RNA–Protein interactions for RNA: ENST00000598258.5

TMEM143-208, Transcript of transmembrane protein 143, humanhuman

TSL 4

Gene TMEM143, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-208ENST00000598258 NISCHQ9Y2I1 1504 aa37.67■■■■□ 3.62
TMEM143-208ENST00000598258 CCDC180Q9P1Z9 1646 aa33.53■■■□□ 2.96
TMEM143-208ENST00000598258 ABCC9O60706 1549 aa32.92■■■□□ 2.86
TMEM143-208ENST00000598258 RB1CC1Q8TDY2 1594 aa31.53■■■□□ 2.64
TMEM143-208ENST00000598258 NACADO15069 1562 aa31.47■■■□□ 2.63
TMEM143-208ENST00000598258 ZCCHC6Q5VYS8 1495 aaKnown RBP31.39■■■□□ 2.62
TMEM143-208ENST00000598258 DCAF8L2P0C7V8 631 aa31.37■■■□□ 2.61
TMEM143-208ENST00000598258 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
TMEM143-208ENST00000598258 UNC13AQ9UPW8 1703 aa31.11■■■□□ 2.57
TMEM143-208ENST00000598258 DCAF1Q9Y4B6 1507 aa31.1■■■□□ 2.57
TMEM143-208ENST00000598258 BICRAQ9NZM4 1560 aa30.78■■■□□ 2.52
TMEM143-208ENST00000598258 PABPN1Q86U42 306 aaKnown RBP eCLIP30.72■■■□□ 2.51
TMEM143-208ENST00000598258 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
TMEM143-208ENST00000598258 DNAJC5BQ9UF47 199 aa30.39■■■□□ 2.46
TMEM143-208ENST00000598258 SHROOM4Q9ULL8 1493 aa30.17■■■□□ 2.42
TMEM143-208ENST00000598258 EIF4G1Q04637 1599 aaKnown RBP29.87■■■□□ 2.37
TMEM143-208ENST00000598258 CC2D2AQ9P2K1 1620 aa29.8■■■□□ 2.36
TMEM143-208ENST00000598258 CECR2Q9BXF3 1484 aa29.52■■■□□ 2.32
TMEM143-208ENST00000598258 SMARCA4P51532 1647 aa29.29■■■□□ 2.28
TMEM143-208ENST00000598258 BAZ1AQ9NRL2 1556 aaPredicted RBP29.14■■■□□ 2.26
TMEM143-208ENST00000598258 ATAD2BQ9ULI0 1458 aa29.11■■■□□ 2.25
TMEM143-208ENST00000598258 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
TMEM143-208ENST00000598258 NCAPD3P42695 1498 aa29.06■■■□□ 2.24
TMEM143-208ENST00000598258 SMARCA2P51531 1590 aa28.99■■■□□ 2.23
TMEM143-208ENST00000598258 PEG3Q9GZU2 1588 aa28.98■■■□□ 2.23
TMEM143-208ENST00000598258 HMGXB3Q12766 1538 aa28.93■■■□□ 2.22
TMEM143-208ENST00000598258 WIZO95785 1651 aa28.83■■■□□ 2.21
TMEM143-208ENST00000598258 BAZ1BQ9UIG0 1483 aaKnown RBP28.81■■■□□ 2.2
TMEM143-208ENST00000598258 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
TMEM143-208ENST00000598258 NESP48681 1621 aa28.54■■■□□ 2.16
TMEM143-208ENST00000598258 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
TMEM143-208ENST00000598258 LAMC3Q9Y6N6 1575 aa28.31■■■□□ 2.12
TMEM143-208ENST00000598258 ERCC6Q03468 1493 aa28.24■■■□□ 2.11
TMEM143-208ENST00000598258 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
TMEM143-208ENST00000598258 CADPSQ9ULU8 1353 aa28.18■■■□□ 2.1
TMEM143-208ENST00000598258 THOC2Q8NI27 1593 aaKnown RBP28.11■■■□□ 2.09
TMEM143-208ENST00000598258 CCDC88BA6NC98 1476 aa28.09■■■□□ 2.09
TMEM143-208ENST00000598258 CFTRP13569 1480 aa28.04■■■□□ 2.08
TMEM143-208ENST00000598258 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.08
TMEM143-208ENST00000598258 CUX2O14529 1486 aa27.99■■■□□ 2.07
TMEM143-208ENST00000598258 PRDM2Q13029 1718 aa27.94■■■□□ 2.06
TMEM143-208ENST00000598258 FANCD2Q9BXW9 1451 aa27.9■■■□□ 2.06
TMEM143-208ENST00000598258 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
TMEM143-208ENST00000598258 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.05
TMEM143-208ENST00000598258 SUPT5HO00267 1087 aaKnown RBP27.81■■■□□ 2.04
TMEM143-208ENST00000598258 WDR62O43379 1518 aa27.8■■■□□ 2.04
TMEM143-208ENST00000598258 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
TMEM143-208ENST00000598258 TOPBP1Q92547 1522 aa27.49■■□□□ 1.99
TMEM143-208ENST00000598258 DNMBPQ6XZF7 1577 aa27.43■■□□□ 1.98
TMEM143-208ENST00000598258 CUX1P39880 1505 aa27.31■■□□□ 1.96
TMEM143-208ENST00000598258 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
TMEM143-208ENST00000598258 ZNF608Q9ULD9 1512 aaPredicted RBP27.28■■□□□ 1.96
TMEM143-208ENST00000598258 TARBP1Q13395 1621 aaKnown RBP27.26■■□□□ 1.95
TMEM143-208ENST00000598258 DNAJC5Q9H3Z4 198 aa27.25■■□□□ 1.95
TMEM143-208ENST00000598258 POLA1P09884 1462 aaPredicted RBP27.25■■□□□ 1.95
TMEM143-208ENST00000598258 IFT140Q96RY7 1462 aa27.24■■□□□ 1.95
TMEM143-208ENST00000598258 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
TMEM143-208ENST00000598258 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
TMEM143-208ENST00000598258 EIF4G3O43432 1585 aaKnown RBP27.15■■□□□ 1.94
TMEM143-208ENST00000598258 SYNJ1O43426 1573 aa27.07■■□□□ 1.92
TMEM143-208ENST00000598258 WDR97A6NE52 1622 aa27.06■■□□□ 1.92
TMEM143-208ENST00000598258 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.92
TMEM143-208ENST00000598258 SOGA1O94964 1423 aa27.05■■□□□ 1.92
TMEM143-208ENST00000598258 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
TMEM143-208ENST00000598258 TOP2BQ02880 1626 aa27■■□□□ 1.91
TMEM143-208ENST00000598258 WRNQ14191 1432 aaPredicted RBP eCLIP26.98■■□□□ 1.91
TMEM143-208ENST00000598258 TDRD9Q8NDG6 1382 aaKnown RBP26.97■■□□□ 1.91
TMEM143-208ENST00000598258 CHD1O14646 1710 aa26.88■■□□□ 1.89
TMEM143-208ENST00000598258 ABCA10Q8WWZ4 1543 aa26.87■■□□□ 1.89
TMEM143-208ENST00000598258 ABCA5Q8WWZ7 1642 aa26.85■■□□□ 1.89
TMEM143-208ENST00000598258 PBRM1Q86U86 1689 aa26.84■■□□□ 1.89
TMEM143-208ENST00000598258 SNAPC4Q5SXM2 1469 aa26.8■■□□□ 1.88
TMEM143-208ENST00000598258 GAPVD1Q14C86 1478 aa26.75■■□□□ 1.87
TMEM143-208ENST00000598258 OSCARQ8IYS5 282 aa26.75■■□□□ 1.87
TMEM143-208ENST00000598258 GRIN2BQ13224 1484 aa26.74■■□□□ 1.87
TMEM143-208ENST00000598258 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
TMEM143-208ENST00000598258 FBLN2P98095 1184 aa26.61■■□□□ 1.85
TMEM143-208ENST00000598258 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
TMEM143-208ENST00000598258 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
TMEM143-208ENST00000598258 RIMBP3CA6NJZ7 1639 aa26.55■■□□□ 1.84
TMEM143-208ENST00000598258 RIMBP3BA6NNM3 1639 aa26.55■■□□□ 1.84
TMEM143-208ENST00000598258 RIMBP3Q9UFD9 1639 aa26.55■■□□□ 1.84
TMEM143-208ENST00000598258 CLASP1Q7Z460 1538 aa26.53■■□□□ 1.84
TMEM143-208ENST00000598258 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
TMEM143-208ENST00000598258 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
TMEM143-208ENST00000598258 ARHGEF11O15085 1522 aa26.48■■□□□ 1.83
TMEM143-208ENST00000598258 GRIN2AQ12879 1464 aa26.45■■□□□ 1.82
TMEM143-208ENST00000598258 CEP170Q5SW79 1584 aa26.42■■□□□ 1.82
TMEM143-208ENST00000598258 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
TMEM143-208ENST00000598258 IGF1RP08069 1367 aa26.35■■□□□ 1.81
TMEM143-208ENST00000598258 KIF27Q86VH2 1401 aa26.35■■□□□ 1.81
TMEM143-208ENST00000598258 NUP160Q12769 1436 aa26.34■■□□□ 1.81
TMEM143-208ENST00000598258 RUSC2Q8N2Y8 1516 aa26.34■■□□□ 1.81
TMEM143-208ENST00000598258 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
TMEM143-208ENST00000598258 ARAP1Q96P48 1450 aa26.3■■□□□ 1.8
TMEM143-208ENST00000598258 CUL7Q14999 1698 aa26.28■■□□□ 1.8
TMEM143-208ENST00000598258 ERCC6L2Q5T890 1561 aa26.26■■□□□ 1.79
TMEM143-208ENST00000598258 SHROOM2Q13796 1616 aa26.23■■□□□ 1.79
TMEM143-208ENST00000598258 CYB5RLQ6IPT4 315 aa26.15■■□□□ 1.78
TMEM143-208ENST00000598258 CARMIL1Q5VZK9 1371 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms