKnown RBP30.95■■■□□ 2.55
LTBP4-225ENST00000599225 ERCC6Q03468 1493 aa30.75■■■□□ 2.51
LTBP4-225ENST00000599225 NESP48681 1621 aa30.7■■■□□ 2.51
LTBP4-225ENST00000599225 CUX2O14529 1486 aa30.69■■■□□ 2.5
LTBP4-225ENST00000599225 LAMC3Q9Y6N6 1575 aa30.58■■■□□ 2.49
LTBP4-225ENST00000599225 WIZO95785 1651 aa30.55■■■□□ 2.48
LTBP4-225ENST00000599225 RSF1Q96T23 1441 aaPredicted RBP30.46■■■□□ 2.47
LTBP4-225ENST00000599225 CADPSQ9ULU8 1353 aa30.43■■■□□ 2.46
LTBP4-225ENST00000599225 PDS5BQ9NTI5 1447 aa30.42■■■□□ 2.46
LTBP4-225ENST00000599225 DNAJC5Q9H3Z4 198 aa30.4■■■□□ 2.46
LTBP4-225ENST00000599225 THOC2Q8NI27 1593 aaKnown RBP30.35■■■□□ 2.45
LTBP4-225ENST00000599225 KIF21AQ7Z4S6 1674 aa30.27■■■□□ 2.44
LTBP4-225ENST00000599225 TOP2AP11388 1531 aaKnown RBP30.23■■■□□ 2.43
LTBP4-225ENST00000599225 CFTRP13569 1480 aa30.14■■■□□ 2.42
LTBP4-225ENST00000599225 MRC2Q9UBG0 1479 aa30.1■■■□□ 2.41
LTBP4-225ENST00000599225 WDR62O43379 1518 aa30.03■■■□□ 2.4
LTBP4-225ENST00000599225 FANCD2Q9BXW9 1451 aa30.03■■■□□ 2.4
LTBP4-225ENST00000599225 CEP164Q9UPV0 1460 aa30.02■■■□□ 2.4
LTBP4-225ENST00000599225 CCDC88BA6NC98 1476 aa29.91■■■□□ 2.38
LTBP4-225ENST00000599225 URB2Q14146 1524 aaKnown RBP29.76■■■□□ 2.36
LTBP4-225ENST00000599225 PRDM2Q13029 1718 aa29.74■■■□□ 2.35
LTBP4-225ENST00000599225 TOPBP1Q92547 1522 aa29.5■■■□□ 2.31
LTBP4-225ENST00000599225 ABCC8Q09428 1581 aa29.49■■■□□ 2.31
LTBP4-225ENST00000599225 IFT140Q96RY7 1462 aa29.45■■■□□ 2.31
LTBP4-225ENST00000599225 DNMBPQ6XZF7 1577 aa29.39■■■□□ 2.3
LTBP4-225ENST00000599225 ZNF608Q9ULD9 1512 aaPredicted RBP29.35■■■□□ 2.29
LTBP4-225ENST00000599225 OSCARQ8IYS5 282 aa29.34■■■□□ 2.29
LTBP4-225ENST00000599225 TARBP1Q13395 1621 aaKnown RBP29.21■■■□□ 2.27
LTBP4-225ENST00000599225 POLA1P09884 1462 aaPredicted RBP29.21■■■□□ 2.27
LTBP4-225ENST00000599225 SUPT5HO00267 1087 aaKnown RBP29.2■■■□□ 2.26
LTBP4-225ENST00000599225 EIF4G3O43432 1585 aaKnown RBP29.15■■■□□ 2.26
LTBP4-225ENST00000599225 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.25
LTBP4-225ENST00000599225 SOGA1O94964 1423 aa29.09■■■□□ 2.25
LTBP4-225ENST00000599225 CUX1P39880 1505 aa29.08■■■□□ 2.25
LTBP4-225ENST00000599225 RAD54L2Q9Y4B4 1467 aa29.07■■■□□ 2.24
LTBP4-225ENST00000599225 FGD5Q6ZNL6 1462 aa29.04■■■□□ 2.24
LTBP4-225ENST00000599225 TRIM41Q8WV44 630 aa29.02■■■□□ 2.24
LTBP4-225ENST00000599225 TDRD9Q8NDG6 1382 aaKnown RBP28.99■■■□□ 2.23
LTBP4-225ENST00000599225 WDR97A6NE52 1622 aa28.98■■■□□ 2.23
LTBP4-225ENST00000599225 CHD1O14646 1710 aa28.85■■■□□ 2.21
LTBP4-225ENST00000599225 RIMBP3CA6NJZ7 1639 aa28.84■■■□□ 2.21
LTBP4-225ENST00000599225 RIMBP3BA6NNM3 1639 aa28.84■■■□□ 2.21
LTBP4-225ENST00000599225 RIMBP3Q9UFD9 1639 aa28.84■■■□□ 2.21
LTBP4-225ENST00000599225 ARHGEF11O15085 1522 aa28.82■■■□□ 2.2
LTBP4-225ENST00000599225 GRIN2BQ13224 1484 aa28.81■■■□□ 2.2
LTBP4-225ENST00000599225 SNAPC4Q5SXM2 1469 aa28.81■■■□□ 2.2
LTBP4-225ENST00000599225 FBLN2P98095 1184 aa28.81■■■□□ 2.2
LTBP4-225ENST00000599225 MAGI1Q96QZ7 1491 aaPredicted RBP28.8■■■□□ 2.2
LTBP4-225ENST00000599225 ABCA10Q8WWZ4 1543 aa28.79■■■□□ 2.2
LTBP4-225ENST00000599225 GAPVD1Q14C86 1478 aa28.74■■■□□ 2.19
LTBP4-225ENST00000599225 WRNQ14191 1432 aaPredicted RBP eCLIP28.71■■■□□ 2.19
LTBP4-225ENST00000599225 CHMP7Q8WUX9 453 aaPredicted RBP28.71■■■□□ 2.19
LTBP4-225ENST00000599225 SYNJ2O15056 1496 aa28.69■■■□□ 2.18
LTBP4-225ENST00000599225 TOP2BQ02880 1626 aa28.69■■■□□ 2.18
LTBP4-225ENST00000599225 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
LTBP4-225ENST00000599225 BIVM-ERCC5R4GMW8 1640 aa28.66■■■□□ 2.18
LTBP4-225ENST00000599225 CLASP1Q7Z460 1538 aa28.63■■■□□ 2.17
LTBP4-225ENST00000599225 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
LTBP4-225ENST00000599225 PBRM1Q86U86 1689 aa28.61■■■□□ 2.17
LTBP4-225ENST00000599225 CYB5RLQ6IPT4 315 aa28.58■■■□□ 2.17
LTBP4-225ENST00000599225 ARAP1Q96P48 1450 aa28.56■■■□□ 2.16
LTBP4-225ENST00000599225 GRIN2AQ12879 1464 aa28.43■■■□□ 2.14
LTBP4-225ENST00000599225 ERICH3Q5RHP9 1530 aa28.43■■■□□ 2.14
LTBP4-225ENST00000599225 ADAMTS12P58397 1594 aa28.41■■■□□ 2.14
LTBP4-225ENST00000599225 FHAD1B1AJZ9 1412 aa28.41■■■□□ 2.14
LTBP4-225ENST00000599225 NUP160Q12769 1436 aa28.37■■■□□ 2.13
LTBP4-225ENST00000599225 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
LTBP4-225ENST00000599225 SHROOM2Q13796 1616 aa28.18■■■□□ 2.1
LTBP4-225ENST00000599225 IGF1RP08069 1367 aa28.15■■■□□ 2.1
LTBP4-225ENST00000599225 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
LTBP4-225ENST00000599225 ERCC6L2Q5T890 1561 aa28.15■■■□□ 2.1
LTBP4-225ENST00000599225 TRHP20396 242 aaPredicted RBP28.12■■■□□ 2.09
LTBP4-225ENST00000599225 JPH4Q96JJ6 628 aa28.08■■■□□ 2.09
LTBP4-225ENST00000599225 PRG4Q92954 1404 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms