RNA–Protein interactions for RNA: ENST00000597936.5

SNRNP70-205, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-205ENST00000597936 NISCHQ9Y2I1 1504 aa46.52■■■■■ 5.04
SNRNP70-205ENST00000597936 CCDC180Q9P1Z9 1646 aa41.52■■■■■ 4.24
SNRNP70-205ENST00000597936 ABCC9O60706 1549 aa40.84■■■■■ 4.13
SNRNP70-205ENST00000597936 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
SNRNP70-205ENST00000597936 NACADO15069 1562 aa39.05■■■■□ 3.84
SNRNP70-205ENST00000597936 DCAF8L2P0C7V8 631 aa38.78■■■■□ 3.8
SNRNP70-205ENST00000597936 MYO15BQ96JP2 1530 aa38.76■■■■□ 3.8
SNRNP70-205ENST00000597936 ZCCHC6Q5VYS8 1495 aaKnown RBP38.72■■■■□ 3.79
SNRNP70-205ENST00000597936 DCAF1Q9Y4B6 1507 aa38.49■■■■□ 3.75
SNRNP70-205ENST00000597936 UNC13AQ9UPW8 1703 aa38.41■■■■□ 3.74
SNRNP70-205ENST00000597936 BICRAQ9NZM4 1560 aa38.09■■■■□ 3.69
SNRNP70-205ENST00000597936 PABPN1Q86U42 306 aaKnown RBP eCLIP38.06■■■■□ 3.68
SNRNP70-205ENST00000597936 DNAJC5BQ9UF47 199 aa37.93■■■■□ 3.66
SNRNP70-205ENST00000597936 SCRIBQ14160 1630 aa37.83■■■■□ 3.65
SNRNP70-205ENST00000597936 SHROOM4Q9ULL8 1493 aa37.64■■■■□ 3.62
SNRNP70-205ENST00000597936 EIF4G1Q04637 1599 aaKnown RBP37.05■■■■□ 3.52
SNRNP70-205ENST00000597936 CC2D2AQ9P2K1 1620 aa36.97■■■■□ 3.51
SNRNP70-205ENST00000597936 CECR2Q9BXF3 1484 aa36.8■■■■□ 3.48
SNRNP70-205ENST00000597936 SMARCA4P51532 1647 aa36.18■■■■□ 3.38
SNRNP70-205ENST00000597936 BAZ1AQ9NRL2 1556 aaPredicted RBP36.05■■■■□ 3.36
SNRNP70-205ENST00000597936 NCAPD3P42695 1498 aa36.05■■■■□ 3.36
SNRNP70-205ENST00000597936 ATAD2BQ9ULI0 1458 aa36.02■■■■□ 3.36
SNRNP70-205ENST00000597936 SMARCA2P51531 1590 aa35.94■■■■□ 3.34
SNRNP70-205ENST00000597936 HMGXB3Q12766 1538 aa35.87■■■■□ 3.33
SNRNP70-205ENST00000597936 MROH2BQ7Z745 1585 aa35.86■■■■□ 3.33
SNRNP70-205ENST00000597936 PEG3Q9GZU2 1588 aa35.85■■■■□ 3.33
SNRNP70-205ENST00000597936 BAZ1BQ9UIG0 1483 aaKnown RBP35.68■■■■□ 3.3
SNRNP70-205ENST00000597936 WIZO95785 1651 aa35.48■■■■□ 3.27
SNRNP70-205ENST00000597936 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.24
SNRNP70-205ENST00000597936 NESP48681 1621 aa35.29■■■■□ 3.24
SNRNP70-205ENST00000597936 ERCC6Q03468 1493 aa35.28■■■■□ 3.24
SNRNP70-205ENST00000597936 CUX2O14529 1486 aa35.16■■■■□ 3.22
SNRNP70-205ENST00000597936 LAMC3Q9Y6N6 1575 aa35.15■■■■□ 3.22
SNRNP70-205ENST00000597936 TOP2AP11388 1531 aaKnown RBP35.06■■■■□ 3.2
SNRNP70-205ENST00000597936 CADPSQ9ULU8 1353 aa34.94■■■■□ 3.18
SNRNP70-205ENST00000597936 KIF21AQ7Z4S6 1674 aa34.91■■■■□ 3.18
SNRNP70-205ENST00000597936 PDS5BQ9NTI5 1447 aa34.89■■■■□ 3.18
SNRNP70-205ENST00000597936 THOC2Q8NI27 1593 aaKnown RBP34.87■■■■□ 3.17
SNRNP70-205ENST00000597936 CFTRP13569 1480 aa34.71■■■■□ 3.15
SNRNP70-205ENST00000597936 DNAJC5Q9H3Z4 198 aa34.64■■■■□ 3.14
SNRNP70-205ENST00000597936 CCDC88BA6NC98 1476 aa34.62■■■■□ 3.13
SNRNP70-205ENST00000597936 FANCD2Q9BXW9 1451 aa34.56■■■■□ 3.12
SNRNP70-205ENST00000597936 MRC2Q9UBG0 1479 aa34.56■■■■□ 3.12
SNRNP70-205ENST00000597936 CEP164Q9UPV0 1460 aa34.53■■■■□ 3.12
SNRNP70-205ENST00000597936 WDR62O43379 1518 aa34.5■■■■□ 3.11
SNRNP70-205ENST00000597936 PRDM2Q13029 1718 aa34.5■■■■□ 3.11
SNRNP70-205ENST00000597936 URB2Q14146 1524 aaKnown RBP34.28■■■■□ 3.08
SNRNP70-205ENST00000597936 SUPT5HO00267 1087 aaKnown RBP34.07■■■■□ 3.04
SNRNP70-205ENST00000597936 TOPBP1Q92547 1522 aa34■■■■□ 3.03
SNRNP70-205ENST00000597936 DNMBPQ6XZF7 1577 aa33.94■■■■□ 3.02
SNRNP70-205ENST00000597936 ABCC8Q09428 1581 aa33.91■■■■□ 3.02
SNRNP70-205ENST00000597936 IFT140Q96RY7 1462 aa33.82■■■■□ 3.01
SNRNP70-205ENST00000597936 ZNF608Q9ULD9 1512 aaPredicted RBP33.74■■■□□ 2.99
SNRNP70-205ENST00000597936 TARBP1Q13395 1621 aaKnown RBP33.7■■■□□ 2.99
SNRNP70-205ENST00000597936 POLA1P09884 1462 aaPredicted RBP33.69■■■□□ 2.98
SNRNP70-205ENST00000597936 CUX1P39880 1505 aa33.66■■■□□ 2.98
SNRNP70-205ENST00000597936 EIF4G3O43432 1585 aaKnown RBP33.62■■■□□ 2.97
SNRNP70-205ENST00000597936 FGD5Q6ZNL6 1462 aa33.56■■■□□ 2.96
SNRNP70-205ENST00000597936 OSCARQ8IYS5 282 aa33.55■■■□□ 2.96
SNRNP70-205ENST00000597936 RAD54L2Q9Y4B4 1467 aa33.55■■■□□ 2.96
SNRNP70-205ENST00000597936 SOGA1O94964 1423 aa33.49■■■□□ 2.95
SNRNP70-205ENST00000597936 AQRO60306 1485 aaKnown RBP eCLIP33.48■■■□□ 2.956e-9■■■■■ 40.3
SNRNP70-205ENST00000597936 WDR97A6NE52 1622 aa33.4■■■□□ 2.94
SNRNP70-205ENST00000597936 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
SNRNP70-205ENST00000597936 BIVM-ERCC5R4GMW8 1640 aa33.31■■■□□ 2.92
SNRNP70-205ENST00000597936 TOP2BQ02880 1626 aa33.29■■■□□ 2.92
SNRNP70-205ENST00000597936 SYNJ1O43426 1573 aa33.29■■■□□ 2.92
SNRNP70-205ENST00000597936 WRNQ14191 1432 aaPredicted RBP eCLIP33.28■■■□□ 2.92
SNRNP70-205ENST00000597936 CHD1O14646 1710 aa33.27■■■□□ 2.92
SNRNP70-205ENST00000597936 ABCA10Q8WWZ4 1543 aa33.23■■■□□ 2.91
SNRNP70-205ENST00000597936 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
SNRNP70-205ENST00000597936 ABCA5Q8WWZ7 1642 aa33.17■■■□□ 2.9
SNRNP70-205ENST00000597936 TRIM41Q8WV44 630 aa33.16■■■□□ 2.9
SNRNP70-205ENST00000597936 GRIN2BQ13224 1484 aa33.15■■■□□ 2.9
SNRNP70-205ENST00000597936 PBRM1Q86U86 1689 aa33.15■■■□□ 2.9
SNRNP70-205ENST00000597936 GAPVD1Q14C86 1478 aa33.12■■■□□ 2.89
SNRNP70-205ENST00000597936 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
SNRNP70-205ENST00000597936 RIMBP3CA6NJZ7 1639 aa33.09■■■□□ 2.89
SNRNP70-205ENST00000597936 RIMBP3BA6NNM3 1639 aa33.09■■■□□ 2.89
SNRNP70-205ENST00000597936 RIMBP3Q9UFD9 1639 aa33.09■■■□□ 2.89
SNRNP70-205ENST00000597936 ARHGEF11O15085 1522 aa33.02■■■□□ 2.88
SNRNP70-205ENST00000597936 FBLN2P98095 1184 aa33.02■■■□□ 2.88
SNRNP70-205ENST00000597936 SYNJ2O15056 1496 aa32.99■■■□□ 2.87
SNRNP70-205ENST00000597936 CLASP1Q7Z460 1538 aa32.91■■■□□ 2.86
SNRNP70-205ENST00000597936 CHMP7Q8WUX9 453 aaPredicted RBP32.9■■■□□ 2.86
SNRNP70-205ENST00000597936 ADAMTS12P58397 1594 aa32.86■■■□□ 2.85
SNRNP70-205ENST00000597936 ERICH3Q5RHP9 1530 aa32.82■■■□□ 2.84
SNRNP70-205ENST00000597936 GRIN2AQ12879 1464 aa32.75■■■□□ 2.83
SNRNP70-205ENST00000597936 FHAD1B1AJZ9 1412 aa32.72■■■□□ 2.83
SNRNP70-205ENST00000597936 ARAP1Q96P48 1450 aa32.71■■■□□ 2.83
SNRNP70-205ENST00000597936 CYB5RLQ6IPT4 315 aa32.68■■■□□ 2.82
SNRNP70-205ENST00000597936 CEP170Q5SW79 1584 aa32.66■■■□□ 2.82
SNRNP70-205ENST00000597936 NUP160Q12769 1436 aa32.64■■■□□ 2.82
SNRNP70-205ENST00000597936 KIF27Q86VH2 1401 aa32.57■■■□□ 2.8
SNRNP70-205ENST00000597936 IGF1RP08069 1367 aa32.5■■■□□ 2.79
SNRNP70-205ENST00000597936 SHROOM2Q13796 1616 aa32.48■■■□□ 2.79
SNRNP70-205ENST00000597936 CUL7Q14999 1698 aa32.47■■■□□ 2.79
SNRNP70-205ENST00000597936 ERCC6L2Q5T890 1561 aa32.43■■■□□ 2.78
SNRNP70-205ENST00000597936 RUSC2Q8N2Y8 1516 aa32.4■■■□□ 2.78
SNRNP70-205ENST00000597936 CARMIL1Q5VZK9 1371 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms