RNA–Protein interactions for RNA: ENST00000598684.5

CAPN12-210, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-210ENST00000598684 NISCHQ9Y2I1 1504 aa40.98■■■■■ 4.15
CAPN12-210ENST00000598684 ABCC9O60706 1549 aa37.58■■■■□ 3.61
CAPN12-210ENST00000598684 CCDC180Q9P1Z9 1646 aa36.96■■■■□ 3.51
CAPN12-210ENST00000598684 DNAJC5BQ9UF47 199 aa35.71■■■■□ 3.31
CAPN12-210ENST00000598684 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
CAPN12-210ENST00000598684 NACADO15069 1562 aa35.08■■■■□ 3.21
CAPN12-210ENST00000598684 DCAF8L2P0C7V8 631 aa34.91■■■■□ 3.18
CAPN12-210ENST00000598684 PABPN1Q86U42 306 aaKnown RBP eCLIP34.91■■■■□ 3.18
CAPN12-210ENST00000598684 UNC13AQ9UPW8 1703 aa34.64■■■■□ 3.14
CAPN12-210ENST00000598684 BICRAQ9NZM4 1560 aa34.46■■■■□ 3.11
CAPN12-210ENST00000598684 MYO15BQ96JP2 1530 aa34.39■■■■□ 3.1
CAPN12-210ENST00000598684 SHROOM4Q9ULL8 1493 aa33.9■■■■□ 3.02
CAPN12-210ENST00000598684 CECR2Q9BXF3 1484 aa33.88■■■■□ 3.01
CAPN12-210ENST00000598684 CC2D2AQ9P2K1 1620 aa33.87■■■■□ 3.01
CAPN12-210ENST00000598684 ZCCHC6Q5VYS8 1495 aaKnown RBP33.84■■■■□ 3.01
CAPN12-210ENST00000598684 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
CAPN12-210ENST00000598684 SCRIBQ14160 1630 aa33.72■■■□□ 2.99
CAPN12-210ENST00000598684 EIF4G1Q04637 1599 aaKnown RBP33.67■■■□□ 2.98
CAPN12-210ENST00000598684 DNAJC5Q9H3Z4 198 aa33.16■■■□□ 2.9
CAPN12-210ENST00000598684 CUX2O14529 1486 aa32.54■■■□□ 2.8
CAPN12-210ENST00000598684 ERCC6Q03468 1493 aa32.48■■■□□ 2.79
CAPN12-210ENST00000598684 NCAPD3P42695 1498 aa32.41■■■□□ 2.78
CAPN12-210ENST00000598684 ATAD2BQ9ULI0 1458 aa32.25■■■□□ 2.75
CAPN12-210ENST00000598684 NESP48681 1621 aa32.11■■■□□ 2.73
CAPN12-210ENST00000598684 SMARCA2P51531 1590 aa32.11■■■□□ 2.73
CAPN12-210ENST00000598684 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
CAPN12-210ENST00000598684 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
CAPN12-210ENST00000598684 BAZ1BQ9UIG0 1483 aaKnown RBP31.92■■■□□ 2.7
CAPN12-210ENST00000598684 THOC2Q8NI27 1593 aaKnown RBP31.86■■■□□ 2.69
CAPN12-210ENST00000598684 BAZ1AQ9NRL2 1556 aaPredicted RBP31.84■■■□□ 2.69
CAPN12-210ENST00000598684 LAMC3Q9Y6N6 1575 aa31.76■■■□□ 2.67
CAPN12-210ENST00000598684 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
CAPN12-210ENST00000598684 KIF21AQ7Z4S6 1674 aa31.64■■■□□ 2.66
CAPN12-210ENST00000598684 PDS5BQ9NTI5 1447 aa31.62■■■□□ 2.65
CAPN12-210ENST00000598684 MROH2BQ7Z745 1585 aa31.59■■■□□ 2.65
CAPN12-210ENST00000598684 TRIM41Q8WV44 630 aa31.56■■■□□ 2.64
CAPN12-210ENST00000598684 CADPSQ9ULU8 1353 aa31.41■■■□□ 2.62
CAPN12-210ENST00000598684 MRC2Q9UBG0 1479 aa31.39■■■□□ 2.62
CAPN12-210ENST00000598684 WDR62O43379 1518 aa31.3■■■□□ 2.6
CAPN12-210ENST00000598684 WIZO95785 1651 aa31.18■■■□□ 2.58
CAPN12-210ENST00000598684 CEP164Q9UPV0 1460 aa31.16■■■□□ 2.58
CAPN12-210ENST00000598684 FANCD2Q9BXW9 1451 aa31.08■■■□□ 2.57
CAPN12-210ENST00000598684 OSCARQ8IYS5 282 aa31■■■□□ 2.55
CAPN12-210ENST00000598684 CFTRP13569 1480 aa30.94■■■□□ 2.54
CAPN12-210ENST00000598684 URB2Q14146 1524 aaKnown RBP30.85■■■□□ 2.53
CAPN12-210ENST00000598684 TOP2AP11388 1531 aaKnown RBP30.74■■■□□ 2.51
CAPN12-210ENST00000598684 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
CAPN12-210ENST00000598684 RIMBP3CA6NJZ7 1639 aa30.65■■■□□ 2.5
CAPN12-210ENST00000598684 RIMBP3BA6NNM3 1639 aa30.65■■■□□ 2.5
CAPN12-210ENST00000598684 RIMBP3Q9UFD9 1639 aa30.65■■■□□ 2.5
CAPN12-210ENST00000598684 ZNF608Q9ULD9 1512 aaPredicted RBP30.57■■■□□ 2.49
CAPN12-210ENST00000598684 IFT140Q96RY7 1462 aa30.54■■■□□ 2.48
CAPN12-210ENST00000598684 PRDM2Q13029 1718 aa30.53■■■□□ 2.48
CAPN12-210ENST00000598684 ARHGEF11O15085 1522 aa30.51■■■□□ 2.47
CAPN12-210ENST00000598684 TOPBP1Q92547 1522 aa30.42■■■□□ 2.46
CAPN12-210ENST00000598684 CCDC88BA6NC98 1476 aa30.41■■■□□ 2.46
CAPN12-210ENST00000598684 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
CAPN12-210ENST00000598684 CYB5RLQ6IPT4 315 aa30.35■■■□□ 2.45
CAPN12-210ENST00000598684 ABCC8Q09428 1581 aa30.29■■■□□ 2.44
CAPN12-210ENST00000598684 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
CAPN12-210ENST00000598684 AQRO60306 1485 aaKnown RBP eCLIP30.23■■■□□ 2.43
CAPN12-210ENST00000598684 CHD1O14646 1710 aa30.22■■■□□ 2.43
CAPN12-210ENST00000598684 TRHP20396 242 aaPredicted RBP30.21■■■□□ 2.43
CAPN12-210ENST00000598684 FBLN2P98095 1184 aa30.18■■■□□ 2.42
CAPN12-210ENST00000598684 ARAP1Q96P48 1450 aa30.18■■■□□ 2.42
CAPN12-210ENST00000598684 TARBP1Q13395 1621 aaKnown RBP30.17■■■□□ 2.42
CAPN12-210ENST00000598684 POLA1P09884 1462 aaPredicted RBP30.07■■■□□ 2.4
CAPN12-210ENST00000598684 RAD54L2Q9Y4B4 1467 aa30■■■□□ 2.39
CAPN12-210ENST00000598684 TDRD9Q8NDG6 1382 aaKnown RBP29.97■■■□□ 2.39
CAPN12-210ENST00000598684 SOGA1O94964 1423 aa29.94■■■□□ 2.38
CAPN12-210ENST00000598684 SNAPC4Q5SXM2 1469 aa29.91■■■□□ 2.38
CAPN12-210ENST00000598684 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
CAPN12-210ENST00000598684 CHMP7Q8WUX9 453 aaPredicted RBP29.84■■■□□ 2.37
CAPN12-210ENST00000598684 FGD5Q6ZNL6 1462 aa29.82■■■□□ 2.36
CAPN12-210ENST00000598684 SYNJ1O43426 1573 aa29.81■■■□□ 2.36
CAPN12-210ENST00000598684 WDR97A6NE52 1622 aa29.79■■■□□ 2.36
CAPN12-210ENST00000598684 MAGI1Q96QZ7 1491 aaPredicted RBP29.77■■■□□ 2.36
CAPN12-210ENST00000598684 GRIN2BQ13224 1484 aa29.74■■■□□ 2.35
CAPN12-210ENST00000598684 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
CAPN12-210ENST00000598684 CUX1P39880 1505 aa29.71■■■□□ 2.35
CAPN12-210ENST00000598684 SYNJ2O15056 1496 aa29.69■■■□□ 2.34
CAPN12-210ENST00000598684 GAPVD1Q14C86 1478 aa29.61■■■□□ 2.33
CAPN12-210ENST00000598684 PBRM1Q86U86 1689 aa29.56■■■□□ 2.32
CAPN12-210ENST00000598684 ABCA5Q8WWZ7 1642 aa29.43■■■□□ 2.3
CAPN12-210ENST00000598684 ABCA10Q8WWZ4 1543 aa29.43■■■□□ 2.3
CAPN12-210ENST00000598684 ERCC6L2Q5T890 1561 aa29.39■■■□□ 2.3
CAPN12-210ENST00000598684 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
CAPN12-210ENST00000598684 CEP170Q5SW79 1584 aa29.28■■■□□ 2.28
CAPN12-210ENST00000598684 ADAMTS12P58397 1594 aa29.26■■■□□ 2.28
CAPN12-210ENST00000598684 NUP160Q12769 1436 aa29.26■■■□□ 2.27
CAPN12-210ENST00000598684 WRNQ14191 1432 aaPredicted RBP eCLIP29.22■■■□□ 2.27
CAPN12-210ENST00000598684 SHROOM2Q13796 1616 aa29.17■■■□□ 2.26
CAPN12-210ENST00000598684 FHAD1B1AJZ9 1412 aa29.16■■■□□ 2.26
CAPN12-210ENST00000598684 KIF13AQ9H1H9 1805 aa29.06■■■□□ 2.24
CAPN12-210ENST00000598684 TOP2BQ02880 1626 aa29.06■■■□□ 2.24
CAPN12-210ENST00000598684 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
CAPN12-210ENST00000598684 PRG4Q92954 1404 aaPredicted RBP29.05■■■□□ 2.24
CAPN12-210ENST00000598684 SUPT5HO00267 1087 aaKnown RBP29.05■■■□□ 2.24
CAPN12-210ENST00000598684 ERICH3Q5RHP9 1530 aa29.04■■■□□ 2.24
CAPN12-210ENST00000598684 JPH4Q96JJ6 628 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms