RNA–Protein interactions for RNA: ENST00000598411.1

SOD3-203, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 276 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-203ENST00000598411 NISCHQ9Y2I1 1504 aa19.63■□□□□ 0.73
SOD3-203ENST00000598411 ABCC9O60706 1549 aa17.81■□□□□ 0.44
SOD3-203ENST00000598411 CCDC180Q9P1Z9 1646 aa17.65■□□□□ 0.42
SOD3-203ENST00000598411 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
SOD3-203ENST00000598411 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
SOD3-203ENST00000598411 UNC13AQ9UPW8 1703 aa16.72■□□□□ 0.27
SOD3-203ENST00000598411 NACADO15069 1562 aa16.65■□□□□ 0.26
SOD3-203ENST00000598411 PABPN1Q86U42 306 aaKnown RBP eCLIP16.55■□□□□ 0.24
SOD3-203ENST00000598411 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
SOD3-203ENST00000598411 DCAF8L2P0C7V8 631 aa16.44■□□□□ 0.22
SOD3-203ENST00000598411 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
SOD3-203ENST00000598411 ZCCHC6Q5VYS8 1495 aaKnown RBP16.26■□□□□ 0.19
SOD3-203ENST00000598411 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.18
SOD3-203ENST00000598411 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
SOD3-203ENST00000598411 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
SOD3-203ENST00000598411 EIF4G1Q04637 1599 aaKnown RBP16.02■□□□□ 0.16
SOD3-203ENST00000598411 CECR2Q9BXF3 1484 aa16■□□□□ 0.15
SOD3-203ENST00000598411 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
SOD3-203ENST00000598411 DNAJC5Q9H3Z4 198 aa15.47■□□□□ 0.07
SOD3-203ENST00000598411 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
SOD3-203ENST00000598411 ATAD2BQ9ULI0 1458 aa15.39■□□□□ 0.05
SOD3-203ENST00000598411 SMARCA4P51532 1647 aa15.37■□□□□ 0.05
SOD3-203ENST00000598411 NESP48681 1621 aa15.35■□□□□ 0.05
SOD3-203ENST00000598411 HMGXB3Q12766 1538 aa15.28■□□□□ 0.04
SOD3-203ENST00000598411 CUX2O14529 1486 aa15.27■□□□□ 0.04
SOD3-203ENST00000598411 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
SOD3-203ENST00000598411 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
SOD3-203ENST00000598411 THOC2Q8NI27 1593 aaKnown RBP15.21■□□□□ 0.03
SOD3-203ENST00000598411 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
SOD3-203ENST00000598411 PEG3Q9GZU2 1588 aa15.2■□□□□ 0.02
SOD3-203ENST00000598411 KIF21AQ7Z4S6 1674 aa15.16■□□□□ 0.02
SOD3-203ENST00000598411 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
SOD3-203ENST00000598411 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
SOD3-203ENST00000598411 LAMC3Q9Y6N6 1575 aa15.05■□□□□ -0
SOD3-203ENST00000598411 WIZO95785 1651 aa15.03■□□□□ -0
SOD3-203ENST00000598411 CADPSQ9ULU8 1353 aa14.89□□□□□ -0.03
SOD3-203ENST00000598411 WDR62O43379 1518 aa14.88□□□□□ -0.03
SOD3-203ENST00000598411 PDS5BQ9NTI5 1447 aa14.87□□□□□ -0.03
SOD3-203ENST00000598411 MRC2Q9UBG0 1479 aa14.86□□□□□ -0.03
SOD3-203ENST00000598411 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
SOD3-203ENST00000598411 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
SOD3-203ENST00000598411 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
SOD3-203ENST00000598411 CFTRP13569 1480 aa14.75□□□□□ -0.05
SOD3-203ENST00000598411 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
SOD3-203ENST00000598411 TOP2AP11388 1531 aaKnown RBP14.72□□□□□ -0.05
SOD3-203ENST00000598411 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
SOD3-203ENST00000598411 PRDM2Q13029 1718 aa14.68□□□□□ -0.06
SOD3-203ENST00000598411 ZNF608Q9ULD9 1512 aaPredicted RBP14.61□□□□□ -0.07
SOD3-203ENST00000598411 CCDC88BA6NC98 1476 aa14.59□□□□□ -0.07
SOD3-203ENST00000598411 RIMBP3CA6NJZ7 1639 aa14.54□□□□□ -0.08
SOD3-203ENST00000598411 RIMBP3BA6NNM3 1639 aa14.54□□□□□ -0.08
SOD3-203ENST00000598411 RIMBP3Q9UFD9 1639 aa14.54□□□□□ -0.08
SOD3-203ENST00000598411 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
SOD3-203ENST00000598411 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
SOD3-203ENST00000598411 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
SOD3-203ENST00000598411 TARBP1Q13395 1621 aaKnown RBP14.47□□□□□ -0.09
SOD3-203ENST00000598411 CHD1O14646 1710 aa14.46□□□□□ -0.1
SOD3-203ENST00000598411 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
SOD3-203ENST00000598411 ARHGEF11O15085 1522 aa14.43□□□□□ -0.1
SOD3-203ENST00000598411 DNMBPQ6XZF7 1577 aa14.42□□□□□ -0.1
SOD3-203ENST00000598411 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.11
SOD3-203ENST00000598411 POLA1P09884 1462 aaPredicted RBP14.36□□□□□ -0.11
SOD3-203ENST00000598411 RAD54L2Q9Y4B4 1467 aa14.35□□□□□ -0.11
SOD3-203ENST00000598411 ARAP1Q96P48 1450 aa14.32□□□□□ -0.12
SOD3-203ENST00000598411 CUX1P39880 1505 aa14.29□□□□□ -0.12
SOD3-203ENST00000598411 ABCC8Q09428 1581 aa14.27□□□□□ -0.12
SOD3-203ENST00000598411 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
SOD3-203ENST00000598411 TDRD9Q8NDG6 1382 aaKnown RBP14.25□□□□□ -0.13
SOD3-203ENST00000598411 FGD5Q6ZNL6 1462 aa14.25□□□□□ -0.13
SOD3-203ENST00000598411 CYB5RLQ6IPT4 315 aa14.24□□□□□ -0.13
SOD3-203ENST00000598411 CLASP1Q7Z460 1538 aa14.24□□□□□ -0.13
SOD3-203ENST00000598411 SNAPC4Q5SXM2 1469 aa14.22□□□□□ -0.13
SOD3-203ENST00000598411 SOGA1O94964 1423 aa14.2□□□□□ -0.14
SOD3-203ENST00000598411 PBRM1Q86U86 1689 aa14.17□□□□□ -0.14
SOD3-203ENST00000598411 FBLN2P98095 1184 aa14.15□□□□□ -0.14
SOD3-203ENST00000598411 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
SOD3-203ENST00000598411 ABCA5Q8WWZ7 1642 aa14.12□□□□□ -0.15
SOD3-203ENST00000598411 MAGI1Q96QZ7 1491 aaPredicted RBP14.1□□□□□ -0.15
SOD3-203ENST00000598411 GRIN2BQ13224 1484 aa14.08□□□□□ -0.16
SOD3-203ENST00000598411 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
SOD3-203ENST00000598411 SYNJ2O15056 1496 aa14.06□□□□□ -0.16
SOD3-203ENST00000598411 GAPVD1Q14C86 1478 aa14.05□□□□□ -0.16
SOD3-203ENST00000598411 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
SOD3-203ENST00000598411 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
SOD3-203ENST00000598411 CEP170Q5SW79 1584 aa14.01□□□□□ -0.17
SOD3-203ENST00000598411 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
SOD3-203ENST00000598411 ADAMTS12P58397 1594 aa14□□□□□ -0.17
SOD3-203ENST00000598411 BIVM-ERCC5R4GMW8 1640 aa13.99□□□□□ -0.17
SOD3-203ENST00000598411 GRIN2AQ12879 1464 aa13.96□□□□□ -0.17
SOD3-203ENST00000598411 SHROOM2Q13796 1616 aa13.96□□□□□ -0.17
SOD3-203ENST00000598411 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
SOD3-203ENST00000598411 NUP160Q12769 1436 aa13.94□□□□□ -0.18
SOD3-203ENST00000598411 KIF13AQ9H1H9 1805 aa13.92□□□□□ -0.18
SOD3-203ENST00000598411 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
SOD3-203ENST00000598411 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
SOD3-203ENST00000598411 FHAD1B1AJZ9 1412 aa13.83□□□□□ -0.2
SOD3-203ENST00000598411 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
SOD3-203ENST00000598411 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
SOD3-203ENST00000598411 ADCY10Q96PN6 1610 aa13.76□□□□□ -0.21
SOD3-203ENST00000598411 PRG4Q92954 1404 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms