RNA–Protein interactions for RNA: ENST00000598362.1

GRAMD1A-208, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-208ENST00000598362 NISCHQ9Y2I1 1504 aa18.15■□□□□ 0.5
GRAMD1A-208ENST00000598362 ABCC9O60706 1549 aa16.5■□□□□ 0.23
GRAMD1A-208ENST00000598362 CCDC180Q9P1Z9 1646 aa16.12■□□□□ 0.17
GRAMD1A-208ENST00000598362 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
GRAMD1A-208ENST00000598362 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
GRAMD1A-208ENST00000598362 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.052e-6■□□□□ 10
GRAMD1A-208ENST00000598362 NACADO15069 1562 aa15.35■□□□□ 0.05
GRAMD1A-208ENST00000598362 DCAF8L2P0C7V8 631 aa15.28■□□□□ 0.04
GRAMD1A-208ENST00000598362 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
GRAMD1A-208ENST00000598362 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
GRAMD1A-208ENST00000598362 MYO15BQ96JP2 1530 aa15.05■□□□□ -0
GRAMD1A-208ENST00000598362 BICRAQ9NZM4 1560 aa15.04■□□□□ -0
GRAMD1A-208ENST00000598362 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
GRAMD1A-208ENST00000598362 DNAJC5Q9H3Z4 198 aa14.99□□□□□ -0.01
GRAMD1A-208ENST00000598362 CECR2Q9BXF3 1484 aa14.94□□□□□ -0.02
GRAMD1A-208ENST00000598362 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
GRAMD1A-208ENST00000598362 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
GRAMD1A-208ENST00000598362 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
GRAMD1A-208ENST00000598362 SCRIBQ14160 1630 aa14.72□□□□□ -0.05
GRAMD1A-208ENST00000598362 CUX2O14529 1486 aa14.44□□□□□ -0.1
GRAMD1A-208ENST00000598362 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
GRAMD1A-208ENST00000598362 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
GRAMD1A-208ENST00000598362 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
GRAMD1A-208ENST00000598362 SMARCA4P51532 1647 aa14.08□□□□□ -0.15
GRAMD1A-208ENST00000598362 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
GRAMD1A-208ENST00000598362 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
GRAMD1A-208ENST00000598362 NESP48681 1621 aa14.03□□□□□ -0.16
GRAMD1A-208ENST00000598362 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
GRAMD1A-208ENST00000598362 HMGXB3Q12766 1538 aa14□□□□□ -0.17
GRAMD1A-208ENST00000598362 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
GRAMD1A-208ENST00000598362 PEG3Q9GZU2 1588 aa13.94□□□□□ -0.18
GRAMD1A-208ENST00000598362 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
GRAMD1A-208ENST00000598362 PDS5BQ9NTI5 1447 aa13.91□□□□□ -0.18
GRAMD1A-208ENST00000598362 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
GRAMD1A-208ENST00000598362 BAZ1BQ9UIG0 1483 aaKnown RBP13.9□□□□□ -0.18
GRAMD1A-208ENST00000598362 WIZO95785 1651 aa13.85□□□□□ -0.19
GRAMD1A-208ENST00000598362 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
GRAMD1A-208ENST00000598362 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
GRAMD1A-208ENST00000598362 KIF21AQ7Z4S6 1674 aa13.78□□□□□ -0.2
GRAMD1A-208ENST00000598362 CADPSQ9ULU8 1353 aa13.77□□□□□ -0.21
GRAMD1A-208ENST00000598362 TOP2AP11388 1531 aaKnown RBP13.74□□□□□ -0.21
GRAMD1A-208ENST00000598362 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
GRAMD1A-208ENST00000598362 WDR62O43379 1518 aa13.69□□□□□ -0.22
GRAMD1A-208ENST00000598362 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
GRAMD1A-208ENST00000598362 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
GRAMD1A-208ENST00000598362 SUPT5HO00267 1087 aaKnown RBP13.54□□□□□ -0.24
GRAMD1A-208ENST00000598362 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
GRAMD1A-208ENST00000598362 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
GRAMD1A-208ENST00000598362 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
GRAMD1A-208ENST00000598362 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
GRAMD1A-208ENST00000598362 CFTRP13569 1480 aa13.48□□□□□ -0.25
GRAMD1A-208ENST00000598362 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
GRAMD1A-208ENST00000598362 CYB5RLQ6IPT4 315 aa13.48□□□□□ -0.25
GRAMD1A-208ENST00000598362 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
GRAMD1A-208ENST00000598362 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
GRAMD1A-208ENST00000598362 AEBP2Q6ZN18 517 aaPredicted RBP13.43□□□□□ -0.26
GRAMD1A-208ENST00000598362 PRDM2Q13029 1718 aa13.42□□□□□ -0.26
GRAMD1A-208ENST00000598362 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
GRAMD1A-208ENST00000598362 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
GRAMD1A-208ENST00000598362 FBLN2P98095 1184 aa13.28□□□□□ -0.28
GRAMD1A-208ENST00000598362 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
GRAMD1A-208ENST00000598362 ARAP1Q96P48 1450 aa13.27□□□□□ -0.29
GRAMD1A-208ENST00000598362 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
GRAMD1A-208ENST00000598362 AQRO60306 1485 aaKnown RBP eCLIP13.22□□□□□ -0.298e-8■■■■□ 19.3
GRAMD1A-208ENST00000598362 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
GRAMD1A-208ENST00000598362 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
GRAMD1A-208ENST00000598362 CHD1O14646 1710 aa13.16□□□□□ -0.3
GRAMD1A-208ENST00000598362 CHMP7Q8WUX9 453 aaPredicted RBP13.14□□□□□ -0.31
GRAMD1A-208ENST00000598362 CUX1P39880 1505 aa13.13□□□□□ -0.31
GRAMD1A-208ENST00000598362 TARBP1Q13395 1621 aaKnown RBP13.12□□□□□ -0.31
GRAMD1A-208ENST00000598362 TDRD9Q8NDG6 1382 aaKnown RBP13.09□□□□□ -0.31
GRAMD1A-208ENST00000598362 SOGA1O94964 1423 aa13.08□□□□□ -0.32
GRAMD1A-208ENST00000598362 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
GRAMD1A-208ENST00000598362 WRNQ14191 1432 aaPredicted RBP eCLIP13.07□□□□□ -0.32
GRAMD1A-208ENST00000598362 BIVM-ERCC5R4GMW8 1640 aa13.07□□□□□ -0.32
GRAMD1A-208ENST00000598362 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
GRAMD1A-208ENST00000598362 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
GRAMD1A-208ENST00000598362 TOP2BQ02880 1626 aa13.06□□□□□ -0.32
GRAMD1A-208ENST00000598362 CLASP1Q7Z460 1538 aa13.05□□□□□ -0.32
GRAMD1A-208ENST00000598362 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
GRAMD1A-208ENST00000598362 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
GRAMD1A-208ENST00000598362 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.33
GRAMD1A-208ENST00000598362 WDR97A6NE52 1622 aa13□□□□□ -0.33
GRAMD1A-208ENST00000598362 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
GRAMD1A-208ENST00000598362 SYNJ2O15056 1496 aa12.98□□□□□ -0.33
GRAMD1A-208ENST00000598362 GRIN2BQ13224 1484 aa12.98□□□□□ -0.33
GRAMD1A-208ENST00000598362 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
GRAMD1A-208ENST00000598362 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
GRAMD1A-208ENST00000598362 PBRM1Q86U86 1689 aa12.87□□□□□ -0.35
GRAMD1A-208ENST00000598362 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
GRAMD1A-208ENST00000598362 NPM1P06748 294 aaKnown RBP eCLIP12.81□□□□□ -0.36
GRAMD1A-208ENST00000598362 FAM69CQ0P6D2 419 aa12.8□□□□□ -0.36
GRAMD1A-208ENST00000598362 ADAMTS12P58397 1594 aa12.8□□□□□ -0.36
GRAMD1A-208ENST00000598362 ERICH3Q5RHP9 1530 aa12.79□□□□□ -0.36
GRAMD1A-208ENST00000598362 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
GRAMD1A-208ENST00000598362 ERCC6L2Q5T890 1561 aa12.78□□□□□ -0.36
GRAMD1A-208ENST00000598362 KIF27Q86VH2 1401 aa12.78□□□□□ -0.36
GRAMD1A-208ENST00000598362 CEP170Q5SW79 1584 aa12.77□□□□□ -0.36
GRAMD1A-208ENST00000598362 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
GRAMD1A-208ENST00000598362 NUP160Q12769 1436 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms