RNA–Protein interactions for RNA: ENST00000598230.5

SH3GL1-205, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 5

Gene SH3GL1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-205ENST00000598230 NISCHQ9Y2I1 1504 aa45.42■■■■■ 4.86
SH3GL1-205ENST00000598230 CCDC180Q9P1Z9 1646 aa40.39■■■■■ 4.06
SH3GL1-205ENST00000598230 ABCC9O60706 1549 aa40.03■■■■■ 4
SH3GL1-205ENST00000598230 DCAF8L2P0C7V8 631 aa38.37■■■■□ 3.73
SH3GL1-205ENST00000598230 RB1CC1Q8TDY2 1594 aa38.26■■■■□ 3.72
SH3GL1-205ENST00000598230 NACADO15069 1562 aa38.12■■■■□ 3.69
SH3GL1-205ENST00000598230 ZCCHC6Q5VYS8 1495 aaKnown RBP37.75■■■■□ 3.63
SH3GL1-205ENST00000598230 MYO15BQ96JP2 1530 aa37.73■■■■□ 3.63
SH3GL1-205ENST00000598230 DCAF1Q9Y4B6 1507 aa37.48■■■■□ 3.59
SH3GL1-205ENST00000598230 PABPN1Q86U42 306 aaKnown RBP eCLIP37.45■■■■□ 3.59
SH3GL1-205ENST00000598230 UNC13AQ9UPW8 1703 aa37.29■■■■□ 3.56
SH3GL1-205ENST00000598230 BICRAQ9NZM4 1560 aa37.08■■■■□ 3.53
SH3GL1-205ENST00000598230 DNAJC5BQ9UF47 199 aa37.04■■■■□ 3.52
SH3GL1-205ENST00000598230 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
SH3GL1-205ENST00000598230 SHROOM4Q9ULL8 1493 aa36.6■■■■□ 3.45
SH3GL1-205ENST00000598230 EIF4G1Q04637 1599 aaKnown RBP36.16■■■■□ 3.38
SH3GL1-205ENST00000598230 CC2D2AQ9P2K1 1620 aa36.1■■■■□ 3.37
SH3GL1-205ENST00000598230 CECR2Q9BXF3 1484 aa35.97■■■■□ 3.35
SH3GL1-205ENST00000598230 SMARCA4P51532 1647 aa35.28■■■■□ 3.24
SH3GL1-205ENST00000598230 NCAPD3P42695 1498 aa35.22■■■■□ 3.23
SH3GL1-205ENST00000598230 ATAD2BQ9ULI0 1458 aa35.22■■■■□ 3.23
SH3GL1-205ENST00000598230 BAZ1AQ9NRL2 1556 aaPredicted RBP35.21■■■■□ 3.23
SH3GL1-205ENST00000598230 SMARCA2P51531 1590 aa35.12■■■■□ 3.21
SH3GL1-205ENST00000598230 MROH2BQ7Z745 1585 aa35.04■■■■□ 3.2
SH3GL1-205ENST00000598230 HMGXB3Q12766 1538 aa34.96■■■■□ 3.19
SH3GL1-205ENST00000598230 BAZ1BQ9UIG0 1483 aaKnown RBP34.93■■■■□ 3.18
SH3GL1-205ENST00000598230 PEG3Q9GZU2 1588 aa34.87■■■■□ 3.17
SH3GL1-205ENST00000598230 WIZO95785 1651 aa34.63■■■■□ 3.13
SH3GL1-205ENST00000598230 RSF1Q96T23 1441 aaPredicted RBP34.55■■■■□ 3.12
SH3GL1-205ENST00000598230 ERCC6Q03468 1493 aa34.53■■■■□ 3.12
SH3GL1-205ENST00000598230 NESP48681 1621 aa34.53■■■■□ 3.12
SH3GL1-205ENST00000598230 LAMC3Q9Y6N6 1575 aa34.3■■■■□ 3.08
SH3GL1-205ENST00000598230 CADPSQ9ULU8 1353 aa34.23■■■■□ 3.07
SH3GL1-205ENST00000598230 TOP2AP11388 1531 aaKnown RBP34.21■■■■□ 3.07
SH3GL1-205ENST00000598230 CUX2O14529 1486 aa34.16■■■■□ 3.06
SH3GL1-205ENST00000598230 PDS5BQ9NTI5 1447 aa34.16■■■■□ 3.06
SH3GL1-205ENST00000598230 KIF21AQ7Z4S6 1674 aa34.01■■■■□ 3.04
SH3GL1-205ENST00000598230 THOC2Q8NI27 1593 aaKnown RBP33.95■■■■□ 3.03
SH3GL1-205ENST00000598230 CFTRP13569 1480 aa33.92■■■■□ 3.02
SH3GL1-205ENST00000598230 CCDC88BA6NC98 1476 aa33.88■■■■□ 3.01
SH3GL1-205ENST00000598230 FANCD2Q9BXW9 1451 aa33.83■■■■□ 3.01
SH3GL1-205ENST00000598230 MRC2Q9UBG0 1479 aa33.81■■■■□ 3
SH3GL1-205ENST00000598230 CEP164Q9UPV0 1460 aa33.81■■■■□ 3
SH3GL1-205ENST00000598230 WDR62O43379 1518 aa33.65■■■□□ 2.98
SH3GL1-205ENST00000598230 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
SH3GL1-205ENST00000598230 DNAJC5Q9H3Z4 198 aa33.56■■■□□ 2.96
SH3GL1-205ENST00000598230 URB2Q14146 1524 aaKnown RBP33.48■■■□□ 2.95
SH3GL1-205ENST00000598230 PRDM2Q13029 1718 aa33.48■■■□□ 2.95
SH3GL1-205ENST00000598230 TOPBP1Q92547 1522 aa33.23■■■□□ 2.91
SH3GL1-205ENST00000598230 ABCC8Q09428 1581 aa33.18■■■□□ 2.9
SH3GL1-205ENST00000598230 DNMBPQ6XZF7 1577 aa33.13■■■□□ 2.89
SH3GL1-205ENST00000598230 IFT140Q96RY7 1462 aa33.1■■■□□ 2.89
SH3GL1-205ENST00000598230 ZNF608Q9ULD9 1512 aaPredicted RBP33.02■■■□□ 2.88
SH3GL1-205ENST00000598230 POLA1P09884 1462 aaPredicted RBP32.94■■■□□ 2.86
SH3GL1-205ENST00000598230 CUX1P39880 1505 aa32.87■■■□□ 2.85
SH3GL1-205ENST00000598230 RAD54L2Q9Y4B4 1467 aa32.86■■■□□ 2.85
SH3GL1-205ENST00000598230 SOGA1O94964 1423 aa32.85■■■□□ 2.85
SH3GL1-205ENST00000598230 TARBP1Q13395 1621 aaKnown RBP32.84■■■□□ 2.85
SH3GL1-205ENST00000598230 AQRO60306 1485 aaKnown RBP eCLIP32.83■■■□□ 2.852e-7■■■■■ 27.8
SH3GL1-205ENST00000598230 FGD5Q6ZNL6 1462 aa32.83■■■□□ 2.85
SH3GL1-205ENST00000598230 OSCARQ8IYS5 282 aa32.83■■■□□ 2.85
SH3GL1-205ENST00000598230 EIF4G3O43432 1585 aaKnown RBP32.79■■■□□ 2.84
SH3GL1-205ENST00000598230 TDRD9Q8NDG6 1382 aaKnown RBP32.75■■■□□ 2.83
SH3GL1-205ENST00000598230 FBLN2P98095 1184 aa32.62■■■□□ 2.81
SH3GL1-205ENST00000598230 WRNQ14191 1432 aaPredicted RBP eCLIP32.6■■■□□ 2.81
SH3GL1-205ENST00000598230 WDR97A6NE52 1622 aa32.49■■■□□ 2.79
SH3GL1-205ENST00000598230 SYNJ1O43426 1573 aa32.48■■■□□ 2.79
SH3GL1-205ENST00000598230 SNAPC4Q5SXM2 1469 aa32.48■■■□□ 2.79
SH3GL1-205ENST00000598230 TRIM41Q8WV44 630 aa32.47■■■□□ 2.79
SH3GL1-205ENST00000598230 TOP2BQ02880 1626 aa32.47■■■□□ 2.79
SH3GL1-205ENST00000598230 GRIN2BQ13224 1484 aa32.46■■■□□ 2.79
SH3GL1-205ENST00000598230 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
SH3GL1-205ENST00000598230 GAPVD1Q14C86 1478 aa32.44■■■□□ 2.78
SH3GL1-205ENST00000598230 BIVM-ERCC5R4GMW8 1640 aa32.43■■■□□ 2.78
SH3GL1-205ENST00000598230 CHMP7Q8WUX9 453 aaPredicted RBP32.42■■■□□ 2.78
SH3GL1-205ENST00000598230 CHD1O14646 1710 aa32.41■■■□□ 2.78
SH3GL1-205ENST00000598230 MAGI1Q96QZ7 1491 aaPredicted RBP32.36■■■□□ 2.77
SH3GL1-205ENST00000598230 ABCA5Q8WWZ7 1642 aa32.3■■■□□ 2.76
SH3GL1-205ENST00000598230 PBRM1Q86U86 1689 aa32.28■■■□□ 2.76
SH3GL1-205ENST00000598230 SYNJ2O15056 1496 aa32.27■■■□□ 2.76
SH3GL1-205ENST00000598230 RIMBP3CA6NJZ7 1639 aa32.22■■■□□ 2.75
SH3GL1-205ENST00000598230 RIMBP3BA6NNM3 1639 aa32.22■■■□□ 2.75
SH3GL1-205ENST00000598230 RIMBP3Q9UFD9 1639 aa32.22■■■□□ 2.75
SH3GL1-205ENST00000598230 ARHGEF11O15085 1522 aa32.21■■■□□ 2.75
SH3GL1-205ENST00000598230 CYB5RLQ6IPT4 315 aa32.08■■■□□ 2.73
SH3GL1-205ENST00000598230 CLASP1Q7Z460 1538 aa32.06■■■□□ 2.72
SH3GL1-205ENST00000598230 ERICH3Q5RHP9 1530 aa32.05■■■□□ 2.72
SH3GL1-205ENST00000598230 ADAMTS12P58397 1594 aa32.04■■■□□ 2.72
SH3GL1-205ENST00000598230 FHAD1B1AJZ9 1412 aa32.04■■■□□ 2.72
SH3GL1-205ENST00000598230 GRIN2AQ12879 1464 aa32.03■■■□□ 2.72
SH3GL1-205ENST00000598230 KIF27Q86VH2 1401 aa31.94■■■□□ 2.7
SH3GL1-205ENST00000598230 ARAP1Q96P48 1450 aa31.93■■■□□ 2.7
SH3GL1-205ENST00000598230 NUP160Q12769 1436 aa31.88■■■□□ 2.69
SH3GL1-205ENST00000598230 CEP170Q5SW79 1584 aa31.86■■■□□ 2.69
SH3GL1-205ENST00000598230 IGF1RP08069 1367 aa31.86■■■□□ 2.69
SH3GL1-205ENST00000598230 CARMIL1Q5VZK9 1371 aa31.68■■■□□ 2.66
SH3GL1-205ENST00000598230 CUL7Q14999 1698 aa31.67■■■□□ 2.66
SH3GL1-205ENST00000598230 JPH4Q96JJ6 628 aa31.67■■■□□ 2.66
SH3GL1-205ENST00000598230 ERCC6L2Q5T890 1561 aa31.67■■■□□ 2.66
SH3GL1-205ENST00000598230 SHROOM2Q13796 1616 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms