RNA–Protein interactions for RNA: ENST00000598074.1

STRN4-216, Transcript of striatin 4, humanhuman

TSL 4

Gene STRN4, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-216ENST00000598074 NISCHQ9Y2I1 1504 aa32.03■■■□□ 2.72
STRN4-216ENST00000598074 ABCC9O60706 1549 aa29.78■■■□□ 2.36
STRN4-216ENST00000598074 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
STRN4-216ENST00000598074 DNAJC5BQ9UF47 199 aa28.59■■■□□ 2.17
STRN4-216ENST00000598074 RB1CC1Q8TDY2 1594 aa28■■■□□ 2.07
STRN4-216ENST00000598074 NACADO15069 1562 aa27.62■■■□□ 2.01
STRN4-216ENST00000598074 PABPN1Q86U42 306 aaKnown RBP eCLIP27.61■■■□□ 2.01
STRN4-216ENST00000598074 UNC13AQ9UPW8 1703 aa27.43■■□□□ 1.98
STRN4-216ENST00000598074 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
STRN4-216ENST00000598074 BICRAQ9NZM4 1560 aa27.25■■□□□ 1.95
STRN4-216ENST00000598074 MYO15BQ96JP2 1530 aa26.98■■□□□ 1.91
STRN4-216ENST00000598074 CECR2Q9BXF3 1484 aa26.89■■□□□ 1.9
STRN4-216ENST00000598074 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
STRN4-216ENST00000598074 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
STRN4-216ENST00000598074 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
STRN4-216ENST00000598074 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
STRN4-216ENST00000598074 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
STRN4-216ENST00000598074 ZCCHC6Q5VYS8 1495 aaKnown RBP26.4■■□□□ 1.82
STRN4-216ENST00000598074 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.81
STRN4-216ENST00000598074 CUX2O14529 1486 aa25.91■■□□□ 1.74
STRN4-216ENST00000598074 ERCC6Q03468 1493 aa25.74■■□□□ 1.71
STRN4-216ENST00000598074 NCAPD3P42695 1498 aa25.51■■□□□ 1.67
STRN4-216ENST00000598074 NESP48681 1621 aa25.4■■□□□ 1.66
STRN4-216ENST00000598074 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
STRN4-216ENST00000598074 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
STRN4-216ENST00000598074 THOC2Q8NI27 1593 aaKnown RBP25.28■■□□□ 1.64
STRN4-216ENST00000598074 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
STRN4-216ENST00000598074 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
STRN4-216ENST00000598074 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
STRN4-216ENST00000598074 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
STRN4-216ENST00000598074 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
STRN4-216ENST00000598074 KIF21AQ7Z4S6 1674 aa25.05■■□□□ 1.6
STRN4-216ENST00000598074 PDS5BQ9NTI5 1447 aa24.92■■□□□ 1.58
STRN4-216ENST00000598074 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
STRN4-216ENST00000598074 BAZ1AQ9NRL2 1556 aaPredicted RBP24.9■■□□□ 1.58
STRN4-216ENST00000598074 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
STRN4-216ENST00000598074 WDR62O43379 1518 aa24.75■■□□□ 1.55
STRN4-216ENST00000598074 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.55
STRN4-216ENST00000598074 MROH2BQ7Z745 1585 aa24.7■■□□□ 1.54
STRN4-216ENST00000598074 OSCARQ8IYS5 282 aa24.6■■□□□ 1.53
STRN4-216ENST00000598074 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
STRN4-216ENST00000598074 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
STRN4-216ENST00000598074 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
STRN4-216ENST00000598074 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
STRN4-216ENST00000598074 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
STRN4-216ENST00000598074 WIZO95785 1651 aa24.38■■□□□ 1.49
STRN4-216ENST00000598074 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
STRN4-216ENST00000598074 CFTRP13569 1480 aa24.28■■□□□ 1.48
STRN4-216ENST00000598074 ARHGEF11O15085 1522 aa24.26■■□□□ 1.47
STRN4-216ENST00000598074 ZNF608Q9ULD9 1512 aaPredicted RBP24.14■■□□□ 1.45
STRN4-216ENST00000598074 CYB5RLQ6IPT4 315 aa24.11■■□□□ 1.45
STRN4-216ENST00000598074 TRHP20396 242 aaPredicted RBP24.07■■□□□ 1.44
STRN4-216ENST00000598074 IFT140Q96RY7 1462 aa24.05■■□□□ 1.44
STRN4-216ENST00000598074 PRDM2Q13029 1718 aa24.01■■□□□ 1.43
STRN4-216ENST00000598074 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
STRN4-216ENST00000598074 RSF1Q96T23 1441 aaPredicted RBP23.99■■□□□ 1.43
STRN4-216ENST00000598074 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
STRN4-216ENST00000598074 ARAP1Q96P48 1450 aa23.98■■□□□ 1.43
STRN4-216ENST00000598074 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
STRN4-216ENST00000598074 CHD1O14646 1710 aa23.93■■□□□ 1.42
STRN4-216ENST00000598074 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
STRN4-216ENST00000598074 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
STRN4-216ENST00000598074 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.43e-7■■■■□ 24.1
STRN4-216ENST00000598074 FBLN2P98095 1184 aa23.78■■□□□ 1.4
STRN4-216ENST00000598074 TARBP1Q13395 1621 aaKnown RBP23.76■■□□□ 1.39
STRN4-216ENST00000598074 ABCC8Q09428 1581 aa23.75■■□□□ 1.39
STRN4-216ENST00000598074 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
STRN4-216ENST00000598074 CCDC88BA6NC98 1476 aa23.73■■□□□ 1.39
STRN4-216ENST00000598074 CLASP1Q7Z460 1538 aa23.62■■□□□ 1.37
STRN4-216ENST00000598074 POLA1P09884 1462 aaPredicted RBP23.62■■□□□ 1.37
STRN4-216ENST00000598074 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
STRN4-216ENST00000598074 SNAPC4Q5SXM2 1469 aa23.55■■□□□ 1.36
STRN4-216ENST00000598074 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
STRN4-216ENST00000598074 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
STRN4-216ENST00000598074 SOGA1O94964 1423 aa23.47■■□□□ 1.35
STRN4-216ENST00000598074 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
STRN4-216ENST00000598074 WDR97A6NE52 1622 aa23.42■■□□□ 1.34
STRN4-216ENST00000598074 MAGI1Q96QZ7 1491 aaPredicted RBP23.42■■□□□ 1.34
STRN4-216ENST00000598074 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
STRN4-216ENST00000598074 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
STRN4-216ENST00000598074 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
STRN4-216ENST00000598074 GRIN2BQ13224 1484 aa23.35■■□□□ 1.33
STRN4-216ENST00000598074 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
STRN4-216ENST00000598074 CUX1P39880 1505 aa23.24■■□□□ 1.31
STRN4-216ENST00000598074 ERCC6L2Q5T890 1561 aa23.23■■□□□ 1.31
STRN4-216ENST00000598074 KIF13AQ9H1H9 1805 aa23.13■■□□□ 1.29
STRN4-216ENST00000598074 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
STRN4-216ENST00000598074 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
STRN4-216ENST00000598074 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
STRN4-216ENST00000598074 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
STRN4-216ENST00000598074 SHROOM2Q13796 1616 aa23.01■■□□□ 1.27
STRN4-216ENST00000598074 NUP160Q12769 1436 aa23.01■■□□□ 1.27
STRN4-216ENST00000598074 ADAMTS12P58397 1594 aa22.98■■□□□ 1.27
STRN4-216ENST00000598074 ILDR1Q86SU0 546 aaPredicted RBP22.96■■□□□ 1.27
STRN4-216ENST00000598074 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
STRN4-216ENST00000598074 KDM4FA0A1W2PPD8 638 aa22.91■■□□□ 1.26
STRN4-216ENST00000598074 FAM69CQ0P6D2 419 aa22.88■■□□□ 1.25
STRN4-216ENST00000598074 ABCC10Q5T3U5 1492 aa22.87■■□□□ 1.25
STRN4-216ENST00000598074 PRG4Q92954 1404 aaPredicted RBP22.85■■□□□ 1.25
STRN4-216ENST00000598074 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms