RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, humanhuman

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-210ENST00000597641 NISCHQ9Y2I1 1504 aa38.43■■■■□ 3.74
PRKD2-210ENST00000597641 ABCC9O60706 1549 aa34.64■■■■□ 3.14
PRKD2-210ENST00000597641 CCDC180Q9P1Z9 1646 aa34.5■■■■□ 3.11
PRKD2-210ENST00000597641 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
PRKD2-210ENST00000597641 DNAJC5BQ9UF47 199 aa32.67■■■□□ 2.82
PRKD2-210ENST00000597641 NACADO15069 1562 aa32.59■■■□□ 2.81
PRKD2-210ENST00000597641 DCAF8L2P0C7V8 631 aa32.42■■■□□ 2.78
PRKD2-210ENST00000597641 UNC13AQ9UPW8 1703 aa32.34■■■□□ 2.77
PRKD2-210ENST00000597641 PABPN1Q86U42 306 aaKnown RBP eCLIP32.24■■■□□ 2.75
PRKD2-210ENST00000597641 MYO15BQ96JP2 1530 aa32.08■■■□□ 2.73
PRKD2-210ENST00000597641 BICRAQ9NZM4 1560 aa32.04■■■□□ 2.72
PRKD2-210ENST00000597641 ZCCHC6Q5VYS8 1495 aaKnown RBP31.83■■■□□ 2.69
PRKD2-210ENST00000597641 DCAF1Q9Y4B6 1507 aa31.66■■■□□ 2.66
PRKD2-210ENST00000597641 SCRIBQ14160 1630 aa31.5■■■□□ 2.63
PRKD2-210ENST00000597641 SHROOM4Q9ULL8 1493 aa31.35■■■□□ 2.61
PRKD2-210ENST00000597641 CC2D2AQ9P2K1 1620 aa31.3■■■□□ 2.6
PRKD2-210ENST00000597641 EIF4G1Q04637 1599 aaKnown RBP31.18■■■□□ 2.58
PRKD2-210ENST00000597641 CECR2Q9BXF3 1484 aa31.16■■■□□ 2.58
PRKD2-210ENST00000597641 NCAPD3P42695 1498 aa30.11■■■□□ 2.41
PRKD2-210ENST00000597641 ATAD2BQ9ULI0 1458 aa30.05■■■□□ 2.4
PRKD2-210ENST00000597641 SMARCA4P51532 1647 aa30.02■■■□□ 2.4
PRKD2-210ENST00000597641 DNAJC5Q9H3Z4 198 aa29.91■■■□□ 2.38
PRKD2-210ENST00000597641 SMARCA2P51531 1590 aa29.88■■■□□ 2.37
PRKD2-210ENST00000597641 HMGXB3Q12766 1538 aa29.87■■■□□ 2.37
PRKD2-210ENST00000597641 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
PRKD2-210ENST00000597641 NESP48681 1621 aa29.79■■■□□ 2.36
PRKD2-210ENST00000597641 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
PRKD2-210ENST00000597641 CUX2O14529 1486 aa29.77■■■□□ 2.36
PRKD2-210ENST00000597641 BAZ1BQ9UIG0 1483 aaKnown RBP29.7■■■□□ 2.35
PRKD2-210ENST00000597641 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
PRKD2-210ENST00000597641 MROH2BQ7Z745 1585 aa29.67■■■□□ 2.34
PRKD2-210ENST00000597641 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
PRKD2-210ENST00000597641 LAMC3Q9Y6N6 1575 aa29.43■■■□□ 2.3
PRKD2-210ENST00000597641 KIF21AQ7Z4S6 1674 aa29.42■■■□□ 2.3
PRKD2-210ENST00000597641 WIZO95785 1651 aa29.34■■■□□ 2.29
PRKD2-210ENST00000597641 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.27
PRKD2-210ENST00000597641 CADPSQ9ULU8 1353 aa29.18■■■□□ 2.26
PRKD2-210ENST00000597641 MRC2Q9UBG0 1479 aa29.03■■■□□ 2.24
PRKD2-210ENST00000597641 WDR62O43379 1518 aa28.99■■■□□ 2.23
PRKD2-210ENST00000597641 RSF1Q96T23 1441 aaPredicted RBP28.97■■■□□ 2.23
PRKD2-210ENST00000597641 CEP164Q9UPV0 1460 aa28.88■■■□□ 2.21
PRKD2-210ENST00000597641 FANCD2Q9BXW9 1451 aa28.87■■■□□ 2.21
PRKD2-210ENST00000597641 TOP2AP11388 1531 aaKnown RBP28.86■■■□□ 2.21
PRKD2-210ENST00000597641 CFTRP13569 1480 aa28.85■■■□□ 2.21
PRKD2-210ENST00000597641 URB2Q14146 1524 aaKnown RBP28.71■■■□□ 2.19
PRKD2-210ENST00000597641 PRDM2Q13029 1718 aa28.65■■■□□ 2.18
PRKD2-210ENST00000597641 TRIM41Q8WV44 630 aa28.58■■■□□ 2.17
PRKD2-210ENST00000597641 CCDC88BA6NC98 1476 aa28.58■■■□□ 2.17
PRKD2-210ENST00000597641 ZNF608Q9ULD9 1512 aaPredicted RBP28.39■■■□□ 2.14
PRKD2-210ENST00000597641 OSCARQ8IYS5 282 aa28.39■■■□□ 2.14
PRKD2-210ENST00000597641 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
PRKD2-210ENST00000597641 IFT140Q96RY7 1462 aa28.29■■■□□ 2.12
PRKD2-210ENST00000597641 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
PRKD2-210ENST00000597641 EIF4G3O43432 1585 aaKnown RBP28.2■■■□□ 2.1
PRKD2-210ENST00000597641 RIMBP3CA6NJZ7 1639 aa28.18■■■□□ 2.1
PRKD2-210ENST00000597641 RIMBP3BA6NNM3 1639 aa28.18■■■□□ 2.1
PRKD2-210ENST00000597641 RIMBP3Q9UFD9 1639 aa28.18■■■□□ 2.1
PRKD2-210ENST00000597641 TARBP1Q13395 1621 aaKnown RBP28.15■■■□□ 2.1
PRKD2-210ENST00000597641 ABCC8Q09428 1581 aa28.14■■■□□ 2.1
PRKD2-210ENST00000597641 AQRO60306 1485 aaKnown RBP eCLIP28.08■■■□□ 2.096e-7■■■■■ 27.8
PRKD2-210ENST00000597641 CHD1O14646 1710 aa28.06■■■□□ 2.08
PRKD2-210ENST00000597641 POLA1P09884 1462 aaPredicted RBP28.05■■■□□ 2.08
PRKD2-210ENST00000597641 ARHGEF11O15085 1522 aa28.03■■■□□ 2.08
PRKD2-210ENST00000597641 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
PRKD2-210ENST00000597641 TDRD9Q8NDG6 1382 aaKnown RBP27.87■■■□□ 2.05
PRKD2-210ENST00000597641 SOGA1O94964 1423 aa27.87■■■□□ 2.05
PRKD2-210ENST00000597641 CUX1P39880 1505 aa27.87■■■□□ 2.05
PRKD2-210ENST00000597641 FGD5Q6ZNL6 1462 aa27.86■■■□□ 2.05
PRKD2-210ENST00000597641 FBLN2P98095 1184 aa27.83■■■□□ 2.05
PRKD2-210ENST00000597641 CYB5RLQ6IPT4 315 aa27.8■■■□□ 2.04
PRKD2-210ENST00000597641 ARAP1Q96P48 1450 aa27.78■■■□□ 2.04
PRKD2-210ENST00000597641 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.04
PRKD2-210ENST00000597641 WDR97A6NE52 1622 aa27.74■■■□□ 2.03
PRKD2-210ENST00000597641 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
PRKD2-210ENST00000597641 PBRM1Q86U86 1689 aa27.63■■■□□ 2.01
PRKD2-210ENST00000597641 GRIN2BQ13224 1484 aa27.62■■■□□ 2.01
PRKD2-210ENST00000597641 MAGI1Q96QZ7 1491 aaPredicted RBP27.62■■■□□ 2.01
PRKD2-210ENST00000597641 SUPT5HO00267 1087 aaKnown RBP27.6■■■□□ 2.01
PRKD2-210ENST00000597641 CHMP7Q8WUX9 453 aaPredicted RBP27.57■■■□□ 2
PRKD2-210ENST00000597641 SYNJ1O43426 1573 aa27.56■■■□□ 2
PRKD2-210ENST00000597641 SYNJ2O15056 1496 aa27.55■■■□□ 2
PRKD2-210ENST00000597641 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
PRKD2-210ENST00000597641 ABCA5Q8WWZ7 1642 aa27.54■■■□□ 2
PRKD2-210ENST00000597641 ABCA10Q8WWZ4 1543 aa27.51■■■□□ 2
PRKD2-210ENST00000597641 TRHP20396 242 aaPredicted RBP27.45■■□□□ 1.98
PRKD2-210ENST00000597641 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
PRKD2-210ENST00000597641 TOP2BQ02880 1626 aa27.35■■□□□ 1.97
PRKD2-210ENST00000597641 ERCC6L2Q5T890 1561 aa27.34■■□□□ 1.97
PRKD2-210ENST00000597641 ADAMTS12P58397 1594 aa27.32■■□□□ 1.96
PRKD2-210ENST00000597641 WRNQ14191 1432 aaPredicted RBP eCLIP27.32■■□□□ 1.96
PRKD2-210ENST00000597641 GRIN2AQ12879 1464 aa27.3■■□□□ 1.96
PRKD2-210ENST00000597641 CEP170Q5SW79 1584 aa27.28■■□□□ 1.96
PRKD2-210ENST00000597641 NUP160Q12769 1436 aa27.23■■□□□ 1.95
PRKD2-210ENST00000597641 SHROOM2Q13796 1616 aa27.16■■□□□ 1.94
PRKD2-210ENST00000597641 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
PRKD2-210ENST00000597641 ERICH3Q5RHP9 1530 aa27.14■■□□□ 1.94
PRKD2-210ENST00000597641 PRG4Q92954 1404 aaPredicted RBP26.95■■□□□ 1.9
PRKD2-210ENST00000597641 RUSC2Q8N2Y8 1516 aa26.94■■□□□ 1.9
PRKD2-210ENST00000597641 KIF13AQ9H1H9 1805 aa26.93■■□□□ 1.9
PRKD2-210ENST00000597641 JPH4Q96JJ6 628 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms