RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
LTBP4-221ENST00000598178 ABCC9O60706 1549 aa28.45■■■□□ 2.15
LTBP4-221ENST00000598178 CCDC180Q9P1Z9 1646 aa28.16■■■□□ 2.1
LTBP4-221ENST00000598178 DNAJC5BQ9UF47 199 aa27.13■■□□□ 1.93
LTBP4-221ENST00000598178 RB1CC1Q8TDY2 1594 aa26.99■■□□□ 1.91
LTBP4-221ENST00000598178 NACADO15069 1562 aa26.72■■□□□ 1.87
LTBP4-221ENST00000598178 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
LTBP4-221ENST00000598178 UNC13AQ9UPW8 1703 aa26.38■■□□□ 1.81
LTBP4-221ENST00000598178 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
LTBP4-221ENST00000598178 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
LTBP4-221ENST00000598178 BICRAQ9NZM4 1560 aa26.22■■□□□ 1.79
LTBP4-221ENST00000598178 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
LTBP4-221ENST00000598178 CC2D2AQ9P2K1 1620 aa25.75■■□□□ 1.71
LTBP4-221ENST00000598178 DCAF1Q9Y4B6 1507 aa25.74■■□□□ 1.71
LTBP4-221ENST00000598178 CECR2Q9BXF3 1484 aa25.73■■□□□ 1.71
LTBP4-221ENST00000598178 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
LTBP4-221ENST00000598178 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
LTBP4-221ENST00000598178 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
LTBP4-221ENST00000598178 DNAJC5Q9H3Z4 198 aa25.33■■□□□ 1.65
LTBP4-221ENST00000598178 CUX2O14529 1486 aa24.84■■□□□ 1.57
LTBP4-221ENST00000598178 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
LTBP4-221ENST00000598178 ERCC6Q03468 1493 aa24.62■■□□□ 1.53
LTBP4-221ENST00000598178 ATAD2BQ9ULI0 1458 aa24.48■■□□□ 1.51
LTBP4-221ENST00000598178 HMGXB3Q12766 1538 aa24.45■■□□□ 1.5
LTBP4-221ENST00000598178 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
LTBP4-221ENST00000598178 SMARCA4P51532 1647 aa24.34■■□□□ 1.49
LTBP4-221ENST00000598178 NESP48681 1621 aa24.32■■□□□ 1.48
LTBP4-221ENST00000598178 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
LTBP4-221ENST00000598178 BAZ1BQ9UIG0 1483 aaKnown RBP24.19■■□□□ 1.46
LTBP4-221ENST00000598178 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
LTBP4-221ENST00000598178 LAMC3Q9Y6N6 1575 aa24.19■■□□□ 1.46
LTBP4-221ENST00000598178 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
LTBP4-221ENST00000598178 KIF21AQ7Z4S6 1674 aa24.04■■□□□ 1.44
LTBP4-221ENST00000598178 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
LTBP4-221ENST00000598178 MROH2BQ7Z745 1585 aa23.9■■□□□ 1.42
LTBP4-221ENST00000598178 TRIM41Q8WV44 630 aa23.87■■□□□ 1.41
LTBP4-221ENST00000598178 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
LTBP4-221ENST00000598178 MRC2Q9UBG0 1479 aa23.83■■□□□ 1.41
LTBP4-221ENST00000598178 WDR62O43379 1518 aa23.83■■□□□ 1.41
LTBP4-221ENST00000598178 CEP164Q9UPV0 1460 aa23.63■■□□□ 1.37
LTBP4-221ENST00000598178 WIZO95785 1651 aa23.58■■□□□ 1.37
LTBP4-221ENST00000598178 OSCARQ8IYS5 282 aa23.57■■□□□ 1.36
LTBP4-221ENST00000598178 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
LTBP4-221ENST00000598178 CFTRP13569 1480 aa23.51■■□□□ 1.35
LTBP4-221ENST00000598178 URB2Q14146 1524 aaKnown RBP23.39■■□□□ 1.34
LTBP4-221ENST00000598178 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
LTBP4-221ENST00000598178 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
LTBP4-221ENST00000598178 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
LTBP4-221ENST00000598178 RSF1Q96T23 1441 aaPredicted RBP23.3■■□□□ 1.32
LTBP4-221ENST00000598178 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
LTBP4-221ENST00000598178 PRDM2Q13029 1718 aa23.27■■□□□ 1.32
LTBP4-221ENST00000598178 ARHGEF11O15085 1522 aa23.2■■□□□ 1.3
LTBP4-221ENST00000598178 IFT140Q96RY7 1462 aa23.2■■□□□ 1.3
LTBP4-221ENST00000598178 ZNF608Q9ULD9 1512 aaPredicted RBP23.16■■□□□ 1.3
LTBP4-221ENST00000598178 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
LTBP4-221ENST00000598178 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
LTBP4-221ENST00000598178 EIF4G3O43432 1585 aaKnown RBP23.04■■□□□ 1.28
LTBP4-221ENST00000598178 CCDC88BA6NC98 1476 aa23■■□□□ 1.27
LTBP4-221ENST00000598178 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
LTBP4-221ENST00000598178 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
LTBP4-221ENST00000598178 CHD1O14646 1710 aa22.95■■□□□ 1.26
LTBP4-221ENST00000598178 TARBP1Q13395 1621 aaKnown RBP22.94■■□□□ 1.26
LTBP4-221ENST00000598178 ARAP1Q96P48 1450 aa22.92■■□□□ 1.26
LTBP4-221ENST00000598178 AQRO60306 1485 aaKnown RBP eCLIP22.87■■□□□ 1.255e-6■■□□□ 14.3
LTBP4-221ENST00000598178 TRHP20396 242 aaPredicted RBP22.85■■□□□ 1.25
LTBP4-221ENST00000598178 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
LTBP4-221ENST00000598178 FBLN2P98095 1184 aa22.75■■□□□ 1.23
LTBP4-221ENST00000598178 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
LTBP4-221ENST00000598178 CLASP1Q7Z460 1538 aa22.72■■□□□ 1.23
LTBP4-221ENST00000598178 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
LTBP4-221ENST00000598178 SOGA1O94964 1423 aa22.67■■□□□ 1.22
LTBP4-221ENST00000598178 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
LTBP4-221ENST00000598178 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
LTBP4-221ENST00000598178 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.21
LTBP4-221ENST00000598178 MAGI1Q96QZ7 1491 aaPredicted RBP22.63■■□□□ 1.21
LTBP4-221ENST00000598178 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
LTBP4-221ENST00000598178 FGD5Q6ZNL6 1462 aa22.57■■□□□ 1.2
LTBP4-221ENST00000598178 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
LTBP4-221ENST00000598178 GRIN2BQ13224 1484 aa22.55■■□□□ 1.2
LTBP4-221ENST00000598178 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
LTBP4-221ENST00000598178 CUX1P39880 1505 aa22.48■■□□□ 1.19
LTBP4-221ENST00000598178 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
LTBP4-221ENST00000598178 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
LTBP4-221ENST00000598178 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
LTBP4-221ENST00000598178 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
LTBP4-221ENST00000598178 ABCA10Q8WWZ4 1543 aa22.33■■□□□ 1.17
LTBP4-221ENST00000598178 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
LTBP4-221ENST00000598178 ERCC6L2Q5T890 1561 aa22.25■■□□□ 1.15
LTBP4-221ENST00000598178 NUP160Q12769 1436 aa22.23■■□□□ 1.15
LTBP4-221ENST00000598178 CEP170Q5SW79 1584 aa22.22■■□□□ 1.15
LTBP4-221ENST00000598178 SHROOM2Q13796 1616 aa22.21■■□□□ 1.15
LTBP4-221ENST00000598178 ADAMTS12P58397 1594 aa22.18■■□□□ 1.14
LTBP4-221ENST00000598178 KIF13AQ9H1H9 1805 aa22.16■■□□□ 1.14
LTBP4-221ENST00000598178 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.13
LTBP4-221ENST00000598178 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
LTBP4-221ENST00000598178 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
LTBP4-221ENST00000598178 BIVM-ERCC5R4GMW8 1640 aa22.07■■□□□ 1.12
LTBP4-221ENST00000598178 TOP2BQ02880 1626 aa22.06■■□□□ 1.12
LTBP4-221ENST00000598178 PRG4Q92954 1404 aaPredicted RBP21.99■■□□□ 1.11
LTBP4-221ENST00000598178 ABCC10Q5T3U5 1492 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms