RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 NISCHQ9Y2I1 1504 aa57■■■■■ 6.72
CCDC61-207ENST00000599044 CCDC180Q9P1Z9 1646 aa50.95■■■■■ 5.75
CCDC61-207ENST00000599044 ABCC9O60706 1549 aa50.76■■■■■ 5.72
CCDC61-207ENST00000599044 RB1CC1Q8TDY2 1594 aa48.39■■■■■ 5.34
CCDC61-207ENST00000599044 NACADO15069 1562 aa48.08■■■■■ 5.29
CCDC61-207ENST00000599044 DCAF8L2P0C7V8 631 aa48.07■■■■■ 5.29
CCDC61-207ENST00000599044 DNAJC5BQ9UF47 199 aa47.53■■■■■ 5.2
CCDC61-207ENST00000599044 MYO15BQ96JP2 1530 aa47.5■■■■■ 5.19
CCDC61-207ENST00000599044 UNC13AQ9UPW8 1703 aa47.49■■■■■ 5.19
CCDC61-207ENST00000599044 PABPN1Q86U42 306 aaKnown RBP eCLIP47.38■■■■■ 5.18
CCDC61-207ENST00000599044 ZCCHC6Q5VYS8 1495 aaKnown RBP47.29■■■■■ 5.16
CCDC61-207ENST00000599044 DCAF1Q9Y4B6 1507 aa47.03■■■■■ 5.12
CCDC61-207ENST00000599044 BICRAQ9NZM4 1560 aa47.02■■■■■ 5.12
CCDC61-207ENST00000599044 SCRIBQ14160 1630 aa46.51■■■■■ 5.04
CCDC61-207ENST00000599044 SHROOM4Q9ULL8 1493 aa46.39■■■■■ 5.02
CCDC61-207ENST00000599044 CC2D2AQ9P2K1 1620 aa45.93■■■■■ 4.94
CCDC61-207ENST00000599044 EIF4G1Q04637 1599 aaKnown RBP45.83■■■■■ 4.93
CCDC61-207ENST00000599044 CECR2Q9BXF3 1484 aa45.72■■■■■ 4.91
CCDC61-207ENST00000599044 NCAPD3P42695 1498 aa44.44■■■■■ 4.7
CCDC61-207ENST00000599044 ATAD2BQ9ULI0 1458 aa44.38■■■■■ 4.69
CCDC61-207ENST00000599044 SMARCA4P51532 1647 aa44.37■■■■■ 4.69
CCDC61-207ENST00000599044 SMARCA2P51531 1590 aa44.18■■■■■ 4.66
CCDC61-207ENST00000599044 BAZ1AQ9NRL2 1556 aaPredicted RBP44.17■■■■■ 4.66
CCDC61-207ENST00000599044 HMGXB3Q12766 1538 aa44.08■■■■■ 4.65
CCDC61-207ENST00000599044 MROH2BQ7Z745 1585 aa43.98■■■■■ 4.63
CCDC61-207ENST00000599044 BAZ1BQ9UIG0 1483 aaKnown RBP43.92■■■■■ 4.62
CCDC61-207ENST00000599044 PEG3Q9GZU2 1588 aa43.92■■■■■ 4.62
CCDC61-207ENST00000599044 CUX2O14529 1486 aa43.79■■■■■ 4.6
CCDC61-207ENST00000599044 ERCC6Q03468 1493 aa43.78■■■■■ 4.6
CCDC61-207ENST00000599044 NESP48681 1621 aa43.73■■■■■ 4.59
CCDC61-207ENST00000599044 DNAJC5Q9H3Z4 198 aa43.65■■■■■ 4.58
CCDC61-207ENST00000599044 WIZO95785 1651 aa43.44■■■■■ 4.54
CCDC61-207ENST00000599044 LAMC3Q9Y6N6 1575 aa43.38■■■■■ 4.54
CCDC61-207ENST00000599044 THOC2Q8NI27 1593 aaKnown RBP43.3■■■■■ 4.52
CCDC61-207ENST00000599044 KIF21AQ7Z4S6 1674 aa43.2■■■■■ 4.51
CCDC61-207ENST00000599044 RSF1Q96T23 1441 aaPredicted RBP43.18■■■■■ 4.5
CCDC61-207ENST00000599044 CADPSQ9ULU8 1353 aa43.12■■■■■ 4.49
CCDC61-207ENST00000599044 PDS5BQ9NTI5 1447 aa43.09■■■■■ 4.49
CCDC61-207ENST00000599044 TOP2AP11388 1531 aaKnown RBP42.86■■■■■ 4.45
CCDC61-207ENST00000599044 MRC2Q9UBG0 1479 aa42.72■■■■■ 4.43
CCDC61-207ENST00000599044 CFTRP13569 1480 aa42.68■■■■■ 4.42
CCDC61-207ENST00000599044 WDR62O43379 1518 aa42.66■■■■■ 4.42
CCDC61-207ENST00000599044 FANCD2Q9BXW9 1451 aa42.62■■■■■ 4.41
CCDC61-207ENST00000599044 CEP164Q9UPV0 1460 aa42.6■■■■■ 4.41
CCDC61-207ENST00000599044 CCDC88BA6NC98 1476 aa42.45■■■■■ 4.39
CCDC61-207ENST00000599044 PRDM2Q13029 1718 aa42.31■■■■■ 4.36
CCDC61-207ENST00000599044 URB2Q14146 1524 aaKnown RBP42.29■■■■■ 4.36
CCDC61-207ENST00000599044 TOPBP1Q92547 1522 aa41.85■■■■■ 4.29
CCDC61-207ENST00000599044 ZNF608Q9ULD9 1512 aaPredicted RBP41.74■■■■■ 4.27
CCDC61-207ENST00000599044 IFT140Q96RY7 1462 aa41.73■■■■■ 4.27
CCDC61-207ENST00000599044 ABCC8Q09428 1581 aa41.69■■■■■ 4.26
CCDC61-207ENST00000599044 DNMBPQ6XZF7 1577 aa41.68■■■■■ 4.26
CCDC61-207ENST00000599044 TRIM41Q8WV44 630 aa41.65■■■■■ 4.26
CCDC61-207ENST00000599044 OSCARQ8IYS5 282 aa41.64■■■■■ 4.26
CCDC61-207ENST00000599044 SUPT5HO00267 1087 aaKnown RBP41.56■■■■■ 4.24
CCDC61-207ENST00000599044 EIF4G3O43432 1585 aaKnown RBP41.46■■■■■ 4.23
CCDC61-207ENST00000599044 TARBP1Q13395 1621 aaKnown RBP41.46■■■■■ 4.23
CCDC61-207ENST00000599044 POLA1P09884 1462 aaPredicted RBP41.46■■■■■ 4.23
CCDC61-207ENST00000599044 AQRO60306 1485 aaKnown RBP eCLIP41.41■■■■■ 4.222e-6■■■■□ 21.8
CCDC61-207ENST00000599044 RAD54L2Q9Y4B4 1467 aa41.36■■■■■ 4.21
CCDC61-207ENST00000599044 RIMBP3CA6NJZ7 1639 aa41.3■■■■■ 4.2
CCDC61-207ENST00000599044 RIMBP3BA6NNM3 1639 aa41.3■■■■■ 4.2
CCDC61-207ENST00000599044 RIMBP3Q9UFD9 1639 aa41.3■■■■■ 4.2
CCDC61-207ENST00000599044 CUX1P39880 1505 aa41.28■■■■■ 4.2
CCDC61-207ENST00000599044 SOGA1O94964 1423 aa41.28■■■■■ 4.2
CCDC61-207ENST00000599044 FGD5Q6ZNL6 1462 aa41.24■■■■■ 4.19
CCDC61-207ENST00000599044 CHD1O14646 1710 aa41.22■■■■■ 4.19
CCDC61-207ENST00000599044 TDRD9Q8NDG6 1382 aaKnown RBP41.21■■■■■ 4.19
CCDC61-207ENST00000599044 ARHGEF11O15085 1522 aa41.12■■■■■ 4.17
CCDC61-207ENST00000599044 FBLN2P98095 1184 aa41.05■■■■■ 4.16
CCDC61-207ENST00000599044 WDR97A6NE52 1622 aa41■■■■■ 4.15
CCDC61-207ENST00000599044 SNAPC4Q5SXM2 1469 aa40.94■■■■■ 4.14
CCDC61-207ENST00000599044 GRIN2BQ13224 1484 aa40.84■■■■■ 4.13
CCDC61-207ENST00000599044 MAGI1Q96QZ7 1491 aaPredicted RBP40.78■■■■■ 4.12
CCDC61-207ENST00000599044 CHMP7Q8WUX9 453 aaPredicted RBP40.77■■■■■ 4.12
CCDC61-207ENST00000599044 ABCA10Q8WWZ4 1543 aa40.77■■■■■ 4.12
CCDC61-207ENST00000599044 GAPVD1Q14C86 1478 aa40.76■■■■■ 4.12
CCDC61-207ENST00000599044 ARAP1Q96P48 1450 aa40.71■■■■■ 4.11
CCDC61-207ENST00000599044 CYB5RLQ6IPT4 315 aa40.7■■■■■ 4.11
CCDC61-207ENST00000599044 PBRM1Q86U86 1689 aa40.69■■■■■ 4.1
CCDC61-207ENST00000599044 CLASP1Q7Z460 1538 aa40.68■■■■■ 4.1
CCDC61-207ENST00000599044 WRNQ14191 1432 aaPredicted RBP eCLIP40.67■■■■■ 4.1
CCDC61-207ENST00000599044 SYNJ2O15056 1496 aa40.67■■■■■ 4.1
CCDC61-207ENST00000599044 ABCA5Q8WWZ7 1642 aa40.67■■■■■ 4.1
CCDC61-207ENST00000599044 SYNJ1O43426 1573 aa40.66■■■■■ 4.1
CCDC61-207ENST00000599044 TOP2BQ02880 1626 aa40.64■■■■■ 4.1
CCDC61-207ENST00000599044 BIVM-ERCC5R4GMW8 1640 aa40.63■■■■■ 4.09
CCDC61-207ENST00000599044 GRIN2AQ12879 1464 aa40.33■■■■■ 4.05
CCDC61-207ENST00000599044 ADAMTS12P58397 1594 aa40.33■■■■■ 4.05
CCDC61-207ENST00000599044 FHAD1B1AJZ9 1412 aa40.25■■■■■ 4.03
CCDC61-207ENST00000599044 ERICH3Q5RHP9 1530 aa40.23■■■■■ 4.03
CCDC61-207ENST00000599044 CEP170Q5SW79 1584 aa40.2■■■■■ 4.03
CCDC61-207ENST00000599044 NUP160Q12769 1436 aa40.19■■■■■ 4.02
CCDC61-207ENST00000599044 TRHP20396 242 aaPredicted RBP40.15■■■■■ 4.02
CCDC61-207ENST00000599044 ERCC6L2Q5T890 1561 aa40.11■■■■■ 4.01
CCDC61-207ENST00000599044 SHROOM2Q13796 1616 aa39.99■■■■□ 3.99
CCDC61-207ENST00000599044 IGF1RP08069 1367 aa39.9■■■■□ 3.98
CCDC61-207ENST00000599044 KIF27Q86VH2 1401 aa39.86■■■■□ 3.97
CCDC61-207ENST00000599044 JPH4Q96JJ6 628 aa39.83■■■■□ 3.97
CCDC61-207ENST00000599044 PRG4Q92954 1404 aaPredicted RBP39.81■■■■□ 3.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms