RNA–Protein interactions for RNA: ENST00000598493.5

GTPBP3-217, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 5

Gene GTPBP3, Length 808 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-217ENST00000598493 NISCHQ9Y2I1 1504 aa51.14■■■■■ 5.78
GTPBP3-217ENST00000598493 ABCC9O60706 1549 aa46.12■■■■■ 4.97
GTPBP3-217ENST00000598493 CCDC180Q9P1Z9 1646 aa45.77■■■■■ 4.92
GTPBP3-217ENST00000598493 RB1CC1Q8TDY2 1594 aa43.72■■■■■ 4.59
GTPBP3-217ENST00000598493 DNAJC5BQ9UF47 199 aa43.62■■■■■ 4.57
GTPBP3-217ENST00000598493 NACADO15069 1562 aa43.34■■■■■ 4.53
GTPBP3-217ENST00000598493 DCAF8L2P0C7V8 631 aa43.34■■■■■ 4.53
GTPBP3-217ENST00000598493 PABPN1Q86U42 306 aaKnown RBP eCLIP42.88■■■■■ 4.45
GTPBP3-217ENST00000598493 UNC13AQ9UPW8 1703 aa42.79■■■■■ 4.44
GTPBP3-217ENST00000598493 MYO15BQ96JP2 1530 aa42.65■■■■■ 4.42
GTPBP3-217ENST00000598493 BICRAQ9NZM4 1560 aa42.53■■■■■ 4.4
GTPBP3-217ENST00000598493 ZCCHC6Q5VYS8 1495 aaKnown RBP42.46■■■■■ 4.39
GTPBP3-217ENST00000598493 DCAF1Q9Y4B6 1507 aa42.14■■■■■ 4.34
GTPBP3-217ENST00000598493 SHROOM4Q9ULL8 1493 aa41.85■■■■■ 4.29
GTPBP3-217ENST00000598493 SCRIBQ14160 1630 aa41.84■■■■■ 4.29
GTPBP3-217ENST00000598493 CC2D2AQ9P2K1 1620 aa41.65■■■■■ 4.26
GTPBP3-217ENST00000598493 CECR2Q9BXF3 1484 aa41.57■■■■■ 4.25
GTPBP3-217ENST00000598493 EIF4G1Q04637 1599 aaKnown RBP41.47■■■■■ 4.23
GTPBP3-217ENST00000598493 DNAJC5Q9H3Z4 198 aa40.23■■■■■ 4.03
GTPBP3-217ENST00000598493 NCAPD3P42695 1498 aa40.03■■■■■ 4
GTPBP3-217ENST00000598493 ATAD2BQ9ULI0 1458 aa39.88■■■■□ 3.97
GTPBP3-217ENST00000598493 CUX2O14529 1486 aa39.87■■■■□ 3.97
GTPBP3-217ENST00000598493 SMARCA4P51532 1647 aa39.83■■■■□ 3.97
GTPBP3-217ENST00000598493 ERCC6Q03468 1493 aa39.8■■■■□ 3.96
GTPBP3-217ENST00000598493 SMARCA2P51531 1590 aa39.71■■■■□ 3.95
GTPBP3-217ENST00000598493 HMGXB3Q12766 1538 aa39.7■■■■□ 3.95
GTPBP3-217ENST00000598493 BAZ1AQ9NRL2 1556 aaPredicted RBP39.67■■■■□ 3.94
GTPBP3-217ENST00000598493 NESP48681 1621 aa39.55■■■■□ 3.92
GTPBP3-217ENST00000598493 MROH2BQ7Z745 1585 aa39.47■■■■□ 3.91
GTPBP3-217ENST00000598493 BAZ1BQ9UIG0 1483 aaKnown RBP39.47■■■■□ 3.91
GTPBP3-217ENST00000598493 PEG3Q9GZU2 1588 aa39.37■■■■□ 3.89
GTPBP3-217ENST00000598493 THOC2Q8NI27 1593 aaKnown RBP39.21■■■■□ 3.87
GTPBP3-217ENST00000598493 LAMC3Q9Y6N6 1575 aa39.17■■■■□ 3.86
GTPBP3-217ENST00000598493 WIZO95785 1651 aa39.05■■■■□ 3.84
GTPBP3-217ENST00000598493 KIF21AQ7Z4S6 1674 aa39.01■■■■□ 3.84
GTPBP3-217ENST00000598493 PDS5BQ9NTI5 1447 aa38.93■■■■□ 3.82
GTPBP3-217ENST00000598493 CADPSQ9ULU8 1353 aa38.79■■■■□ 3.8
GTPBP3-217ENST00000598493 RSF1Q96T23 1441 aaPredicted RBP38.78■■■■□ 3.8
GTPBP3-217ENST00000598493 MRC2Q9UBG0 1479 aa38.65■■■■□ 3.78
GTPBP3-217ENST00000598493 WDR62O43379 1518 aa38.58■■■■□ 3.77
GTPBP3-217ENST00000598493 TOP2AP11388 1531 aaKnown RBP38.53■■■■□ 3.76
GTPBP3-217ENST00000598493 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
GTPBP3-217ENST00000598493 FANCD2Q9BXW9 1451 aa38.35■■■■□ 3.73
GTPBP3-217ENST00000598493 TRIM41Q8WV44 630 aa38.3■■■■□ 3.72
GTPBP3-217ENST00000598493 CFTRP13569 1480 aa38.28■■■■□ 3.72
GTPBP3-217ENST00000598493 CCDC88BA6NC98 1476 aa38.12■■■■□ 3.69
GTPBP3-217ENST00000598493 URB2Q14146 1524 aaKnown RBP38.1■■■■□ 3.69
GTPBP3-217ENST00000598493 OSCARQ8IYS5 282 aa37.95■■■■□ 3.67
GTPBP3-217ENST00000598493 PRDM2Q13029 1718 aa37.9■■■■□ 3.66
GTPBP3-217ENST00000598493 ZNF608Q9ULD9 1512 aaPredicted RBP37.68■■■■□ 3.62
GTPBP3-217ENST00000598493 IFT140Q96RY7 1462 aa37.66■■■■□ 3.62
GTPBP3-217ENST00000598493 SUPT5HO00267 1087 aaKnown RBP37.64■■■■□ 3.62
GTPBP3-217ENST00000598493 TOPBP1Q92547 1522 aa37.61■■■■□ 3.61
GTPBP3-217ENST00000598493 RIMBP3CA6NJZ7 1639 aa37.57■■■■□ 3.6
GTPBP3-217ENST00000598493 RIMBP3BA6NNM3 1639 aa37.57■■■■□ 3.6
GTPBP3-217ENST00000598493 RIMBP3Q9UFD9 1639 aa37.57■■■■□ 3.6
GTPBP3-217ENST00000598493 EIF4G3O43432 1585 aaKnown RBP37.44■■■■□ 3.58
GTPBP3-217ENST00000598493 ABCC8Q09428 1581 aa37.44■■■■□ 3.58
GTPBP3-217ENST00000598493 DNMBPQ6XZF7 1577 aa37.43■■■■□ 3.58
GTPBP3-217ENST00000598493 ARHGEF11O15085 1522 aa37.4■■■■□ 3.58
GTPBP3-217ENST00000598493 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.56
GTPBP3-217ENST00000598493 AQRO60306 1485 aaKnown RBP eCLIP37.28■■■■□ 3.569e-8■■■■■ 31.6
GTPBP3-217ENST00000598493 CHD1O14646 1710 aa37.23■■■■□ 3.55
GTPBP3-217ENST00000598493 POLA1P09884 1462 aaPredicted RBP37.2■■■■□ 3.55
GTPBP3-217ENST00000598493 RAD54L2Q9Y4B4 1467 aa37.13■■■■□ 3.53
GTPBP3-217ENST00000598493 CYB5RLQ6IPT4 315 aa37.11■■■■□ 3.53
GTPBP3-217ENST00000598493 SOGA1O94964 1423 aa37.08■■■■□ 3.53
GTPBP3-217ENST00000598493 CUX1P39880 1505 aa37.06■■■■□ 3.52
GTPBP3-217ENST00000598493 FGD5Q6ZNL6 1462 aa37.06■■■■□ 3.52
GTPBP3-217ENST00000598493 FBLN2P98095 1184 aa37.04■■■■□ 3.52
GTPBP3-217ENST00000598493 ARAP1Q96P48 1450 aa37.03■■■■□ 3.52
GTPBP3-217ENST00000598493 TDRD9Q8NDG6 1382 aaKnown RBP37■■■■□ 3.51
GTPBP3-217ENST00000598493 SNAPC4Q5SXM2 1469 aa36.89■■■■□ 3.5
GTPBP3-217ENST00000598493 WDR97A6NE52 1622 aa36.86■■■■□ 3.49
GTPBP3-217ENST00000598493 CLASP1Q7Z460 1538 aa36.81■■■■□ 3.48
GTPBP3-217ENST00000598493 TRHP20396 242 aaPredicted RBP36.77■■■■□ 3.48
GTPBP3-217ENST00000598493 MAGI1Q96QZ7 1491 aaPredicted RBP36.75■■■■□ 3.47
GTPBP3-217ENST00000598493 GRIN2BQ13224 1484 aa36.72■■■■□ 3.47
GTPBP3-217ENST00000598493 SYNJ1O43426 1573 aa36.71■■■■□ 3.47
GTPBP3-217ENST00000598493 CHMP7Q8WUX9 453 aaPredicted RBP36.71■■■■□ 3.47
GTPBP3-217ENST00000598493 SYNJ2O15056 1496 aa36.64■■■■□ 3.46
GTPBP3-217ENST00000598493 WRNQ14191 1432 aaPredicted RBP eCLIP36.62■■■■□ 3.45
GTPBP3-217ENST00000598493 GAPVD1Q14C86 1478 aa36.62■■■■□ 3.45
GTPBP3-217ENST00000598493 ABCA10Q8WWZ4 1543 aa36.58■■■■□ 3.45
GTPBP3-217ENST00000598493 PBRM1Q86U86 1689 aa36.58■■■■□ 3.45
GTPBP3-217ENST00000598493 TOP2BQ02880 1626 aa36.53■■■■□ 3.44
GTPBP3-217ENST00000598493 BIVM-ERCC5R4GMW8 1640 aa36.52■■■■□ 3.44
GTPBP3-217ENST00000598493 ABCA5Q8WWZ7 1642 aa36.49■■■■□ 3.43
GTPBP3-217ENST00000598493 GRIN2AQ12879 1464 aa36.26■■■■□ 3.4
GTPBP3-217ENST00000598493 ERCC6L2Q5T890 1561 aa36.25■■■■□ 3.39
GTPBP3-217ENST00000598493 ADAMTS12P58397 1594 aa36.23■■■■□ 3.39
GTPBP3-217ENST00000598493 CEP170Q5SW79 1584 aa36.19■■■■□ 3.38
GTPBP3-217ENST00000598493 NUP160Q12769 1436 aa36.17■■■■□ 3.38
GTPBP3-217ENST00000598493 FHAD1B1AJZ9 1412 aa36.14■■■■□ 3.38
GTPBP3-217ENST00000598493 ERICH3Q5RHP9 1530 aa36.12■■■■□ 3.37
GTPBP3-217ENST00000598493 SHROOM2Q13796 1616 aa36.06■■■■□ 3.36
GTPBP3-217ENST00000598493 AEBP2Q6ZN18 517 aaPredicted RBP35.91■■■■□ 3.34
GTPBP3-217ENST00000598493 KIF27Q86VH2 1401 aa35.9■■■■□ 3.34
GTPBP3-217ENST00000598493 PRG4Q92954 1404 aaPredicted RBP35.83■■■■□ 3.33
GTPBP3-217ENST00000598493 IGF1RP08069 1367 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms