RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 NISCHQ9Y2I1 1504 aa30.13■■■□□ 2.41
PDE4C-213ENST00000598111 CCDC180Q9P1Z9 1646 aa26.95■■□□□ 1.91
PDE4C-213ENST00000598111 ABCC9O60706 1549 aa26.35■■□□□ 1.81
PDE4C-213ENST00000598111 RB1CC1Q8TDY2 1594 aa25.37■■□□□ 1.65
PDE4C-213ENST00000598111 NACADO15069 1562 aa25.29■■□□□ 1.64
PDE4C-213ENST00000598111 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
PDE4C-213ENST00000598111 ZCCHC6Q5VYS8 1495 aaKnown RBP25.1■■□□□ 1.61
PDE4C-213ENST00000598111 MYO15BQ96JP2 1530 aa25.07■■□□□ 1.6
PDE4C-213ENST00000598111 DCAF1Q9Y4B6 1507 aa24.93■■□□□ 1.58
PDE4C-213ENST00000598111 UNC13AQ9UPW8 1703 aa24.84■■□□□ 1.57
PDE4C-213ENST00000598111 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
PDE4C-213ENST00000598111 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
PDE4C-213ENST00000598111 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
PDE4C-213ENST00000598111 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
PDE4C-213ENST00000598111 DNAJC5BQ9UF47 199 aa24.13■■□□□ 1.45
PDE4C-213ENST00000598111 EIF4G1Q04637 1599 aaKnown RBP23.93■■□□□ 1.42
PDE4C-213ENST00000598111 CC2D2AQ9P2K1 1620 aa23.87■■□□□ 1.41
PDE4C-213ENST00000598111 CECR2Q9BXF3 1484 aa23.69■■□□□ 1.38
PDE4C-213ENST00000598111 SMARCA4P51532 1647 aa23.45■■□□□ 1.34
PDE4C-213ENST00000598111 BAZ1AQ9NRL2 1556 aaPredicted RBP23.4■■□□□ 1.34
PDE4C-213ENST00000598111 SMARCA2P51531 1590 aa23.32■■□□□ 1.32
PDE4C-213ENST00000598111 ATAD2BQ9ULI0 1458 aa23.28■■□□□ 1.32
PDE4C-213ENST00000598111 NCAPD3P42695 1498 aa23.26■■□□□ 1.31
PDE4C-213ENST00000598111 HMGXB3Q12766 1538 aa23.23■■□□□ 1.31
PDE4C-213ENST00000598111 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
PDE4C-213ENST00000598111 PEG3Q9GZU2 1588 aa23.2■■□□□ 1.3
PDE4C-213ENST00000598111 BAZ1BQ9UIG0 1483 aaKnown RBP23.14■■□□□ 1.29
PDE4C-213ENST00000598111 WIZO95785 1651 aa23■■□□□ 1.27
PDE4C-213ENST00000598111 RSF1Q96T23 1441 aaPredicted RBP22.87■■□□□ 1.25
PDE4C-213ENST00000598111 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
PDE4C-213ENST00000598111 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
PDE4C-213ENST00000598111 NESP48681 1621 aa22.76■■□□□ 1.23
PDE4C-213ENST00000598111 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
PDE4C-213ENST00000598111 KIF21AQ7Z4S6 1674 aa22.59■■□□□ 1.21
PDE4C-213ENST00000598111 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
PDE4C-213ENST00000598111 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
PDE4C-213ENST00000598111 CUX2O14529 1486 aa22.54■■□□□ 1.2
PDE4C-213ENST00000598111 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
PDE4C-213ENST00000598111 PRDM2Q13029 1718 aa22.45■■□□□ 1.19
PDE4C-213ENST00000598111 CFTRP13569 1480 aa22.44■■□□□ 1.18
PDE4C-213ENST00000598111 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
PDE4C-213ENST00000598111 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
PDE4C-213ENST00000598111 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
PDE4C-213ENST00000598111 MRC2Q9UBG0 1479 aa22.36■■□□□ 1.17
PDE4C-213ENST00000598111 WDR62O43379 1518 aa22.3■■□□□ 1.16
PDE4C-213ENST00000598111 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
PDE4C-213ENST00000598111 URB2Q14146 1524 aaKnown RBP22.14■■□□□ 1.13
PDE4C-213ENST00000598111 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
PDE4C-213ENST00000598111 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
PDE4C-213ENST00000598111 ABCC8Q09428 1581 aa22■■□□□ 1.11
PDE4C-213ENST00000598111 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
PDE4C-213ENST00000598111 DNAJC5Q9H3Z4 198 aa21.84■■□□□ 1.09
PDE4C-213ENST00000598111 POLA1P09884 1462 aaPredicted RBP21.81■■□□□ 1.08
PDE4C-213ENST00000598111 CUX1P39880 1505 aa21.8■■□□□ 1.08
PDE4C-213ENST00000598111 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
PDE4C-213ENST00000598111 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
PDE4C-213ENST00000598111 ZNF608Q9ULD9 1512 aaPredicted RBP21.77■■□□□ 1.08
PDE4C-213ENST00000598111 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
PDE4C-213ENST00000598111 SOGA1O94964 1423 aa21.68■■□□□ 1.06
PDE4C-213ENST00000598111 RAD54L2Q9Y4B4 1467 aa21.68■■□□□ 1.06
PDE4C-213ENST00000598111 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
PDE4C-213ENST00000598111 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
PDE4C-213ENST00000598111 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
PDE4C-213ENST00000598111 TOP2BQ02880 1626 aa21.62■■□□□ 1.05
PDE4C-213ENST00000598111 AQRO60306 1485 aaKnown RBP eCLIP21.61■■□□□ 1.053e-6■■■■□ 24.7
PDE4C-213ENST00000598111 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
PDE4C-213ENST00000598111 CHD1O14646 1710 aa21.55■■□□□ 1.04
PDE4C-213ENST00000598111 TDRD9Q8NDG6 1382 aaKnown RBP21.55■■□□□ 1.04
PDE4C-213ENST00000598111 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
PDE4C-213ENST00000598111 ABCA10Q8WWZ4 1543 aa21.53■■□□□ 1.04
PDE4C-213ENST00000598111 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
PDE4C-213ENST00000598111 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
PDE4C-213ENST00000598111 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
PDE4C-213ENST00000598111 SNAPC4Q5SXM2 1469 aa21.48■■□□□ 1.03
PDE4C-213ENST00000598111 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.03
PDE4C-213ENST00000598111 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.03
PDE4C-213ENST00000598111 FBLN2P98095 1184 aa21.38■■□□□ 1.01
PDE4C-213ENST00000598111 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
PDE4C-213ENST00000598111 ADAMTS12P58397 1594 aa21.31■■□□□ 1
PDE4C-213ENST00000598111 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
PDE4C-213ENST00000598111 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
PDE4C-213ENST00000598111 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
PDE4C-213ENST00000598111 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
PDE4C-213ENST00000598111 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
PDE4C-213ENST00000598111 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
PDE4C-213ENST00000598111 CLASP1Q7Z460 1538 aa21.24■□□□□ 0.99
PDE4C-213ENST00000598111 GRIN2AQ12879 1464 aa21.21■□□□□ 0.99
PDE4C-213ENST00000598111 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
PDE4C-213ENST00000598111 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
PDE4C-213ENST00000598111 TRIM41Q8WV44 630 aa21.15■□□□□ 0.98
PDE4C-213ENST00000598111 CUL7Q14999 1698 aa21.15■□□□□ 0.98
PDE4C-213ENST00000598111 CEP170Q5SW79 1584 aa21.13■□□□□ 0.97
PDE4C-213ENST00000598111 NUP160Q12769 1436 aa21.09■□□□□ 0.97
PDE4C-213ENST00000598111 ARAP1Q96P48 1450 aa21.06■□□□□ 0.96
PDE4C-213ENST00000598111 IGF1RP08069 1367 aa21.01■□□□□ 0.95
PDE4C-213ENST00000598111 RUSC2Q8N2Y8 1516 aa21.01■□□□□ 0.95
PDE4C-213ENST00000598111 SHROOM2Q13796 1616 aa21■□□□□ 0.95
PDE4C-213ENST00000598111 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
PDE4C-213ENST00000598111 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
PDE4C-213ENST00000598111 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms