RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 NISCHQ9Y2I1 1504 aa30.66■■■□□ 2.5
SYMPK-210ENST00000598329 CCDC180Q9P1Z9 1646 aa27.21■■□□□ 1.95
SYMPK-210ENST00000598329 ABCC9O60706 1549 aa26.59■■□□□ 1.85
SYMPK-210ENST00000598329 NACADO15069 1562 aa25.65■■□□□ 1.7
SYMPK-210ENST00000598329 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
SYMPK-210ENST00000598329 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
SYMPK-210ENST00000598329 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
SYMPK-210ENST00000598329 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.66
SYMPK-210ENST00000598329 DCAF1Q9Y4B6 1507 aa25.45■■□□□ 1.66
SYMPK-210ENST00000598329 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.59
SYMPK-210ENST00000598329 BICRAQ9NZM4 1560 aa24.89■■□□□ 1.58
SYMPK-210ENST00000598329 PABPN1Q86U42 306 aaKnown RBP eCLIP24.86■■□□□ 1.572e-6■■□□□ 14.5
SYMPK-210ENST00000598329 SCRIBQ14160 1630 aa24.72■■□□□ 1.55
SYMPK-210ENST00000598329 SHROOM4Q9ULL8 1493 aa24.71■■□□□ 1.55
SYMPK-210ENST00000598329 DNAJC5BQ9UF47 199 aa24.54■■□□□ 1.52
SYMPK-210ENST00000598329 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.47
SYMPK-210ENST00000598329 CC2D2AQ9P2K1 1620 aa24.07■■□□□ 1.44
SYMPK-210ENST00000598329 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
SYMPK-210ENST00000598329 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
SYMPK-210ENST00000598329 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
SYMPK-210ENST00000598329 NCAPD3P42695 1498 aa23.73■■□□□ 1.39
SYMPK-210ENST00000598329 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
SYMPK-210ENST00000598329 SMARCA2P51531 1590 aa23.61■■□□□ 1.37
SYMPK-210ENST00000598329 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
SYMPK-210ENST00000598329 MROH2BQ7Z745 1585 aa23.59■■□□□ 1.37
SYMPK-210ENST00000598329 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
SYMPK-210ENST00000598329 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
SYMPK-210ENST00000598329 RSF1Q96T23 1441 aaPredicted RBP23.36■■□□□ 1.33
SYMPK-210ENST00000598329 WIZO95785 1651 aa23.26■■□□□ 1.31
SYMPK-210ENST00000598329 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.28
SYMPK-210ENST00000598329 NESP48681 1621 aa23.03■■□□□ 1.28
SYMPK-210ENST00000598329 LAMC3Q9Y6N6 1575 aa23.01■■□□□ 1.27
SYMPK-210ENST00000598329 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
SYMPK-210ENST00000598329 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
SYMPK-210ENST00000598329 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
SYMPK-210ENST00000598329 CFTRP13569 1480 aa22.86■■□□□ 1.25
SYMPK-210ENST00000598329 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.25
SYMPK-210ENST00000598329 CUX2O14529 1486 aa22.79■■□□□ 1.24
SYMPK-210ENST00000598329 THOC2Q8NI27 1593 aaKnown RBP22.69■■□□□ 1.22
SYMPK-210ENST00000598329 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
SYMPK-210ENST00000598329 FANCD2Q9BXW9 1451 aa22.66■■□□□ 1.22
SYMPK-210ENST00000598329 MRC2Q9UBG0 1479 aa22.61■■□□□ 1.21
SYMPK-210ENST00000598329 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
SYMPK-210ENST00000598329 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
SYMPK-210ENST00000598329 WDR62O43379 1518 aa22.56■■□□□ 1.2
SYMPK-210ENST00000598329 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
SYMPK-210ENST00000598329 URB2Q14146 1524 aaKnown RBP22.45■■□□□ 1.18
SYMPK-210ENST00000598329 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
SYMPK-210ENST00000598329 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
SYMPK-210ENST00000598329 DNMBPQ6XZF7 1577 aa22.26■■□□□ 1.15
SYMPK-210ENST00000598329 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
SYMPK-210ENST00000598329 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
SYMPK-210ENST00000598329 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
SYMPK-210ENST00000598329 CUX1P39880 1505 aa22.12■■□□□ 1.13
SYMPK-210ENST00000598329 TARBP1Q13395 1621 aaKnown RBP22.07■■□□□ 1.12
SYMPK-210ENST00000598329 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
SYMPK-210ENST00000598329 SOGA1O94964 1423 aa22.04■■□□□ 1.12
SYMPK-210ENST00000598329 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
SYMPK-210ENST00000598329 RAD54L2Q9Y4B4 1467 aa21.99■■□□□ 1.11
SYMPK-210ENST00000598329 WRNQ14191 1432 aaPredicted RBP eCLIP21.98■■□□□ 1.11
SYMPK-210ENST00000598329 WDR97A6NE52 1622 aa21.94■■□□□ 1.1
SYMPK-210ENST00000598329 TOP2BQ02880 1626 aa21.94■■□□□ 1.1
SYMPK-210ENST00000598329 AQRO60306 1485 aaKnown RBP eCLIP21.93■■□□□ 1.17e-7■■■■□ 24.9
SYMPK-210ENST00000598329 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
SYMPK-210ENST00000598329 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
SYMPK-210ENST00000598329 TDRD9Q8NDG6 1382 aaKnown RBP21.89■■□□□ 1.1
SYMPK-210ENST00000598329 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.09
SYMPK-210ENST00000598329 SYNJ1O43426 1573 aa21.88■■□□□ 1.09
SYMPK-210ENST00000598329 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
SYMPK-210ENST00000598329 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
SYMPK-210ENST00000598329 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.07
SYMPK-210ENST00000598329 ABCA5Q8WWZ7 1642 aa21.74■■□□□ 1.07
SYMPK-210ENST00000598329 MAGI1Q96QZ7 1491 aaPredicted RBP21.74■■□□□ 1.07
SYMPK-210ENST00000598329 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
SYMPK-210ENST00000598329 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
SYMPK-210ENST00000598329 ERICH3Q5RHP9 1530 aa21.61■■□□□ 1.05
SYMPK-210ENST00000598329 PBRM1Q86U86 1689 aa21.61■■□□□ 1.05
SYMPK-210ENST00000598329 CHMP7Q8WUX9 453 aaPredicted RBP21.61■■□□□ 1.05
SYMPK-210ENST00000598329 CHD1O14646 1710 aa21.59■■□□□ 1.05
SYMPK-210ENST00000598329 FBLN2P98095 1184 aa21.58■■□□□ 1.05
SYMPK-210ENST00000598329 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
SYMPK-210ENST00000598329 KIF27Q86VH2 1401 aa21.53■■□□□ 1.04
SYMPK-210ENST00000598329 ADAMTS12P58397 1594 aa21.52■■□□□ 1.04
SYMPK-210ENST00000598329 IGF1RP08069 1367 aa21.51■■□□□ 1.03
SYMPK-210ENST00000598329 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
SYMPK-210ENST00000598329 GRIN2AQ12879 1464 aa21.49■■□□□ 1.03
SYMPK-210ENST00000598329 NUP160Q12769 1436 aa21.46■■□□□ 1.03
SYMPK-210ENST00000598329 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
SYMPK-210ENST00000598329 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
SYMPK-210ENST00000598329 RIMBP3CA6NJZ7 1639 aa21.39■■□□□ 1.01
SYMPK-210ENST00000598329 RIMBP3BA6NNM3 1639 aa21.39■■□□□ 1.01
SYMPK-210ENST00000598329 RIMBP3Q9UFD9 1639 aa21.39■■□□□ 1.01
SYMPK-210ENST00000598329 CEP170Q5SW79 1584 aa21.36■■□□□ 1.01
SYMPK-210ENST00000598329 CUL7Q14999 1698 aa21.34■■□□□ 1.01
SYMPK-210ENST00000598329 CARMIL1Q5VZK9 1371 aa21.33■■□□□ 1
SYMPK-210ENST00000598329 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
SYMPK-210ENST00000598329 ARAP1Q96P48 1450 aa21.27■■□□□ 1
SYMPK-210ENST00000598329 SHROOM2Q13796 1616 aa21.26■□□□□ 0.99
SYMPK-210ENST00000598329 KIAA0586Q9BVV6 1533 aa21.24■□□□□ 0.99
SYMPK-210ENST00000598329 JPH4Q96JJ6 628 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms