RNA–Protein interactions for RNA: ENST00000597589.5

PRKD2-209, Transcript of protein kinase D2, humanhuman

TSL 5

Gene PRKD2, Length 1,682 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-209ENST00000597589 NISCHQ9Y2I1 1504 aa55.66■■■■■ 6.5
PRKD2-209ENST00000597589 CCDC180Q9P1Z9 1646 aa48.57■■■■■ 5.37
PRKD2-209ENST00000597589 ZCCHC6Q5VYS8 1495 aaKnown RBP46.82■■■■■ 5.08
PRKD2-209ENST00000597589 DCAF1Q9Y4B6 1507 aa46.11■■■■■ 4.97
PRKD2-209ENST00000597589 DCAF8L2P0C7V8 631 aa45.67■■■■■ 4.9
PRKD2-209ENST00000597589 ABCC9O60706 1549 aa45.57■■■■■ 4.89
PRKD2-209ENST00000597589 MYO15BQ96JP2 1530 aa45.52■■■■■ 4.88
PRKD2-209ENST00000597589 SHROOM4Q9ULL8 1493 aa45.33■■■■■ 4.85
PRKD2-209ENST00000597589 NACADO15069 1562 aa45.14■■■■■ 4.82
PRKD2-209ENST00000597589 RB1CC1Q8TDY2 1594 aa44.7■■■■■ 4.75
PRKD2-209ENST00000597589 SCRIBQ14160 1630 aa44.56■■■■■ 4.72
PRKD2-209ENST00000597589 UNC13AQ9UPW8 1703 aa43.87■■■■■ 4.61
PRKD2-209ENST00000597589 SUPT5HO00267 1087 aaKnown RBP43.68■■■■■ 4.58
PRKD2-209ENST00000597589 BICRAQ9NZM4 1560 aa43.34■■■■■ 4.53
PRKD2-209ENST00000597589 RSF1Q96T23 1441 aaPredicted RBP43.2■■■■■ 4.51
PRKD2-209ENST00000597589 CECR2Q9BXF3 1484 aa43.16■■■■■ 4.5
PRKD2-209ENST00000597589 BAZ1AQ9NRL2 1556 aaPredicted RBP42.99■■■■■ 4.47
PRKD2-209ENST00000597589 MROH2BQ7Z745 1585 aa42.97■■■■■ 4.47
PRKD2-209ENST00000597589 PABPN1Q86U42 306 aaKnown RBP eCLIP42.94■■■■■ 4.46
PRKD2-209ENST00000597589 SMARCA4P51532 1647 aa42.78■■■■■ 4.44
PRKD2-209ENST00000597589 WIZO95785 1651 aa42.66■■■■■ 4.42
PRKD2-209ENST00000597589 PEG3Q9GZU2 1588 aa42.3■■■■■ 4.36
PRKD2-209ENST00000597589 TOP2AP11388 1531 aaKnown RBP42.26■■■■■ 4.36
PRKD2-209ENST00000597589 SMARCA2P51531 1590 aa42.03■■■■■ 4.32
PRKD2-209ENST00000597589 EIF4G1Q04637 1599 aaKnown RBP42.01■■■■■ 4.32
PRKD2-209ENST00000597589 CHIC1Q5VXU3 224 aa41.99■■■■■ 4.31
PRKD2-209ENST00000597589 ATAD2BQ9ULI0 1458 aa41.99■■■■■ 4.31
PRKD2-209ENST00000597589 CCDC88BA6NC98 1476 aa41.76■■■■■ 4.28
PRKD2-209ENST00000597589 BAZ1BQ9UIG0 1483 aaKnown RBP41.76■■■■■ 4.28
PRKD2-209ENST00000597589 HMGXB3Q12766 1538 aa41.63■■■■■ 4.26
PRKD2-209ENST00000597589 NCAPD3P42695 1498 aa41.62■■■■■ 4.25
PRKD2-209ENST00000597589 CC2D2AQ9P2K1 1620 aa41.34■■■■■ 4.21
PRKD2-209ENST00000597589 TRIM41Q8WV44 630 aa41.12■■■■■ 4.17
PRKD2-209ENST00000597589 ABCC8Q09428 1581 aa40.92■■■■■ 4.14
PRKD2-209ENST00000597589 CFTRP13569 1480 aa40.74■■■■■ 4.11
PRKD2-209ENST00000597589 PRDM2Q13029 1718 aa40.69■■■■■ 4.11
PRKD2-209ENST00000597589 WRNQ14191 1432 aaPredicted RBP eCLIP40.66■■■■■ 4.1
PRKD2-209ENST00000597589 CADPSQ9ULU8 1353 aa40.53■■■■■ 4.08
PRKD2-209ENST00000597589 SYNJ1O43426 1573 aa40.52■■■■■ 4.08
PRKD2-209ENST00000597589 TOP2BQ02880 1626 aa40.39■■■■■ 4.06
PRKD2-209ENST00000597589 BIVM-ERCC5R4GMW8 1640 aa40.37■■■■■ 4.05
PRKD2-209ENST00000597589 LOC105371045A0A1W2PR82 267 aa40.31■■■■■ 4.04
PRKD2-209ENST00000597589 FAM9AQ8IZU1 332 aaPredicted RBP40.29■■■■■ 4.04
PRKD2-209ENST00000597589 EEA1Q15075 1411 aa40.24■■■■■ 4.03
PRKD2-209ENST00000597589 LAMC3Q9Y6N6 1575 aa40.22■■■■■ 4.03
PRKD2-209ENST00000597589 CUX1P39880 1505 aa40.19■■■■■ 4.02
PRKD2-209ENST00000597589 SOGA1O94964 1423 aa40.16■■■■■ 4.02
PRKD2-209ENST00000597589 FANCD2Q9BXW9 1451 aa40.09■■■■■ 4.01
PRKD2-209ENST00000597589 NESP48681 1621 aa40.08■■■■■ 4.01
PRKD2-209ENST00000597589 DNAJC5BQ9UF47 199 aa40.07■■■■■ 4
PRKD2-209ENST00000597589 RUSC2Q8N2Y8 1516 aa39.99■■■■□ 3.99
PRKD2-209ENST00000597589 CSRNP3Q8WYN3 585 aa39.88■■■■□ 3.97
PRKD2-209ENST00000597589 PDS5BQ9NTI5 1447 aa39.84■■■■□ 3.97
PRKD2-209ENST00000597589 CEP164Q9UPV0 1460 aa39.83■■■■□ 3.97
PRKD2-209ENST00000597589 DNMBPQ6XZF7 1577 aa39.82■■■■□ 3.96
PRKD2-209ENST00000597589 KIF21BO75037 1637 aa39.73■■■■□ 3.95
PRKD2-209ENST00000597589 FGD5Q6ZNL6 1462 aa39.71■■■■□ 3.95
PRKD2-209ENST00000597589 KIF21AQ7Z4S6 1674 aa39.7■■■■□ 3.95
PRKD2-209ENST00000597589 TOPBP1Q92547 1522 aa39.69■■■■□ 3.94
PRKD2-209ENST00000597589 GOLGA3Q08378 1498 aa39.64■■■■□ 3.94
PRKD2-209ENST00000597589 EHMT2Q96KQ7 1210 aa39.64■■■■□ 3.94
PRKD2-209ENST00000597589 KIF27Q86VH2 1401 aa39.62■■■■□ 3.93
PRKD2-209ENST00000597589 URB2Q14146 1524 aaKnown RBP39.58■■■■□ 3.93
PRKD2-209ENST00000597589 TNIKQ9UKE5 1360 aa39.54■■■■□ 3.92
PRKD2-209ENST00000597589 POLA1P09884 1462 aaPredicted RBP39.51■■■■□ 3.91
PRKD2-209ENST00000597589 CUX2O14529 1486 aa39.46■■■■□ 3.91
PRKD2-209ENST00000597589 PRXQ9BXM0 1461 aa39.43■■■■□ 3.9
PRKD2-209ENST00000597589 ERICH3Q5RHP9 1530 aa39.43■■■■□ 3.9
PRKD2-209ENST00000597589 ABCA10Q8WWZ4 1543 aa39.41■■■■□ 3.9
PRKD2-209ENST00000597589 RAPGEF2Q9Y4G8 1499 aa39.37■■■■□ 3.89
PRKD2-209ENST00000597589 WDR97A6NE52 1622 aa39.33■■■■□ 3.89
PRKD2-209ENST00000597589 MRC2Q9UBG0 1479 aa39.33■■■■□ 3.89
PRKD2-209ENST00000597589 UBTFP17480 764 aaKnown RBP39.33■■■■□ 3.89
PRKD2-209ENST00000597589 RAD54L2Q9Y4B4 1467 aa39.32■■■■□ 3.89
PRKD2-209ENST00000597589 CEP162Q5TB80 1403 aa39.32■■■■□ 3.88
PRKD2-209ENST00000597589 IGF1RP08069 1367 aa39.22■■■■□ 3.87
PRKD2-209ENST00000597589 WDR62O43379 1518 aa39.16■■■■□ 3.86
PRKD2-209ENST00000597589 TARBP1Q13395 1621 aaKnown RBP39.13■■■■□ 3.85
PRKD2-209ENST00000597589 ABCA5Q8WWZ7 1642 aa39.11■■■■□ 3.85
PRKD2-209ENST00000597589 ERCC6Q03468 1493 aa39.08■■■■□ 3.85
PRKD2-209ENST00000597589 CUL7Q14999 1698 aa39.04■■■■□ 3.84
PRKD2-209ENST00000597589 CARMIL1Q5VZK9 1371 aa39.03■■■■□ 3.84
PRKD2-209ENST00000597589 THOC2Q8NI27 1593 aaKnown RBP39.01■■■■□ 3.84
PRKD2-209ENST00000597589 CLIP1P30622 1438 aa38.98■■■■□ 3.83
PRKD2-209ENST00000597589 GAPVD1Q14C86 1478 aa38.94■■■■□ 3.82
PRKD2-209ENST00000597589 TDRD9Q8NDG6 1382 aaKnown RBP38.89■■■■□ 3.82
PRKD2-209ENST00000597589 IFT140Q96RY7 1462 aa38.89■■■■□ 3.82
PRKD2-209ENST00000597589 PBRM1Q86U86 1689 aa38.8■■■■□ 3.8
PRKD2-209ENST00000597589 VPS8Q8N3P4 1428 aa38.69■■■■□ 3.78
PRKD2-209ENST00000597589 TRIM26Q12899 539 aaPredicted RBP38.68■■■■□ 3.78
PRKD2-209ENST00000597589 CTTNBP2Q8WZ74 1663 aa38.64■■■■□ 3.78
PRKD2-209ENST00000597589 AQRO60306 1485 aaKnown RBP eCLIP38.64■■■■□ 3.781e-7■■■□□ 17
PRKD2-209ENST00000597589 PCGF6Q9BYE7 350 aa38.63■■■■□ 3.77
PRKD2-209ENST00000597589 GRIN2BQ13224 1484 aa38.63■■■■□ 3.77
PRKD2-209ENST00000597589 ZNF608Q9ULD9 1512 aaPredicted RBP38.6■■■■□ 3.77
PRKD2-209ENST00000597589 ARAP1Q96P48 1450 aa38.6■■■■□ 3.77
PRKD2-209ENST00000597589 ADAMTS12P58397 1594 aa38.57■■■■□ 3.77
PRKD2-209ENST00000597589 EIF4G3O43432 1585 aaKnown RBP38.56■■■■□ 3.76
PRKD2-209ENST00000597589 ARHGAP35Q9NRY4 1499 aa38.56■■■■□ 3.76
PRKD2-209ENST00000597589 RANGAP1P46060 587 aaPredicted RBP38.55■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms