RNA–Protein interactions for RNA: ENST00000597967.5

VAV1-205, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 4

Gene VAV1, Length 563 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-205ENST00000597967 NISCHQ9Y2I1 1504 aa31.49■■■□□ 2.63
VAV1-205ENST00000597967 ABCC9O60706 1549 aa29.12■■■□□ 2.25
VAV1-205ENST00000597967 CCDC180Q9P1Z9 1646 aa28.39■■■□□ 2.13
VAV1-205ENST00000597967 DNAJC5BQ9UF47 199 aa27.91■■■□□ 2.06
VAV1-205ENST00000597967 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
VAV1-205ENST00000597967 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
VAV1-205ENST00000597967 NACADO15069 1562 aa26.97■■□□□ 1.91
VAV1-205ENST00000597967 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
VAV1-205ENST00000597967 DCAF8L2P0C7V8 631 aa26.77■■□□□ 1.88
VAV1-205ENST00000597967 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
VAV1-205ENST00000597967 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
VAV1-205ENST00000597967 CECR2Q9BXF3 1484 aa26.26■■□□□ 1.79
VAV1-205ENST00000597967 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
VAV1-205ENST00000597967 ZCCHC6Q5VYS8 1495 aaKnown RBP26.08■■□□□ 1.77
VAV1-205ENST00000597967 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
VAV1-205ENST00000597967 SHROOM4Q9ULL8 1493 aa26.06■■□□□ 1.76
VAV1-205ENST00000597967 DNAJC5Q9H3Z4 198 aa26.04■■□□□ 1.76
VAV1-205ENST00000597967 EIF4G1Q04637 1599 aaKnown RBP26.01■■□□□ 1.75
VAV1-205ENST00000597967 SCRIBQ14160 1630 aa25.92■■□□□ 1.74
VAV1-205ENST00000597967 CUX2O14529 1486 aa25.29■■□□□ 1.64
VAV1-205ENST00000597967 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
VAV1-205ENST00000597967 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
VAV1-205ENST00000597967 NESP48681 1621 aa24.84■■□□□ 1.57
VAV1-205ENST00000597967 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
VAV1-205ENST00000597967 TRIM41Q8WV44 630 aa24.71■■□□□ 1.55
VAV1-205ENST00000597967 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
VAV1-205ENST00000597967 HMGXB3Q12766 1538 aa24.67■■□□□ 1.54
VAV1-205ENST00000597967 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
VAV1-205ENST00000597967 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
VAV1-205ENST00000597967 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
VAV1-205ENST00000597967 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
VAV1-205ENST00000597967 LAMC3Q9Y6N6 1575 aa24.47■■□□□ 1.51
VAV1-205ENST00000597967 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
VAV1-205ENST00000597967 PEG3Q9GZU2 1588 aa24.41■■□□□ 1.5
VAV1-205ENST00000597967 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
VAV1-205ENST00000597967 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
VAV1-205ENST00000597967 MRC2Q9UBG0 1479 aa24.2■■□□□ 1.47
VAV1-205ENST00000597967 WDR62O43379 1518 aa24.17■■□□□ 1.46
VAV1-205ENST00000597967 CADPSQ9ULU8 1353 aa24.12■■□□□ 1.45
VAV1-205ENST00000597967 OSCARQ8IYS5 282 aa24■■□□□ 1.43
VAV1-205ENST00000597967 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
VAV1-205ENST00000597967 WIZO95785 1651 aa23.92■■□□□ 1.42
VAV1-205ENST00000597967 FANCD2Q9BXW9 1451 aa23.89■■□□□ 1.42
VAV1-205ENST00000597967 RIMBP3CA6NJZ7 1639 aa23.87■■□□□ 1.41
VAV1-205ENST00000597967 RIMBP3BA6NNM3 1639 aa23.87■■□□□ 1.41
VAV1-205ENST00000597967 RIMBP3Q9UFD9 1639 aa23.87■■□□□ 1.41
VAV1-205ENST00000597967 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
VAV1-205ENST00000597967 CFTRP13569 1480 aa23.71■■□□□ 1.39
VAV1-205ENST00000597967 RSF1Q96T23 1441 aaPredicted RBP23.7■■□□□ 1.38
VAV1-205ENST00000597967 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
VAV1-205ENST00000597967 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
VAV1-205ENST00000597967 ZNF608Q9ULD9 1512 aaPredicted RBP23.6■■□□□ 1.37
VAV1-205ENST00000597967 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
VAV1-205ENST00000597967 TRHP20396 242 aaPredicted RBP23.52■■□□□ 1.36
VAV1-205ENST00000597967 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
VAV1-205ENST00000597967 PRDM2Q13029 1718 aa23.48■■□□□ 1.35
VAV1-205ENST00000597967 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
VAV1-205ENST00000597967 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
VAV1-205ENST00000597967 CHD1O14646 1710 aa23.42■■□□□ 1.34
VAV1-205ENST00000597967 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
VAV1-205ENST00000597967 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
VAV1-205ENST00000597967 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
VAV1-205ENST00000597967 AQRO60306 1485 aaKnown RBP eCLIP23.28■■□□□ 1.32
VAV1-205ENST00000597967 FBLN2P98095 1184 aa23.26■■□□□ 1.31
VAV1-205ENST00000597967 ABCC8Q09428 1581 aa23.24■■□□□ 1.31
VAV1-205ENST00000597967 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
VAV1-205ENST00000597967 DNMBPQ6XZF7 1577 aa23.22■■□□□ 1.31
VAV1-205ENST00000597967 POLA1P09884 1462 aaPredicted RBP23.09■■□□□ 1.29
VAV1-205ENST00000597967 CLASP1Q7Z460 1538 aa23.08■■□□□ 1.28
VAV1-205ENST00000597967 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
VAV1-205ENST00000597967 SNAPC4Q5SXM2 1469 aa23.04■■□□□ 1.28
VAV1-205ENST00000597967 TDRD9Q8NDG6 1382 aaKnown RBP23.02■■□□□ 1.28
VAV1-205ENST00000597967 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
VAV1-205ENST00000597967 SOGA1O94964 1423 aa22.95■■□□□ 1.26
VAV1-205ENST00000597967 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
VAV1-205ENST00000597967 MAGI1Q96QZ7 1491 aaPredicted RBP22.88■■□□□ 1.25
VAV1-205ENST00000597967 WDR97A6NE52 1622 aa22.88■■□□□ 1.25
VAV1-205ENST00000597967 GAPVD1Q14C86 1478 aa22.87■■□□□ 1.25
VAV1-205ENST00000597967 FGD5Q6ZNL6 1462 aa22.86■■□□□ 1.25
VAV1-205ENST00000597967 SYNJ2O15056 1496 aa22.83■■□□□ 1.25
VAV1-205ENST00000597967 GRIN2BQ13224 1484 aa22.82■■□□□ 1.24
VAV1-205ENST00000597967 CUX1P39880 1505 aa22.77■■□□□ 1.24
VAV1-205ENST00000597967 PBRM1Q86U86 1689 aa22.76■■□□□ 1.23
VAV1-205ENST00000597967 ERCC6L2Q5T890 1561 aa22.74■■□□□ 1.23
VAV1-205ENST00000597967 KIF13AQ9H1H9 1805 aa22.61■■□□□ 1.21
VAV1-205ENST00000597967 ABCA5Q8WWZ7 1642 aa22.6■■□□□ 1.21
VAV1-205ENST00000597967 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
VAV1-205ENST00000597967 CEP170Q5SW79 1584 aa22.58■■□□□ 1.2
VAV1-205ENST00000597967 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
VAV1-205ENST00000597967 ADAMTS12P58397 1594 aa22.48■■□□□ 1.19
VAV1-205ENST00000597967 SHROOM2Q13796 1616 aa22.48■■□□□ 1.19
VAV1-205ENST00000597967 NUP160Q12769 1436 aa22.48■■□□□ 1.19
VAV1-205ENST00000597967 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
VAV1-205ENST00000597967 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
VAV1-205ENST00000597967 BIVM-ERCC5R4GMW8 1640 aa22.42■■□□□ 1.18
VAV1-205ENST00000597967 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
VAV1-205ENST00000597967 ILDR1Q86SU0 546 aaPredicted RBP22.4■■□□□ 1.18
VAV1-205ENST00000597967 KDM4FA0A1W2PPD8 638 aa22.36■■□□□ 1.17
VAV1-205ENST00000597967 FAM69CQ0P6D2 419 aa22.35■■□□□ 1.17
VAV1-205ENST00000597967 PRG4Q92954 1404 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms