RNA–Protein interactions for RNA: ENST00000598775.1

SPTBN4-213, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 3

Gene SPTBN4, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-213ENST00000598775 NISCHQ9Y2I1 1504 aa38.2■■■■□ 3.71
SPTBN4-213ENST00000598775 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.07
SPTBN4-213ENST00000598775 ABCC9O60706 1549 aa33.98■■■■□ 3.03
SPTBN4-213ENST00000598775 RB1CC1Q8TDY2 1594 aa32.51■■■□□ 2.79
SPTBN4-213ENST00000598775 NACADO15069 1562 aa32.36■■■□□ 2.77
SPTBN4-213ENST00000598775 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
SPTBN4-213ENST00000598775 DCAF8L2P0C7V8 631 aa31.99■■■□□ 2.71
SPTBN4-213ENST00000598775 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
SPTBN4-213ENST00000598775 UNC13AQ9UPW8 1703 aa31.74■■■□□ 2.67
SPTBN4-213ENST00000598775 ZCCHC6Q5VYS8 1495 aaKnown RBP31.7■■■□□ 2.66
SPTBN4-213ENST00000598775 DCAF1Q9Y4B6 1507 aa31.66■■■□□ 2.66
SPTBN4-213ENST00000598775 PABPN1Q86U42 306 aaKnown RBP eCLIP31.63■■■□□ 2.65
SPTBN4-213ENST00000598775 BICRAQ9NZM4 1560 aa31.56■■■□□ 2.64
SPTBN4-213ENST00000598775 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
SPTBN4-213ENST00000598775 SCRIBQ14160 1630 aa31.08■■■□□ 2.57
SPTBN4-213ENST00000598775 CC2D2AQ9P2K1 1620 aa30.76■■■□□ 2.52
SPTBN4-213ENST00000598775 EIF4G1Q04637 1599 aaKnown RBP30.76■■■□□ 2.52
SPTBN4-213ENST00000598775 CECR2Q9BXF3 1484 aa30.65■■■□□ 2.5
SPTBN4-213ENST00000598775 NCAPD3P42695 1498 aa29.88■■■□□ 2.37
SPTBN4-213ENST00000598775 ATAD2BQ9ULI0 1458 aa29.76■■■□□ 2.35
SPTBN4-213ENST00000598775 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
SPTBN4-213ENST00000598775 SMARCA2P51531 1590 aa29.7■■■□□ 2.35
SPTBN4-213ENST00000598775 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
SPTBN4-213ENST00000598775 BAZ1AQ9NRL2 1556 aaPredicted RBP29.64■■■□□ 2.34
SPTBN4-213ENST00000598775 PEG3Q9GZU2 1588 aa29.55■■■□□ 2.32
SPTBN4-213ENST00000598775 BAZ1BQ9UIG0 1483 aaKnown RBP29.44■■■□□ 2.3
SPTBN4-213ENST00000598775 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.29
SPTBN4-213ENST00000598775 CUX2O14529 1486 aa29.36■■■□□ 2.29
SPTBN4-213ENST00000598775 ERCC6Q03468 1493 aa29.35■■■□□ 2.29
SPTBN4-213ENST00000598775 NESP48681 1621 aa29.23■■■□□ 2.27
SPTBN4-213ENST00000598775 LAMC3Q9Y6N6 1575 aa29.17■■■□□ 2.26
SPTBN4-213ENST00000598775 DNAJC5Q9H3Z4 198 aa29.16■■■□□ 2.26
SPTBN4-213ENST00000598775 WIZO95785 1651 aa29.02■■■□□ 2.24
SPTBN4-213ENST00000598775 THOC2Q8NI27 1593 aaKnown RBP28.98■■■□□ 2.23
SPTBN4-213ENST00000598775 PDS5BQ9NTI5 1447 aa28.98■■■□□ 2.23
SPTBN4-213ENST00000598775 CADPSQ9ULU8 1353 aa28.94■■■□□ 2.22
SPTBN4-213ENST00000598775 KIF21AQ7Z4S6 1674 aa28.89■■■□□ 2.21
SPTBN4-213ENST00000598775 RSF1Q96T23 1441 aaPredicted RBP28.86■■■□□ 2.21
SPTBN4-213ENST00000598775 TOP2AP11388 1531 aaKnown RBP28.72■■■□□ 2.19
SPTBN4-213ENST00000598775 MRC2Q9UBG0 1479 aa28.69■■■□□ 2.18
SPTBN4-213ENST00000598775 CFTRP13569 1480 aa28.66■■■□□ 2.18
SPTBN4-213ENST00000598775 WDR62O43379 1518 aa28.64■■■□□ 2.18
SPTBN4-213ENST00000598775 CEP164Q9UPV0 1460 aa28.59■■■□□ 2.17
SPTBN4-213ENST00000598775 FANCD2Q9BXW9 1451 aa28.57■■■□□ 2.16
SPTBN4-213ENST00000598775 CCDC88BA6NC98 1476 aa28.37■■■□□ 2.13
SPTBN4-213ENST00000598775 PRDM2Q13029 1718 aa28.37■■■□□ 2.13
SPTBN4-213ENST00000598775 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.13
SPTBN4-213ENST00000598775 ABCC8Q09428 1581 aa28.08■■■□□ 2.09
SPTBN4-213ENST00000598775 TOPBP1Q92547 1522 aa28.06■■■□□ 2.08
SPTBN4-213ENST00000598775 IFT140Q96RY7 1462 aa28.05■■■□□ 2.08
SPTBN4-213ENST00000598775 OSCARQ8IYS5 282 aa27.99■■■□□ 2.07
SPTBN4-213ENST00000598775 DNMBPQ6XZF7 1577 aa27.98■■■□□ 2.07
SPTBN4-213ENST00000598775 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
SPTBN4-213ENST00000598775 TARBP1Q13395 1621 aaKnown RBP27.82■■■□□ 2.04
SPTBN4-213ENST00000598775 EIF4G3O43432 1585 aaKnown RBP27.8■■■□□ 2.04
SPTBN4-213ENST00000598775 POLA1P09884 1462 aaPredicted RBP27.78■■■□□ 2.04
SPTBN4-213ENST00000598775 TRIM41Q8WV44 630 aa27.77■■■□□ 2.04
SPTBN4-213ENST00000598775 AQRO60306 1485 aaKnown RBP eCLIP27.69■■■□□ 2.02
SPTBN4-213ENST00000598775 SOGA1O94964 1423 aa27.65■■■□□ 2.02
SPTBN4-213ENST00000598775 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
SPTBN4-213ENST00000598775 RAD54L2Q9Y4B4 1467 aa27.62■■■□□ 2.01
SPTBN4-213ENST00000598775 CUX1P39880 1505 aa27.61■■■□□ 2.01
SPTBN4-213ENST00000598775 FGD5Q6ZNL6 1462 aa27.6■■■□□ 2.01
SPTBN4-213ENST00000598775 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
SPTBN4-213ENST00000598775 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
SPTBN4-213ENST00000598775 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
SPTBN4-213ENST00000598775 CHD1O14646 1710 aa27.55■■■□□ 2
SPTBN4-213ENST00000598775 ARHGEF11O15085 1522 aa27.52■■■□□ 2
SPTBN4-213ENST00000598775 TDRD9Q8NDG6 1382 aaKnown RBP27.52■■■□□ 2
SPTBN4-213ENST00000598775 SUPT5HO00267 1087 aaKnown RBP27.51■■□□□ 1.99
SPTBN4-213ENST00000598775 MAGI1Q96QZ7 1491 aaPredicted RBP27.43■■□□□ 1.98
SPTBN4-213ENST00000598775 SNAPC4Q5SXM2 1469 aa27.42■■□□□ 1.98
SPTBN4-213ENST00000598775 GRIN2BQ13224 1484 aa27.41■■□□□ 1.98
SPTBN4-213ENST00000598775 FBLN2P98095 1184 aa27.4■■□□□ 1.98
SPTBN4-213ENST00000598775 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
SPTBN4-213ENST00000598775 SYNJ2O15056 1496 aa27.32■■□□□ 1.96
SPTBN4-213ENST00000598775 GAPVD1Q14C86 1478 aa27.32■■□□□ 1.96
SPTBN4-213ENST00000598775 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
SPTBN4-213ENST00000598775 CHMP7Q8WUX9 453 aaPredicted RBP27.3■■□□□ 1.96
SPTBN4-213ENST00000598775 ABCA5Q8WWZ7 1642 aa27.28■■□□□ 1.96
SPTBN4-213ENST00000598775 SYNJ1O43426 1573 aa27.28■■□□□ 1.96
SPTBN4-213ENST00000598775 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
SPTBN4-213ENST00000598775 ARAP1Q96P48 1450 aa27.26■■□□□ 1.95
SPTBN4-213ENST00000598775 CYB5RLQ6IPT4 315 aa27.26■■□□□ 1.95
SPTBN4-213ENST00000598775 WRNQ14191 1432 aaPredicted RBP eCLIP27.25■■□□□ 1.95
SPTBN4-213ENST00000598775 BIVM-ERCC5R4GMW8 1640 aa27.24■■□□□ 1.95
SPTBN4-213ENST00000598775 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
SPTBN4-213ENST00000598775 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
SPTBN4-213ENST00000598775 ADAMTS12P58397 1594 aa27.05■■□□□ 1.92
SPTBN4-213ENST00000598775 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
SPTBN4-213ENST00000598775 FHAD1B1AJZ9 1412 aa27■■□□□ 1.91
SPTBN4-213ENST00000598775 NUP160Q12769 1436 aa26.99■■□□□ 1.91
SPTBN4-213ENST00000598775 CEP170Q5SW79 1584 aa26.92■■□□□ 1.9
SPTBN4-213ENST00000598775 TRHP20396 242 aaPredicted RBP26.86■■□□□ 1.89
SPTBN4-213ENST00000598775 SHROOM2Q13796 1616 aa26.86■■□□□ 1.89
SPTBN4-213ENST00000598775 ERCC6L2Q5T890 1561 aa26.81■■□□□ 1.88
SPTBN4-213ENST00000598775 KIF27Q86VH2 1401 aa26.69■■□□□ 1.86
SPTBN4-213ENST00000598775 JPH4Q96JJ6 628 aa26.68■■□□□ 1.86
SPTBN4-213ENST00000598775 IGF1RP08069 1367 aa26.68■■□□□ 1.86
SPTBN4-213ENST00000598775 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms