RNA–Protein interactions for RNA: ENST00000599220.1

TMEM143-210, Transcript of transmembrane protein 143, humanhuman

TSL 3

Gene TMEM143, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-210ENST00000599220 NISCHQ9Y2I1 1504 aa41.2■■■■■ 4.19
TMEM143-210ENST00000599220 ABCC9O60706 1549 aa37.08■■■■□ 3.53
TMEM143-210ENST00000599220 CCDC180Q9P1Z9 1646 aa36.92■■■■□ 3.5
TMEM143-210ENST00000599220 RB1CC1Q8TDY2 1594 aa35.21■■■■□ 3.23
TMEM143-210ENST00000599220 NACADO15069 1562 aa34.96■■■■□ 3.19
TMEM143-210ENST00000599220 DCAF8L2P0C7V8 631 aa34.95■■■■□ 3.19
TMEM143-210ENST00000599220 DNAJC5BQ9UF47 199 aa34.84■■■■□ 3.17
TMEM143-210ENST00000599220 PABPN1Q86U42 306 aaKnown RBP eCLIP34.57■■■■□ 3.12
TMEM143-210ENST00000599220 MYO15BQ96JP2 1530 aa34.41■■■■□ 3.1
TMEM143-210ENST00000599220 UNC13AQ9UPW8 1703 aa34.4■■■■□ 3.1
TMEM143-210ENST00000599220 BICRAQ9NZM4 1560 aa34.19■■■■□ 3.06
TMEM143-210ENST00000599220 ZCCHC6Q5VYS8 1495 aaKnown RBP34.13■■■■□ 3.05
TMEM143-210ENST00000599220 DCAF1Q9Y4B6 1507 aa33.98■■■■□ 3.03
TMEM143-210ENST00000599220 SCRIBQ14160 1630 aa33.74■■■□□ 2.99
TMEM143-210ENST00000599220 SHROOM4Q9ULL8 1493 aa33.66■■■□□ 2.98
TMEM143-210ENST00000599220 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
TMEM143-210ENST00000599220 CECR2Q9BXF3 1484 aa33.38■■■□□ 2.93
TMEM143-210ENST00000599220 EIF4G1Q04637 1599 aaKnown RBP33.36■■■□□ 2.93
TMEM143-210ENST00000599220 NCAPD3P42695 1498 aa32.29■■■□□ 2.76
TMEM143-210ENST00000599220 ATAD2BQ9ULI0 1458 aa32.21■■■□□ 2.75
TMEM143-210ENST00000599220 SMARCA4P51532 1647 aa32.14■■■□□ 2.74
TMEM143-210ENST00000599220 SMARCA2P51531 1590 aa32.08■■■□□ 2.73
TMEM143-210ENST00000599220 ERCC6Q03468 1493 aa32.02■■■□□ 2.72
TMEM143-210ENST00000599220 HMGXB3Q12766 1538 aa32.01■■■□□ 2.72
TMEM143-210ENST00000599220 DNAJC5Q9H3Z4 198 aa31.99■■■□□ 2.71
TMEM143-210ENST00000599220 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
TMEM143-210ENST00000599220 CUX2O14529 1486 aa31.91■■■□□ 2.7
TMEM143-210ENST00000599220 BAZ1BQ9UIG0 1483 aaKnown RBP31.9■■■□□ 2.7
TMEM143-210ENST00000599220 NESP48681 1621 aa31.84■■■□□ 2.69
TMEM143-210ENST00000599220 PEG3Q9GZU2 1588 aa31.78■■■□□ 2.68
TMEM143-210ENST00000599220 MROH2BQ7Z745 1585 aa31.77■■■□□ 2.68
TMEM143-210ENST00000599220 LAMC3Q9Y6N6 1575 aa31.55■■■□□ 2.64
TMEM143-210ENST00000599220 THOC2Q8NI27 1593 aaKnown RBP31.46■■■□□ 2.63
TMEM143-210ENST00000599220 PDS5BQ9NTI5 1447 aa31.41■■■□□ 2.62
TMEM143-210ENST00000599220 WIZO95785 1651 aa31.39■■■□□ 2.62
TMEM143-210ENST00000599220 KIF21AQ7Z4S6 1674 aa31.38■■■□□ 2.61
TMEM143-210ENST00000599220 CADPSQ9ULU8 1353 aa31.33■■■□□ 2.61
TMEM143-210ENST00000599220 MRC2Q9UBG0 1479 aa31.13■■■□□ 2.57
TMEM143-210ENST00000599220 RSF1Q96T23 1441 aaPredicted RBP31.1■■■□□ 2.57
TMEM143-210ENST00000599220 WDR62O43379 1518 aa31.03■■■□□ 2.56
TMEM143-210ENST00000599220 CEP164Q9UPV0 1460 aa31.01■■■□□ 2.55
TMEM143-210ENST00000599220 FANCD2Q9BXW9 1451 aa30.98■■■□□ 2.55
TMEM143-210ENST00000599220 TOP2AP11388 1531 aaKnown RBP30.96■■■□□ 2.55
TMEM143-210ENST00000599220 CFTRP13569 1480 aa30.95■■■□□ 2.54
TMEM143-210ENST00000599220 URB2Q14146 1524 aaKnown RBP30.72■■■□□ 2.51
TMEM143-210ENST00000599220 CCDC88BA6NC98 1476 aa30.65■■■□□ 2.5
TMEM143-210ENST00000599220 TRIM41Q8WV44 630 aa30.65■■■□□ 2.5
TMEM143-210ENST00000599220 PRDM2Q13029 1718 aa30.58■■■□□ 2.49
TMEM143-210ENST00000599220 OSCARQ8IYS5 282 aa30.52■■■□□ 2.48
TMEM143-210ENST00000599220 TOPBP1Q92547 1522 aa30.38■■■□□ 2.45
TMEM143-210ENST00000599220 IFT140Q96RY7 1462 aa30.38■■■□□ 2.45
TMEM143-210ENST00000599220 ZNF608Q9ULD9 1512 aaPredicted RBP30.37■■■□□ 2.45
TMEM143-210ENST00000599220 ABCC8Q09428 1581 aa30.28■■■□□ 2.44
TMEM143-210ENST00000599220 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
TMEM143-210ENST00000599220 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
TMEM143-210ENST00000599220 AQRO60306 1485 aaKnown RBP eCLIP30.11■■■□□ 2.41
TMEM143-210ENST00000599220 TARBP1Q13395 1621 aaKnown RBP30.08■■■□□ 2.41
TMEM143-210ENST00000599220 RIMBP3CA6NJZ7 1639 aa30.07■■■□□ 2.4
TMEM143-210ENST00000599220 RIMBP3BA6NNM3 1639 aa30.07■■■□□ 2.4
TMEM143-210ENST00000599220 RIMBP3Q9UFD9 1639 aa30.07■■■□□ 2.4
TMEM143-210ENST00000599220 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
TMEM143-210ENST00000599220 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
TMEM143-210ENST00000599220 ARHGEF11O15085 1522 aa29.98■■■□□ 2.39
TMEM143-210ENST00000599220 FBLN2P98095 1184 aa29.97■■■□□ 2.39
TMEM143-210ENST00000599220 SOGA1O94964 1423 aa29.96■■■□□ 2.39
TMEM143-210ENST00000599220 CHD1O14646 1710 aa29.94■■■□□ 2.38
TMEM143-210ENST00000599220 TDRD9Q8NDG6 1382 aaKnown RBP29.92■■■□□ 2.38
TMEM143-210ENST00000599220 FGD5Q6ZNL6 1462 aa29.88■■■□□ 2.37
TMEM143-210ENST00000599220 CYB5RLQ6IPT4 315 aa29.85■■■□□ 2.37
TMEM143-210ENST00000599220 CUX1P39880 1505 aa29.85■■■□□ 2.37
TMEM143-210ENST00000599220 SUPT5HO00267 1087 aaKnown RBP29.81■■■□□ 2.36
TMEM143-210ENST00000599220 SNAPC4Q5SXM2 1469 aa29.78■■■□□ 2.36
TMEM143-210ENST00000599220 WDR97A6NE52 1622 aa29.73■■■□□ 2.35
TMEM143-210ENST00000599220 CHMP7Q8WUX9 453 aaPredicted RBP29.71■■■□□ 2.35
TMEM143-210ENST00000599220 ARAP1Q96P48 1450 aa29.69■■■□□ 2.34
TMEM143-210ENST00000599220 GRIN2BQ13224 1484 aa29.68■■■□□ 2.34
TMEM143-210ENST00000599220 MAGI1Q96QZ7 1491 aaPredicted RBP29.66■■■□□ 2.34
TMEM143-210ENST00000599220 CLASP1Q7Z460 1538 aa29.59■■■□□ 2.33
TMEM143-210ENST00000599220 SYNJ1O43426 1573 aa29.58■■■□□ 2.33
TMEM143-210ENST00000599220 GAPVD1Q14C86 1478 aa29.58■■■□□ 2.33
TMEM143-210ENST00000599220 SYNJ2O15056 1496 aa29.57■■■□□ 2.32
TMEM143-210ENST00000599220 TRHP20396 242 aaPredicted RBP29.54■■■□□ 2.32
TMEM143-210ENST00000599220 PBRM1Q86U86 1689 aa29.53■■■□□ 2.32
TMEM143-210ENST00000599220 ABCA10Q8WWZ4 1543 aa29.52■■■□□ 2.32
TMEM143-210ENST00000599220 ABCA5Q8WWZ7 1642 aa29.46■■■□□ 2.31
TMEM143-210ENST00000599220 WRNQ14191 1432 aaPredicted RBP eCLIP29.42■■■□□ 2.3
TMEM143-210ENST00000599220 TOP2BQ02880 1626 aa29.33■■■□□ 2.29
TMEM143-210ENST00000599220 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
TMEM143-210ENST00000599220 GRIN2AQ12879 1464 aa29.29■■■□□ 2.28
TMEM143-210ENST00000599220 ADAMTS12P58397 1594 aa29.26■■■□□ 2.27
TMEM143-210ENST00000599220 FHAD1B1AJZ9 1412 aa29.2■■■□□ 2.26
TMEM143-210ENST00000599220 NUP160Q12769 1436 aa29.19■■■□□ 2.26
TMEM143-210ENST00000599220 CEP170Q5SW79 1584 aa29.18■■■□□ 2.26
TMEM143-210ENST00000599220 ERCC6L2Q5T890 1561 aa29.17■■■□□ 2.26
TMEM143-210ENST00000599220 ERICH3Q5RHP9 1530 aa29.14■■■□□ 2.25
TMEM143-210ENST00000599220 SHROOM2Q13796 1616 aa29.02■■■□□ 2.24
TMEM143-210ENST00000599220 JPH4Q96JJ6 628 aa28.96■■■□□ 2.23
TMEM143-210ENST00000599220 PRG4Q92954 1404 aaPredicted RBP28.94■■■□□ 2.22
TMEM143-210ENST00000599220 RUSC2Q8N2Y8 1516 aa28.83■■■□□ 2.21
TMEM143-210ENST00000599220 IGF1RP08069 1367 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms