RNA–Protein interactions for RNA: ENST00000598430.1

RAB4B-205, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB4B, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-205ENST00000598430 NISCHQ9Y2I1 1504 aa40.14■■■■■ 4.02
RAB4B-205ENST00000598430 CCDC180Q9P1Z9 1646 aa35.18■■■■□ 3.22
RAB4B-205ENST00000598430 ZCCHC6Q5VYS8 1495 aaKnown RBP33.68■■■□□ 2.98
RAB4B-205ENST00000598430 ABCC9O60706 1549 aa33.64■■■□□ 2.98
RAB4B-205ENST00000598430 DCAF1Q9Y4B6 1507 aa33.23■■■□□ 2.91
RAB4B-205ENST00000598430 DCAF8L2P0C7V8 631 aa33.19■■■□□ 2.9
RAB4B-205ENST00000598430 MYO15BQ96JP2 1530 aa32.98■■■□□ 2.87
RAB4B-205ENST00000598430 NACADO15069 1562 aa32.87■■■□□ 2.85
RAB4B-205ENST00000598430 RB1CC1Q8TDY2 1594 aa32.68■■■□□ 2.82
RAB4B-205ENST00000598430 SHROOM4Q9ULL8 1493 aa32.49■■■□□ 2.79
RAB4B-205ENST00000598430 SCRIBQ14160 1630 aa32.28■■■□□ 2.76
RAB4B-205ENST00000598430 UNC13AQ9UPW8 1703 aa31.98■■■□□ 2.71
RAB4B-205ENST00000598430 BICRAQ9NZM4 1560 aa31.74■■■□□ 2.67
RAB4B-205ENST00000598430 PABPN1Q86U42 306 aaKnown RBP eCLIP31.63■■■□□ 2.65
RAB4B-205ENST00000598430 CECR2Q9BXF3 1484 aa31.23■■■□□ 2.59
RAB4B-205ENST00000598430 SUPT5HO00267 1087 aaKnown RBP31.12■■■□□ 2.57
RAB4B-205ENST00000598430 BAZ1AQ9NRL2 1556 aaPredicted RBP31.02■■■□□ 2.56
RAB4B-205ENST00000598430 RSF1Q96T23 1441 aaPredicted RBP31.02■■■□□ 2.56
RAB4B-205ENST00000598430 MROH2BQ7Z745 1585 aa30.99■■■□□ 2.55
RAB4B-205ENST00000598430 SMARCA4P51532 1647 aa30.93■■■□□ 2.54
RAB4B-205ENST00000598430 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
RAB4B-205ENST00000598430 WIZO95785 1651 aa30.75■■■□□ 2.51
RAB4B-205ENST00000598430 PEG3Q9GZU2 1588 aa30.6■■■□□ 2.49
RAB4B-205ENST00000598430 ATAD2BQ9ULI0 1458 aa30.55■■■□□ 2.48
RAB4B-205ENST00000598430 SMARCA2P51531 1590 aa30.5■■■□□ 2.47
RAB4B-205ENST00000598430 CC2D2AQ9P2K1 1620 aa30.43■■■□□ 2.46
RAB4B-205ENST00000598430 TOP2AP11388 1531 aaKnown RBP30.43■■■□□ 2.46
RAB4B-205ENST00000598430 NCAPD3P42695 1498 aa30.36■■■□□ 2.45
RAB4B-205ENST00000598430 BAZ1BQ9UIG0 1483 aaKnown RBP30.32■■■□□ 2.44
RAB4B-205ENST00000598430 HMGXB3Q12766 1538 aa30.28■■■□□ 2.44
RAB4B-205ENST00000598430 DNAJC5BQ9UF47 199 aa30.08■■■□□ 2.41
RAB4B-205ENST00000598430 CCDC88BA6NC98 1476 aa30.08■■■□□ 2.41
RAB4B-205ENST00000598430 CHIC1Q5VXU3 224 aa29.7■■■□□ 2.34
RAB4B-205ENST00000598430 CFTRP13569 1480 aa29.57■■■□□ 2.32
RAB4B-205ENST00000598430 CADPSQ9ULU8 1353 aa29.54■■■□□ 2.32
RAB4B-205ENST00000598430 PRDM2Q13029 1718 aa29.43■■■□□ 2.3
RAB4B-205ENST00000598430 NESP48681 1621 aa29.41■■■□□ 2.3
RAB4B-205ENST00000598430 ABCC8Q09428 1581 aa29.38■■■□□ 2.29
RAB4B-205ENST00000598430 LAMC3Q9Y6N6 1575 aa29.37■■■□□ 2.29
RAB4B-205ENST00000598430 TRIM41Q8WV44 630 aa29.3■■■□□ 2.28
RAB4B-205ENST00000598430 WRNQ14191 1432 aaPredicted RBP eCLIP29.21■■■□□ 2.27
RAB4B-205ENST00000598430 FANCD2Q9BXW9 1451 aa29.2■■■□□ 2.27
RAB4B-205ENST00000598430 PDS5BQ9NTI5 1447 aa29.15■■■□□ 2.26
RAB4B-205ENST00000598430 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
RAB4B-205ENST00000598430 CEP164Q9UPV0 1460 aa29.05■■■□□ 2.24
RAB4B-205ENST00000598430 TOP2BQ02880 1626 aa29.04■■■□□ 2.24
RAB4B-205ENST00000598430 BIVM-ERCC5R4GMW8 1640 aa29.04■■■□□ 2.24
RAB4B-205ENST00000598430 KIF21AQ7Z4S6 1674 aa29.03■■■□□ 2.24
RAB4B-205ENST00000598430 CUX1P39880 1505 aa29.01■■■□□ 2.23
RAB4B-205ENST00000598430 URB2Q14146 1524 aaKnown RBP28.88■■■□□ 2.21
RAB4B-205ENST00000598430 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
RAB4B-205ENST00000598430 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
RAB4B-205ENST00000598430 TOPBP1Q92547 1522 aa28.85■■■□□ 2.21
RAB4B-205ENST00000598430 MRC2Q9UBG0 1479 aa28.81■■■□□ 2.2
RAB4B-205ENST00000598430 SOGA1O94964 1423 aa28.75■■■□□ 2.19
RAB4B-205ENST00000598430 FGD5Q6ZNL6 1462 aa28.74■■■□□ 2.19
RAB4B-205ENST00000598430 FAM9AQ8IZU1 332 aaPredicted RBP28.73■■■□□ 2.19
RAB4B-205ENST00000598430 THOC2Q8NI27 1593 aaKnown RBP28.7■■■□□ 2.19
RAB4B-205ENST00000598430 WDR62O43379 1518 aa28.69■■■□□ 2.18
RAB4B-205ENST00000598430 EEA1Q15075 1411 aa28.68■■■□□ 2.18
RAB4B-205ENST00000598430 POLA1P09884 1462 aaPredicted RBP28.68■■■□□ 2.18
RAB4B-205ENST00000598430 RUSC2Q8N2Y8 1516 aa28.66■■■□□ 2.18
RAB4B-205ENST00000598430 RAD54L2Q9Y4B4 1467 aa28.58■■■□□ 2.17
RAB4B-205ENST00000598430 LOC105371045A0A1W2PR82 267 aa28.53■■■□□ 2.16
RAB4B-205ENST00000598430 CUX2O14529 1486 aa28.51■■■□□ 2.16
RAB4B-205ENST00000598430 CSRNP3Q8WYN3 585 aa28.5■■■□□ 2.15
RAB4B-205ENST00000598430 ABCA10Q8WWZ4 1543 aa28.5■■■□□ 2.15
RAB4B-205ENST00000598430 KIF27Q86VH2 1401 aa28.49■■■□□ 2.15
RAB4B-205ENST00000598430 TARBP1Q13395 1621 aaKnown RBP28.46■■■□□ 2.15
RAB4B-205ENST00000598430 WDR97A6NE52 1622 aa28.45■■■□□ 2.15
RAB4B-205ENST00000598430 IFT140Q96RY7 1462 aa28.39■■■□□ 2.14
RAB4B-205ENST00000598430 KIF21BO75037 1637 aa28.35■■■□□ 2.13
RAB4B-205ENST00000598430 TDRD9Q8NDG6 1382 aaKnown RBP28.33■■■□□ 2.13
RAB4B-205ENST00000598430 EHMT2Q96KQ7 1210 aa28.3■■■□□ 2.12
RAB4B-205ENST00000598430 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
RAB4B-205ENST00000598430 ZNF608Q9ULD9 1512 aaPredicted RBP28.27■■■□□ 2.12
RAB4B-205ENST00000598430 GOLGA3Q08378 1498 aa28.27■■■□□ 2.12
RAB4B-205ENST00000598430 IGF1RP08069 1367 aa28.26■■■□□ 2.12
RAB4B-205ENST00000598430 PRXQ9BXM0 1461 aa28.26■■■□□ 2.11
RAB4B-205ENST00000598430 GAPVD1Q14C86 1478 aa28.25■■■□□ 2.11
RAB4B-205ENST00000598430 AQRO60306 1485 aaKnown RBP eCLIP28.23■■■□□ 2.11
RAB4B-205ENST00000598430 ERICH3Q5RHP9 1530 aa28.2■■■□□ 2.11
RAB4B-205ENST00000598430 RAPGEF2Q9Y4G8 1499 aa28.19■■■□□ 2.1
RAB4B-205ENST00000598430 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
RAB4B-205ENST00000598430 CUL7Q14999 1698 aa28.13■■■□□ 2.09
RAB4B-205ENST00000598430 PBRM1Q86U86 1689 aa28.11■■■□□ 2.09
RAB4B-205ENST00000598430 TNIKQ9UKE5 1360 aa28.11■■■□□ 2.09
RAB4B-205ENST00000598430 CARMIL1Q5VZK9 1371 aa28.1■■■□□ 2.09
RAB4B-205ENST00000598430 GRIN2BQ13224 1484 aa28.09■■■□□ 2.09
RAB4B-205ENST00000598430 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
RAB4B-205ENST00000598430 SNAPC4Q5SXM2 1469 aa27.96■■■□□ 2.07
RAB4B-205ENST00000598430 ADAMTS12P58397 1594 aa27.95■■■□□ 2.07
RAB4B-205ENST00000598430 CEP162Q5TB80 1403 aa27.95■■■□□ 2.06
RAB4B-205ENST00000598430 FHAD1B1AJZ9 1412 aa27.94■■■□□ 2.06
RAB4B-205ENST00000598430 MAGI1Q96QZ7 1491 aaPredicted RBP27.91■■■□□ 2.06
RAB4B-205ENST00000598430 SYNJ2O15056 1496 aa27.81■■■□□ 2.04
RAB4B-205ENST00000598430 CTTNBP2Q8WZ74 1663 aa27.8■■■□□ 2.04
RAB4B-205ENST00000598430 CLIP1P30622 1438 aa27.79■■■□□ 2.04
RAB4B-205ENST00000598430 GRIN2AQ12879 1464 aa27.75■■■□□ 2.03
RAB4B-205ENST00000598430 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 423.5 ms