RNA–Protein interactions for RNA: ENST00000597687.1

SH2D3A-207, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 859 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-207ENST00000597687 NISCHQ9Y2I1 1504 aa36.61■■■■□ 3.45
SH2D3A-207ENST00000597687 CCDC180Q9P1Z9 1646 aa33.07■■■□□ 2.88
SH2D3A-207ENST00000597687 ABCC9O60706 1549 aa33.02■■■□□ 2.88
SH2D3A-207ENST00000597687 RB1CC1Q8TDY2 1594 aa31.53■■■□□ 2.64
SH2D3A-207ENST00000597687 NACADO15069 1562 aa31.25■■■□□ 2.59
SH2D3A-207ENST00000597687 DCAF8L2P0C7V8 631 aa30.99■■■□□ 2.55
SH2D3A-207ENST00000597687 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
SH2D3A-207ENST00000597687 MYO15BQ96JP2 1530 aa30.74■■■□□ 2.51
SH2D3A-207ENST00000597687 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.5
SH2D3A-207ENST00000597687 PABPN1Q86U42 306 aaKnown RBP eCLIP30.63■■■□□ 2.49
SH2D3A-207ENST00000597687 BICRAQ9NZM4 1560 aa30.38■■■□□ 2.45
SH2D3A-207ENST00000597687 ZCCHC6Q5VYS8 1495 aaKnown RBP30.34■■■□□ 2.45
SH2D3A-207ENST00000597687 DCAF1Q9Y4B6 1507 aa30.29■■■□□ 2.44
SH2D3A-207ENST00000597687 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
SH2D3A-207ENST00000597687 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
SH2D3A-207ENST00000597687 CC2D2AQ9P2K1 1620 aa29.86■■■□□ 2.37
SH2D3A-207ENST00000597687 CECR2Q9BXF3 1484 aa29.8■■■□□ 2.36
SH2D3A-207ENST00000597687 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
SH2D3A-207ENST00000597687 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
SH2D3A-207ENST00000597687 ERCC6Q03468 1493 aa28.7■■■□□ 2.18
SH2D3A-207ENST00000597687 SMARCA2P51531 1590 aa28.7■■■□□ 2.18
SH2D3A-207ENST00000597687 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
SH2D3A-207ENST00000597687 CUX2O14529 1486 aa28.63■■■□□ 2.17
SH2D3A-207ENST00000597687 ATAD2BQ9ULI0 1458 aa28.63■■■□□ 2.17
SH2D3A-207ENST00000597687 HMGXB3Q12766 1538 aa28.63■■■□□ 2.17
SH2D3A-207ENST00000597687 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
SH2D3A-207ENST00000597687 DNAJC5Q9H3Z4 198 aa28.54■■■□□ 2.16
SH2D3A-207ENST00000597687 BAZ1BQ9UIG0 1483 aaKnown RBP28.47■■■□□ 2.15
SH2D3A-207ENST00000597687 PEG3Q9GZU2 1588 aa28.34■■■□□ 2.13
SH2D3A-207ENST00000597687 NESP48681 1621 aa28.25■■■□□ 2.11
SH2D3A-207ENST00000597687 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
SH2D3A-207ENST00000597687 MROH2BQ7Z745 1585 aa28.14■■■□□ 2.1
SH2D3A-207ENST00000597687 THOC2Q8NI27 1593 aaKnown RBP28.11■■■□□ 2.09
SH2D3A-207ENST00000597687 PDS5BQ9NTI5 1447 aa28.09■■■□□ 2.09
SH2D3A-207ENST00000597687 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
SH2D3A-207ENST00000597687 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
SH2D3A-207ENST00000597687 WIZO95785 1651 aa27.85■■■□□ 2.05
SH2D3A-207ENST00000597687 MRC2Q9UBG0 1479 aa27.82■■■□□ 2.04
SH2D3A-207ENST00000597687 WDR62O43379 1518 aa27.72■■■□□ 2.03
SH2D3A-207ENST00000597687 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
SH2D3A-207ENST00000597687 FANCD2Q9BXW9 1451 aa27.61■■■□□ 2.01
SH2D3A-207ENST00000597687 TOP2AP11388 1531 aaKnown RBP27.58■■■□□ 2.01
SH2D3A-207ENST00000597687 CFTRP13569 1480 aa27.52■■■□□ 2
SH2D3A-207ENST00000597687 RSF1Q96T23 1441 aaPredicted RBP27.51■■□□□ 1.99
SH2D3A-207ENST00000597687 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
SH2D3A-207ENST00000597687 TRIM41Q8WV44 630 aa27.37■■□□□ 1.97
SH2D3A-207ENST00000597687 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
SH2D3A-207ENST00000597687 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
SH2D3A-207ENST00000597687 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
SH2D3A-207ENST00000597687 IFT140Q96RY7 1462 aa27.14■■□□□ 1.94
SH2D3A-207ENST00000597687 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
SH2D3A-207ENST00000597687 TOPBP1Q92547 1522 aa27.05■■□□□ 1.92
SH2D3A-207ENST00000597687 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.92
SH2D3A-207ENST00000597687 EIF4G3O43432 1585 aaKnown RBP26.96■■□□□ 1.91
SH2D3A-207ENST00000597687 ZNF608Q9ULD9 1512 aaPredicted RBP26.95■■□□□ 1.91
SH2D3A-207ENST00000597687 RIMBP3CA6NJZ7 1639 aa26.89■■□□□ 1.9
SH2D3A-207ENST00000597687 RIMBP3BA6NNM3 1639 aa26.89■■□□□ 1.9
SH2D3A-207ENST00000597687 RIMBP3Q9UFD9 1639 aa26.89■■□□□ 1.9
SH2D3A-207ENST00000597687 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
SH2D3A-207ENST00000597687 TARBP1Q13395 1621 aaKnown RBP26.78■■□□□ 1.88
SH2D3A-207ENST00000597687 CHD1O14646 1710 aa26.78■■□□□ 1.88
SH2D3A-207ENST00000597687 POLA1P09884 1462 aaPredicted RBP26.75■■□□□ 1.87
SH2D3A-207ENST00000597687 AQRO60306 1485 aaKnown RBP eCLIP26.72■■□□□ 1.87
SH2D3A-207ENST00000597687 WDR97A6NE52 1622 aa26.7■■□□□ 1.86
SH2D3A-207ENST00000597687 FBLN2P98095 1184 aa26.69■■□□□ 1.86
SH2D3A-207ENST00000597687 SOGA1O94964 1423 aa26.64■■□□□ 1.85
SH2D3A-207ENST00000597687 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
SH2D3A-207ENST00000597687 RAD54L2Q9Y4B4 1467 aa26.59■■□□□ 1.85
SH2D3A-207ENST00000597687 CYB5RLQ6IPT4 315 aa26.55■■□□□ 1.84
SH2D3A-207ENST00000597687 TDRD9Q8NDG6 1382 aaKnown RBP26.54■■□□□ 1.84
SH2D3A-207ENST00000597687 SNAPC4Q5SXM2 1469 aa26.54■■□□□ 1.84
SH2D3A-207ENST00000597687 MAGI1Q96QZ7 1491 aaPredicted RBP26.53■■□□□ 1.84
SH2D3A-207ENST00000597687 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
SH2D3A-207ENST00000597687 CUX1P39880 1505 aa26.49■■□□□ 1.83
SH2D3A-207ENST00000597687 CHMP7Q8WUX9 453 aaPredicted RBP26.48■■□□□ 1.83
SH2D3A-207ENST00000597687 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
SH2D3A-207ENST00000597687 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
SH2D3A-207ENST00000597687 PBRM1Q86U86 1689 aa26.42■■□□□ 1.82
SH2D3A-207ENST00000597687 TRHP20396 242 aaPredicted RBP26.41■■□□□ 1.82
SH2D3A-207ENST00000597687 SYNJ2O15056 1496 aa26.41■■□□□ 1.82
SH2D3A-207ENST00000597687 CLASP1Q7Z460 1538 aa26.39■■□□□ 1.82
SH2D3A-207ENST00000597687 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
SH2D3A-207ENST00000597687 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
SH2D3A-207ENST00000597687 SUPT5HO00267 1087 aaKnown RBP26.28■■□□□ 1.8
SH2D3A-207ENST00000597687 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
SH2D3A-207ENST00000597687 WRNQ14191 1432 aaPredicted RBP eCLIP26.21■■□□□ 1.79
SH2D3A-207ENST00000597687 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.77
SH2D3A-207ENST00000597687 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
SH2D3A-207ENST00000597687 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
SH2D3A-207ENST00000597687 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
SH2D3A-207ENST00000597687 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
SH2D3A-207ENST00000597687 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
SH2D3A-207ENST00000597687 NUP160Q12769 1436 aa25.98■■□□□ 1.75
SH2D3A-207ENST00000597687 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
SH2D3A-207ENST00000597687 SHROOM2Q13796 1616 aa25.91■■□□□ 1.74
SH2D3A-207ENST00000597687 ERCC6L2Q5T890 1561 aa25.86■■□□□ 1.73
SH2D3A-207ENST00000597687 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
SH2D3A-207ENST00000597687 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
SH2D3A-207ENST00000597687 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
SH2D3A-207ENST00000597687 CUL7Q14999 1698 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms