RNA–Protein interactions for RNA: ENST00000598605.1

SAMD4B-207, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 2

Gene SAMD4B, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-207ENST00000598605 NISCHQ9Y2I1 1504 aa38.38■■■■□ 3.74
SAMD4B-207ENST00000598605 CCDC180Q9P1Z9 1646 aa33.89■■■■□ 3.02
SAMD4B-207ENST00000598605 ABCC9O60706 1549 aa32.46■■■□□ 2.79
SAMD4B-207ENST00000598605 ZCCHC6Q5VYS8 1495 aaKnown RBP32.13■■■□□ 2.73
SAMD4B-207ENST00000598605 DCAF8L2P0C7V8 631 aa31.83■■■□□ 2.69
SAMD4B-207ENST00000598605 DCAF1Q9Y4B6 1507 aa31.78■■■□□ 2.68
SAMD4B-207ENST00000598605 NACADO15069 1562 aa31.66■■■□□ 2.66
SAMD4B-207ENST00000598605 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
SAMD4B-207ENST00000598605 RB1CC1Q8TDY2 1594 aa31.56■■■□□ 2.64
SAMD4B-207ENST00000598605 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
SAMD4B-207ENST00000598605 UNC13AQ9UPW8 1703 aa30.86■■■□□ 2.53
SAMD4B-207ENST00000598605 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
SAMD4B-207ENST00000598605 BICRAQ9NZM4 1560 aa30.52■■■□□ 2.48
SAMD4B-207ENST00000598605 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.46
SAMD4B-207ENST00000598605 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
SAMD4B-207ENST00000598605 BAZ1AQ9NRL2 1556 aaPredicted RBP29.73■■■□□ 2.35
SAMD4B-207ENST00000598605 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
SAMD4B-207ENST00000598605 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
SAMD4B-207ENST00000598605 MROH2BQ7Z745 1585 aa29.6■■■□□ 2.33
SAMD4B-207ENST00000598605 RSF1Q96T23 1441 aaPredicted RBP29.48■■■□□ 2.31
SAMD4B-207ENST00000598605 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
SAMD4B-207ENST00000598605 WIZO95785 1651 aa29.35■■■□□ 2.29
SAMD4B-207ENST00000598605 SMARCA2P51531 1590 aa29.34■■■□□ 2.29
SAMD4B-207ENST00000598605 PEG3Q9GZU2 1588 aa29.33■■■□□ 2.29
SAMD4B-207ENST00000598605 SUPT5HO00267 1087 aaKnown RBP29.31■■■□□ 2.28
SAMD4B-207ENST00000598605 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
SAMD4B-207ENST00000598605 NCAPD3P42695 1498 aa29.15■■■□□ 2.26
SAMD4B-207ENST00000598605 BAZ1BQ9UIG0 1483 aaKnown RBP29.14■■■□□ 2.26
SAMD4B-207ENST00000598605 HMGXB3Q12766 1538 aa29.13■■■□□ 2.25
SAMD4B-207ENST00000598605 TOP2AP11388 1531 aaKnown RBP29.08■■■□□ 2.25
SAMD4B-207ENST00000598605 DNAJC5BQ9UF47 199 aa29.06■■■□□ 2.24
SAMD4B-207ENST00000598605 CCDC88BA6NC98 1476 aa28.69■■■□□ 2.18
SAMD4B-207ENST00000598605 CADPSQ9ULU8 1353 aa28.36■■■□□ 2.13
SAMD4B-207ENST00000598605 LAMC3Q9Y6N6 1575 aa28.34■■■□□ 2.13
SAMD4B-207ENST00000598605 CFTRP13569 1480 aa28.33■■■□□ 2.13
SAMD4B-207ENST00000598605 PRDM2Q13029 1718 aa28.29■■■□□ 2.12
SAMD4B-207ENST00000598605 NESP48681 1621 aa28.28■■■□□ 2.12
SAMD4B-207ENST00000598605 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
SAMD4B-207ENST00000598605 FANCD2Q9BXW9 1451 aa28.06■■■□□ 2.08
SAMD4B-207ENST00000598605 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
SAMD4B-207ENST00000598605 CEP164Q9UPV0 1460 aa28■■■□□ 2.07
SAMD4B-207ENST00000598605 ERCC6Q03468 1493 aa27.97■■■□□ 2.07
SAMD4B-207ENST00000598605 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
SAMD4B-207ENST00000598605 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.04
SAMD4B-207ENST00000598605 MRC2Q9UBG0 1479 aa27.8■■■□□ 2.04
SAMD4B-207ENST00000598605 DNMBPQ6XZF7 1577 aa27.74■■■□□ 2.03
SAMD4B-207ENST00000598605 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
SAMD4B-207ENST00000598605 CUX1P39880 1505 aa27.73■■■□□ 2.03
SAMD4B-207ENST00000598605 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
SAMD4B-207ENST00000598605 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
SAMD4B-207ENST00000598605 BIVM-ERCC5R4GMW8 1640 aa27.71■■■□□ 2.03
SAMD4B-207ENST00000598605 CHIC1Q5VXU3 224 aa27.7■■■□□ 2.02
SAMD4B-207ENST00000598605 TOP2BQ02880 1626 aa27.7■■■□□ 2.02
SAMD4B-207ENST00000598605 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
SAMD4B-207ENST00000598605 WDR62O43379 1518 aa27.67■■■□□ 2.02
SAMD4B-207ENST00000598605 TRIM41Q8WV44 630 aa27.65■■■□□ 2.02
SAMD4B-207ENST00000598605 FGD5Q6ZNL6 1462 aa27.55■■■□□ 2
SAMD4B-207ENST00000598605 POLA1P09884 1462 aaPredicted RBP27.5■■□□□ 1.99
SAMD4B-207ENST00000598605 SOGA1O94964 1423 aa27.4■■□□□ 1.98
SAMD4B-207ENST00000598605 CUX2O14529 1486 aa27.38■■□□□ 1.97
SAMD4B-207ENST00000598605 RAD54L2Q9Y4B4 1467 aa27.36■■□□□ 1.97
SAMD4B-207ENST00000598605 IFT140Q96RY7 1462 aa27.35■■□□□ 1.97
SAMD4B-207ENST00000598605 TARBP1Q13395 1621 aaKnown RBP27.33■■□□□ 1.97
SAMD4B-207ENST00000598605 WDR97A6NE52 1622 aa27.31■■□□□ 1.96
SAMD4B-207ENST00000598605 ABCA10Q8WWZ4 1543 aa27.29■■□□□ 1.96
SAMD4B-207ENST00000598605 KIF27Q86VH2 1401 aa27.19■■□□□ 1.94
SAMD4B-207ENST00000598605 ABCA5Q8WWZ7 1642 aa27.15■■□□□ 1.94
SAMD4B-207ENST00000598605 EEA1Q15075 1411 aa27.15■■□□□ 1.94
SAMD4B-207ENST00000598605 TDRD9Q8NDG6 1382 aaKnown RBP27.14■■□□□ 1.94
SAMD4B-207ENST00000598605 ZNF608Q9ULD9 1512 aaPredicted RBP27.14■■□□□ 1.94
SAMD4B-207ENST00000598605 EIF4G3O43432 1585 aaKnown RBP27.14■■□□□ 1.93
SAMD4B-207ENST00000598605 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
SAMD4B-207ENST00000598605 GAPVD1Q14C86 1478 aa27.11■■□□□ 1.93
SAMD4B-207ENST00000598605 AQRO60306 1485 aaKnown RBP eCLIP27.08■■□□□ 1.933e-7■■■□□ 16.3
SAMD4B-207ENST00000598605 FAM9AQ8IZU1 332 aaPredicted RBP27.07■■□□□ 1.92
SAMD4B-207ENST00000598605 PBRM1Q86U86 1689 aa27.07■■□□□ 1.92
SAMD4B-207ENST00000598605 GRIN2BQ13224 1484 aa27■■□□□ 1.91
SAMD4B-207ENST00000598605 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
SAMD4B-207ENST00000598605 CSRNP3Q8WYN3 585 aa26.96■■□□□ 1.91
SAMD4B-207ENST00000598605 CUL7Q14999 1698 aa26.94■■□□□ 1.9
SAMD4B-207ENST00000598605 IGF1RP08069 1367 aa26.93■■□□□ 1.9
SAMD4B-207ENST00000598605 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
SAMD4B-207ENST00000598605 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
SAMD4B-207ENST00000598605 ADAMTS12P58397 1594 aa26.86■■□□□ 1.89
SAMD4B-207ENST00000598605 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
SAMD4B-207ENST00000598605 KIF21BO75037 1637 aa26.82■■□□□ 1.88
SAMD4B-207ENST00000598605 FHAD1B1AJZ9 1412 aa26.81■■□□□ 1.88
SAMD4B-207ENST00000598605 PRXQ9BXM0 1461 aa26.8■■□□□ 1.88
SAMD4B-207ENST00000598605 RAPGEF2Q9Y4G8 1499 aa26.77■■□□□ 1.88
SAMD4B-207ENST00000598605 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
SAMD4B-207ENST00000598605 GOLGA3Q08378 1498 aa26.73■■□□□ 1.87
SAMD4B-207ENST00000598605 EHMT2Q96KQ7 1210 aa26.69■■□□□ 1.86
SAMD4B-207ENST00000598605 CHD1O14646 1710 aa26.68■■□□□ 1.86
SAMD4B-207ENST00000598605 CHMP7Q8WUX9 453 aaPredicted RBP26.68■■□□□ 1.86
SAMD4B-207ENST00000598605 FBLN2P98095 1184 aa26.67■■□□□ 1.86
SAMD4B-207ENST00000598605 GRIN2AQ12879 1464 aa26.66■■□□□ 1.86
SAMD4B-207ENST00000598605 UBTFP17480 764 aaKnown RBP26.58■■□□□ 1.85
SAMD4B-207ENST00000598605 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
SAMD4B-207ENST00000598605 CTTNBP2Q8WZ74 1663 aa26.55■■□□□ 1.84
SAMD4B-207ENST00000598605 CEP170Q5SW79 1584 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms