RNA–Protein interactions for RNA: ENST00000597977.5

SYDE1-202, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 2

Gene SYDE1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-202ENST00000597977 NISCHQ9Y2I1 1504 aa33.19■■■□□ 2.9
SYDE1-202ENST00000597977 ABCC9O60706 1549 aa30.12■■■□□ 2.41
SYDE1-202ENST00000597977 CCDC180Q9P1Z9 1646 aa29.91■■■□□ 2.38
SYDE1-202ENST00000597977 DNAJC5BQ9UF47 199 aa28.79■■■□□ 2.2
SYDE1-202ENST00000597977 RB1CC1Q8TDY2 1594 aa28.36■■■□□ 2.13
SYDE1-202ENST00000597977 NACADO15069 1562 aa28.15■■■□□ 2.1
SYDE1-202ENST00000597977 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.07
SYDE1-202ENST00000597977 UNC13AQ9UPW8 1703 aa27.99■■■□□ 2.07
SYDE1-202ENST00000597977 DCAF8L2P0C7V8 631 aa27.9■■■□□ 2.06
SYDE1-202ENST00000597977 MYO15BQ96JP2 1530 aa27.75■■■□□ 2.03
SYDE1-202ENST00000597977 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
SYDE1-202ENST00000597977 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
SYDE1-202ENST00000597977 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
SYDE1-202ENST00000597977 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
SYDE1-202ENST00000597977 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
SYDE1-202ENST00000597977 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
SYDE1-202ENST00000597977 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
SYDE1-202ENST00000597977 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
SYDE1-202ENST00000597977 DNAJC5Q9H3Z4 198 aa26.77■■□□□ 1.88
SYDE1-202ENST00000597977 CUX2O14529 1486 aa26.1■■□□□ 1.77
SYDE1-202ENST00000597977 ERCC6Q03468 1493 aa26.03■■□□□ 1.76
SYDE1-202ENST00000597977 SMARCA4P51532 1647 aa25.98■■□□□ 1.75
SYDE1-202ENST00000597977 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
SYDE1-202ENST00000597977 ATAD2BQ9ULI0 1458 aa25.9■■□□□ 1.74
SYDE1-202ENST00000597977 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
SYDE1-202ENST00000597977 SMARCA2P51531 1590 aa25.83■■□□□ 1.73
SYDE1-202ENST00000597977 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
SYDE1-202ENST00000597977 NESP48681 1621 aa25.73■■□□□ 1.71
SYDE1-202ENST00000597977 PEG3Q9GZU2 1588 aa25.7■■□□□ 1.71
SYDE1-202ENST00000597977 BAZ1BQ9UIG0 1483 aaKnown RBP25.65■■□□□ 1.7
SYDE1-202ENST00000597977 MROH2BQ7Z745 1585 aa25.61■■□□□ 1.69
SYDE1-202ENST00000597977 THOC2Q8NI27 1593 aaKnown RBP25.5■■□□□ 1.67
SYDE1-202ENST00000597977 TRIM41Q8WV44 630 aa25.46■■□□□ 1.67
SYDE1-202ENST00000597977 KIF21AQ7Z4S6 1674 aa25.44■■□□□ 1.66
SYDE1-202ENST00000597977 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
SYDE1-202ENST00000597977 WIZO95785 1651 aa25.38■■□□□ 1.65
SYDE1-202ENST00000597977 PDS5BQ9NTI5 1447 aa25.26■■□□□ 1.63
SYDE1-202ENST00000597977 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
SYDE1-202ENST00000597977 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
SYDE1-202ENST00000597977 RSF1Q96T23 1441 aaPredicted RBP25.06■■□□□ 1.6
SYDE1-202ENST00000597977 WDR62O43379 1518 aa25.05■■□□□ 1.6
SYDE1-202ENST00000597977 TOP2AP11388 1531 aaKnown RBP25■■□□□ 1.59
SYDE1-202ENST00000597977 CEP164Q9UPV0 1460 aa24.93■■□□□ 1.58
SYDE1-202ENST00000597977 PRDM2Q13029 1718 aa24.91■■□□□ 1.58
SYDE1-202ENST00000597977 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.58
SYDE1-202ENST00000597977 CFTRP13569 1480 aa24.89■■□□□ 1.57
SYDE1-202ENST00000597977 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
SYDE1-202ENST00000597977 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
SYDE1-202ENST00000597977 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.53
SYDE1-202ENST00000597977 RIMBP3CA6NJZ7 1639 aa24.58■■□□□ 1.53
SYDE1-202ENST00000597977 RIMBP3BA6NNM3 1639 aa24.58■■□□□ 1.53
SYDE1-202ENST00000597977 RIMBP3Q9UFD9 1639 aa24.58■■□□□ 1.53
SYDE1-202ENST00000597977 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
SYDE1-202ENST00000597977 ZNF608Q9ULD9 1512 aaPredicted RBP24.47■■□□□ 1.51
SYDE1-202ENST00000597977 ARHGEF11O15085 1522 aa24.46■■□□□ 1.51
SYDE1-202ENST00000597977 TOPBP1Q92547 1522 aa24.46■■□□□ 1.51
SYDE1-202ENST00000597977 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
SYDE1-202ENST00000597977 DNMBPQ6XZF7 1577 aa24.4■■□□□ 1.5
SYDE1-202ENST00000597977 IFT140Q96RY7 1462 aa24.39■■□□□ 1.5
SYDE1-202ENST00000597977 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
SYDE1-202ENST00000597977 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
SYDE1-202ENST00000597977 TRHP20396 242 aaPredicted RBP24.29■■□□□ 1.48
SYDE1-202ENST00000597977 ABCC8Q09428 1581 aa24.28■■□□□ 1.48
SYDE1-202ENST00000597977 CHD1O14646 1710 aa24.27■■□□□ 1.48
SYDE1-202ENST00000597977 POLA1P09884 1462 aaPredicted RBP24.22■■□□□ 1.47
SYDE1-202ENST00000597977 ARAP1Q96P48 1450 aa24.21■■□□□ 1.47
SYDE1-202ENST00000597977 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.46
SYDE1-202ENST00000597977 FBLN2P98095 1184 aa24.17■■□□□ 1.46
SYDE1-202ENST00000597977 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
SYDE1-202ENST00000597977 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
SYDE1-202ENST00000597977 CUX1P39880 1505 aa24.08■■□□□ 1.45
SYDE1-202ENST00000597977 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
SYDE1-202ENST00000597977 SOGA1O94964 1423 aa23.98■■□□□ 1.43
SYDE1-202ENST00000597977 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
SYDE1-202ENST00000597977 PBRM1Q86U86 1689 aa23.96■■□□□ 1.43
SYDE1-202ENST00000597977 SNAPC4Q5SXM2 1469 aa23.96■■□□□ 1.43
SYDE1-202ENST00000597977 TDRD9Q8NDG6 1382 aaKnown RBP23.96■■□□□ 1.43
SYDE1-202ENST00000597977 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
SYDE1-202ENST00000597977 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
SYDE1-202ENST00000597977 MAGI1Q96QZ7 1491 aaPredicted RBP23.86■■□□□ 1.41
SYDE1-202ENST00000597977 CHMP7Q8WUX9 453 aaPredicted RBP23.85■■□□□ 1.41
SYDE1-202ENST00000597977 GRIN2BQ13224 1484 aa23.82■■□□□ 1.4
SYDE1-202ENST00000597977 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
SYDE1-202ENST00000597977 SYNJ2O15056 1496 aa23.77■■□□□ 1.4
SYDE1-202ENST00000597977 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
SYDE1-202ENST00000597977 BIVM-ERCC5R4GMW8 1640 aa23.76■■□□□ 1.39
SYDE1-202ENST00000597977 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
SYDE1-202ENST00000597977 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
SYDE1-202ENST00000597977 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
SYDE1-202ENST00000597977 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.36
SYDE1-202ENST00000597977 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
SYDE1-202ENST00000597977 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
SYDE1-202ENST00000597977 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
SYDE1-202ENST00000597977 SHROOM2Q13796 1616 aa23.49■■□□□ 1.35
SYDE1-202ENST00000597977 NUP160Q12769 1436 aa23.49■■□□□ 1.35
SYDE1-202ENST00000597977 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
SYDE1-202ENST00000597977 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
SYDE1-202ENST00000597977 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
SYDE1-202ENST00000597977 KIF13AQ9H1H9 1805 aa23.26■■□□□ 1.31
SYDE1-202ENST00000597977 PRG4Q92954 1404 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms