RNA–Protein interactions for RNA: ENST00000598972.5

DDX49-207, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-207ENST00000598972 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
DDX49-207ENST00000598972 CCDC180Q9P1Z9 1646 aa32.01■■■□□ 2.72
DDX49-207ENST00000598972 ABCC9O60706 1549 aa31.58■■■□□ 2.65
DDX49-207ENST00000598972 RB1CC1Q8TDY2 1594 aa30.25■■■□□ 2.43
DDX49-207ENST00000598972 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
DDX49-207ENST00000598972 NACADO15069 1562 aa30.16■■■□□ 2.42
DDX49-207ENST00000598972 MYO15BQ96JP2 1530 aa29.88■■■□□ 2.37
DDX49-207ENST00000598972 ZCCHC6Q5VYS8 1495 aaKnown RBP29.86■■■□□ 2.37
DDX49-207ENST00000598972 DCAF1Q9Y4B6 1507 aa29.69■■■□□ 2.34
DDX49-207ENST00000598972 UNC13AQ9UPW8 1703 aa29.59■■■□□ 2.33
DDX49-207ENST00000598972 PABPN1Q86U42 306 aaKnown RBP eCLIP29.52■■■□□ 2.32
DDX49-207ENST00000598972 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
DDX49-207ENST00000598972 DNAJC5BQ9UF47 199 aa29.23■■■□□ 2.27
DDX49-207ENST00000598972 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
DDX49-207ENST00000598972 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
DDX49-207ENST00000598972 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
DDX49-207ENST00000598972 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
DDX49-207ENST00000598972 CECR2Q9BXF3 1484 aa28.39■■■□□ 2.13
DDX49-207ENST00000598972 SMARCA4P51532 1647 aa27.92■■■□□ 2.06
DDX49-207ENST00000598972 BAZ1AQ9NRL2 1556 aaPredicted RBP27.85■■■□□ 2.05
DDX49-207ENST00000598972 NCAPD3P42695 1498 aa27.84■■■□□ 2.05
DDX49-207ENST00000598972 ATAD2BQ9ULI0 1458 aa27.83■■■□□ 2.05
DDX49-207ENST00000598972 SMARCA2P51531 1590 aa27.77■■■□□ 2.04
DDX49-207ENST00000598972 MROH2BQ7Z745 1585 aa27.7■■■□□ 2.03
DDX49-207ENST00000598972 HMGXB3Q12766 1538 aa27.66■■■□□ 2.02
DDX49-207ENST00000598972 PEG3Q9GZU2 1588 aa27.62■■■□□ 2.01
DDX49-207ENST00000598972 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
DDX49-207ENST00000598972 WIZO95785 1651 aa27.4■■□□□ 1.98
DDX49-207ENST00000598972 RSF1Q96T23 1441 aaPredicted RBP27.31■■□□□ 1.96
DDX49-207ENST00000598972 NESP48681 1621 aa27.27■■□□□ 1.96
DDX49-207ENST00000598972 ERCC6Q03468 1493 aa27.23■■□□□ 1.95
DDX49-207ENST00000598972 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.93
DDX49-207ENST00000598972 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
DDX49-207ENST00000598972 CADPSQ9ULU8 1353 aa27.04■■□□□ 1.92
DDX49-207ENST00000598972 CUX2O14529 1486 aa26.99■■□□□ 1.91
DDX49-207ENST00000598972 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
DDX49-207ENST00000598972 KIF21AQ7Z4S6 1674 aa26.93■■□□□ 1.9
DDX49-207ENST00000598972 THOC2Q8NI27 1593 aaKnown RBP26.85■■□□□ 1.89
DDX49-207ENST00000598972 CFTRP13569 1480 aa26.81■■□□□ 1.88
DDX49-207ENST00000598972 CCDC88BA6NC98 1476 aa26.79■■□□□ 1.88
DDX49-207ENST00000598972 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
DDX49-207ENST00000598972 MRC2Q9UBG0 1479 aa26.7■■□□□ 1.87
DDX49-207ENST00000598972 CEP164Q9UPV0 1460 aa26.69■■□□□ 1.86
DDX49-207ENST00000598972 WDR62O43379 1518 aa26.6■■□□□ 1.85
DDX49-207ENST00000598972 PRDM2Q13029 1718 aa26.59■■□□□ 1.85
DDX49-207ENST00000598972 SUPT5HO00267 1087 aaKnown RBP26.54■■□□□ 1.84
DDX49-207ENST00000598972 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
DDX49-207ENST00000598972 URB2Q14146 1524 aaKnown RBP26.46■■□□□ 1.83
DDX49-207ENST00000598972 TOPBP1Q92547 1522 aa26.27■■□□□ 1.8
DDX49-207ENST00000598972 ABCC8Q09428 1581 aa26.26■■□□□ 1.79
DDX49-207ENST00000598972 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.79
DDX49-207ENST00000598972 IFT140Q96RY7 1462 aa26.16■■□□□ 1.78
DDX49-207ENST00000598972 ZNF608Q9ULD9 1512 aaPredicted RBP26.07■■□□□ 1.76
DDX49-207ENST00000598972 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
DDX49-207ENST00000598972 CUX1P39880 1505 aa25.99■■□□□ 1.75
DDX49-207ENST00000598972 TARBP1Q13395 1621 aaKnown RBP25.99■■□□□ 1.75
DDX49-207ENST00000598972 SOGA1O94964 1423 aa25.96■■□□□ 1.75
DDX49-207ENST00000598972 RAD54L2Q9Y4B4 1467 aa25.94■■□□□ 1.74
DDX49-207ENST00000598972 FGD5Q6ZNL6 1462 aa25.93■■□□□ 1.74
DDX49-207ENST00000598972 EIF4G3O43432 1585 aaKnown RBP25.92■■□□□ 1.74
DDX49-207ENST00000598972 OSCARQ8IYS5 282 aa25.92■■□□□ 1.74
DDX49-207ENST00000598972 AQRO60306 1485 aaKnown RBP eCLIP25.91■■□□□ 1.74
DDX49-207ENST00000598972 TDRD9Q8NDG6 1382 aaKnown RBP25.83■■□□□ 1.73
DDX49-207ENST00000598972 WRNQ14191 1432 aaPredicted RBP eCLIP25.75■■□□□ 1.71
DDX49-207ENST00000598972 WDR97A6NE52 1622 aa25.74■■□□□ 1.71
DDX49-207ENST00000598972 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.71
DDX49-207ENST00000598972 TOP2BQ02880 1626 aa25.7■■□□□ 1.7
DDX49-207ENST00000598972 FBLN2P98095 1184 aa25.69■■□□□ 1.7
DDX49-207ENST00000598972 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
DDX49-207ENST00000598972 CHD1O14646 1710 aa25.67■■□□□ 1.7
DDX49-207ENST00000598972 ABCA10Q8WWZ4 1543 aa25.67■■□□□ 1.7
DDX49-207ENST00000598972 GRIN2BQ13224 1484 aa25.65■■□□□ 1.7
DDX49-207ENST00000598972 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
DDX49-207ENST00000598972 SNAPC4Q5SXM2 1469 aa25.63■■□□□ 1.69
DDX49-207ENST00000598972 MAGI1Q96QZ7 1491 aaPredicted RBP25.58■■□□□ 1.69
DDX49-207ENST00000598972 PBRM1Q86U86 1689 aa25.58■■□□□ 1.68
DDX49-207ENST00000598972 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
DDX49-207ENST00000598972 ABCA5Q8WWZ7 1642 aa25.56■■□□□ 1.68
DDX49-207ENST00000598972 TRIM41Q8WV44 630 aa25.54■■□□□ 1.68
DDX49-207ENST00000598972 SYNJ2O15056 1496 aa25.49■■□□□ 1.67
DDX49-207ENST00000598972 RIMBP3CA6NJZ7 1639 aa25.47■■□□□ 1.67
DDX49-207ENST00000598972 RIMBP3BA6NNM3 1639 aa25.47■■□□□ 1.67
DDX49-207ENST00000598972 RIMBP3Q9UFD9 1639 aa25.47■■□□□ 1.67
DDX49-207ENST00000598972 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
DDX49-207ENST00000598972 ERICH3Q5RHP9 1530 aa25.35■■□□□ 1.65
DDX49-207ENST00000598972 CLASP1Q7Z460 1538 aa25.35■■□□□ 1.65
DDX49-207ENST00000598972 ADAMTS12P58397 1594 aa25.34■■□□□ 1.65
DDX49-207ENST00000598972 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
DDX49-207ENST00000598972 GRIN2AQ12879 1464 aa25.3■■□□□ 1.64
DDX49-207ENST00000598972 CYB5RLQ6IPT4 315 aa25.29■■□□□ 1.64
DDX49-207ENST00000598972 KIF27Q86VH2 1401 aa25.23■■□□□ 1.63
DDX49-207ENST00000598972 ARAP1Q96P48 1450 aa25.21■■□□□ 1.63
DDX49-207ENST00000598972 NUP160Q12769 1436 aa25.2■■□□□ 1.62
DDX49-207ENST00000598972 IGF1RP08069 1367 aa25.18■■□□□ 1.62
DDX49-207ENST00000598972 CEP170Q5SW79 1584 aa25.18■■□□□ 1.62
DDX49-207ENST00000598972 CUL7Q14999 1698 aa25.07■■□□□ 1.6
DDX49-207ENST00000598972 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
DDX49-207ENST00000598972 ERCC6L2Q5T890 1561 aa25.02■■□□□ 1.6
DDX49-207ENST00000598972 SHROOM2Q13796 1616 aa25.02■■□□□ 1.6
DDX49-207ENST00000598972 JPH4Q96JJ6 628 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms