RNA–Protein interactions for RNA: ENST00000598277.5

DDX49-206, Transcript of DEAD-box helicase 49, humanhuman

TSL 2

Gene DDX49, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-206ENST00000598277 NISCHQ9Y2I1 1504 aa38.19■■■■□ 3.7
DDX49-206ENST00000598277 CCDC180Q9P1Z9 1646 aa34.17■■■■□ 3.06
DDX49-206ENST00000598277 ABCC9O60706 1549 aa33.33■■■□□ 2.93
DDX49-206ENST00000598277 RB1CC1Q8TDY2 1594 aa32.15■■■□□ 2.74
DDX49-206ENST00000598277 NACADO15069 1562 aa32.11■■■□□ 2.73
DDX49-206ENST00000598277 MYO15BQ96JP2 1530 aa31.99■■■□□ 2.71
DDX49-206ENST00000598277 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
DDX49-206ENST00000598277 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
DDX49-206ENST00000598277 DCAF8L2P0C7V8 631 aa31.57■■■□□ 2.64
DDX49-206ENST00000598277 UNC13AQ9UPW8 1703 aa31.46■■■□□ 2.63
DDX49-206ENST00000598277 BICRAQ9NZM4 1560 aa31.22■■■□□ 2.59
DDX49-206ENST00000598277 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.56
DDX49-206ENST00000598277 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
DDX49-206ENST00000598277 SCRIBQ14160 1630 aa30.93■■■□□ 2.54
DDX49-206ENST00000598277 DNAJC5BQ9UF47 199 aa30.77■■■□□ 2.52
DDX49-206ENST00000598277 EIF4G1Q04637 1599 aaKnown RBP30.37■■■□□ 2.45
DDX49-206ENST00000598277 CC2D2AQ9P2K1 1620 aa30.26■■■□□ 2.44
DDX49-206ENST00000598277 CECR2Q9BXF3 1484 aa30.04■■■□□ 2.4
DDX49-206ENST00000598277 SMARCA4P51532 1647 aa29.68■■■□□ 2.34
DDX49-206ENST00000598277 BAZ1AQ9NRL2 1556 aaPredicted RBP29.63■■■□□ 2.33
DDX49-206ENST00000598277 NCAPD3P42695 1498 aa29.62■■■□□ 2.33
DDX49-206ENST00000598277 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
DDX49-206ENST00000598277 SMARCA2P51531 1590 aa29.54■■■□□ 2.32
DDX49-206ENST00000598277 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
DDX49-206ENST00000598277 HMGXB3Q12766 1538 aa29.5■■■□□ 2.31
DDX49-206ENST00000598277 MROH2BQ7Z745 1585 aa29.37■■■□□ 2.29
DDX49-206ENST00000598277 BAZ1BQ9UIG0 1483 aaKnown RBP29.24■■■□□ 2.27
DDX49-206ENST00000598277 WIZO95785 1651 aa29.03■■■□□ 2.24
DDX49-206ENST00000598277 RSF1Q96T23 1441 aaPredicted RBP28.97■■■□□ 2.23
DDX49-206ENST00000598277 LAMC3Q9Y6N6 1575 aa28.88■■■□□ 2.21
DDX49-206ENST00000598277 NESP48681 1621 aa28.81■■■□□ 2.2
DDX49-206ENST00000598277 TOP2AP11388 1531 aaKnown RBP28.79■■■□□ 2.2
DDX49-206ENST00000598277 ERCC6Q03468 1493 aa28.74■■■□□ 2.19
DDX49-206ENST00000598277 CUX2O14529 1486 aa28.7■■■□□ 2.18
DDX49-206ENST00000598277 CADPSQ9ULU8 1353 aa28.66■■■□□ 2.18
DDX49-206ENST00000598277 PDS5BQ9NTI5 1447 aa28.6■■■□□ 2.17
DDX49-206ENST00000598277 THOC2Q8NI27 1593 aaKnown RBP28.58■■■□□ 2.17
DDX49-206ENST00000598277 KIF21AQ7Z4S6 1674 aa28.56■■■□□ 2.16
DDX49-206ENST00000598277 CFTRP13569 1480 aa28.52■■■□□ 2.16
DDX49-206ENST00000598277 CCDC88BA6NC98 1476 aa28.38■■■□□ 2.13
DDX49-206ENST00000598277 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
DDX49-206ENST00000598277 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
DDX49-206ENST00000598277 FANCD2Q9BXW9 1451 aa28.32■■■□□ 2.12
DDX49-206ENST00000598277 WDR62O43379 1518 aa28.32■■■□□ 2.12
DDX49-206ENST00000598277 CEP164Q9UPV0 1460 aa28.31■■■□□ 2.12
DDX49-206ENST00000598277 URB2Q14146 1524 aaKnown RBP28.07■■■□□ 2.08
DDX49-206ENST00000598277 DNAJC5Q9H3Z4 198 aa27.93■■■□□ 2.06
DDX49-206ENST00000598277 ABCC8Q09428 1581 aa27.92■■■□□ 2.06
DDX49-206ENST00000598277 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
DDX49-206ENST00000598277 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
DDX49-206ENST00000598277 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
DDX49-206ENST00000598277 IFT140Q96RY7 1462 aa27.76■■■□□ 2.04
DDX49-206ENST00000598277 TARBP1Q13395 1621 aaKnown RBP27.65■■■□□ 2.02
DDX49-206ENST00000598277 POLA1P09884 1462 aaPredicted RBP27.62■■■□□ 2.01
DDX49-206ENST00000598277 CUX1P39880 1505 aa27.58■■■□□ 2.01
DDX49-206ENST00000598277 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
DDX49-206ENST00000598277 WDR97A6NE52 1622 aa27.53■■■□□ 2
DDX49-206ENST00000598277 EIF4G3O43432 1585 aaKnown RBP27.53■■■□□ 2
DDX49-206ENST00000598277 FGD5Q6ZNL6 1462 aa27.49■■□□□ 1.99
DDX49-206ENST00000598277 SOGA1O94964 1423 aa27.43■■□□□ 1.98
DDX49-206ENST00000598277 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
DDX49-206ENST00000598277 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
DDX49-206ENST00000598277 AQRO60306 1485 aaKnown RBP eCLIP27.36■■□□□ 1.97
DDX49-206ENST00000598277 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
DDX49-206ENST00000598277 OSCARQ8IYS5 282 aa27.3■■□□□ 1.96
DDX49-206ENST00000598277 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
DDX49-206ENST00000598277 ABCA10Q8WWZ4 1543 aa27.3■■□□□ 1.96
DDX49-206ENST00000598277 SYNJ1O43426 1573 aa27.26■■□□□ 1.96
DDX49-206ENST00000598277 TDRD9Q8NDG6 1382 aaKnown RBP27.24■■□□□ 1.95
DDX49-206ENST00000598277 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
DDX49-206ENST00000598277 CHD1O14646 1710 aa27.21■■□□□ 1.95
DDX49-206ENST00000598277 GRIN2BQ13224 1484 aa27.2■■□□□ 1.95
DDX49-206ENST00000598277 MAGI1Q96QZ7 1491 aaPredicted RBP27.2■■□□□ 1.95
DDX49-206ENST00000598277 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
DDX49-206ENST00000598277 GAPVD1Q14C86 1478 aa27.15■■□□□ 1.94
DDX49-206ENST00000598277 SNAPC4Q5SXM2 1469 aa27.14■■□□□ 1.94
DDX49-206ENST00000598277 SYNJ2O15056 1496 aa27.06■■□□□ 1.92
DDX49-206ENST00000598277 CLASP1Q7Z460 1538 aa26.99■■□□□ 1.91
DDX49-206ENST00000598277 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
DDX49-206ENST00000598277 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
DDX49-206ENST00000598277 RIMBP3Q9UFD9 1639 aa26.98■■□□□ 1.91
DDX49-206ENST00000598277 ERICH3Q5RHP9 1530 aa26.98■■□□□ 1.91
DDX49-206ENST00000598277 ARHGEF11O15085 1522 aa26.95■■□□□ 1.91
DDX49-206ENST00000598277 ADAMTS12P58397 1594 aa26.95■■□□□ 1.9
DDX49-206ENST00000598277 CHMP7Q8WUX9 453 aaPredicted RBP26.9■■□□□ 1.9
DDX49-206ENST00000598277 FBLN2P98095 1184 aa26.89■■□□□ 1.9
DDX49-206ENST00000598277 FHAD1B1AJZ9 1412 aa26.86■■□□□ 1.89
DDX49-206ENST00000598277 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
DDX49-206ENST00000598277 NUP160Q12769 1436 aa26.8■■□□□ 1.88
DDX49-206ENST00000598277 KIF27Q86VH2 1401 aa26.74■■□□□ 1.87
DDX49-206ENST00000598277 CEP170Q5SW79 1584 aa26.74■■□□□ 1.87
DDX49-206ENST00000598277 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
DDX49-206ENST00000598277 CUL7Q14999 1698 aa26.7■■□□□ 1.87
DDX49-206ENST00000598277 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
DDX49-206ENST00000598277 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
DDX49-206ENST00000598277 IGF1RP08069 1367 aa26.66■■□□□ 1.86
DDX49-206ENST00000598277 RUSC2Q8N2Y8 1516 aa26.57■■□□□ 1.84
DDX49-206ENST00000598277 CYB5RLQ6IPT4 315 aa26.52■■□□□ 1.84
DDX49-206ENST00000598277 ERCC6L2Q5T890 1561 aa26.48■■□□□ 1.83
DDX49-206ENST00000598277 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms