RNA–Protein interactions for RNA: ENST00000597476.5

RAB4B-204, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB4B, Length 1,982 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-204ENST00000597476 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
RAB4B-204ENST00000597476 CCDC180Q9P1Z9 1646 aa28.12■■■□□ 2.09
RAB4B-204ENST00000597476 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
RAB4B-204ENST00000597476 DCAF8L2P0C7V8 631 aa26.8■■□□□ 1.88
RAB4B-204ENST00000597476 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
RAB4B-204ENST00000597476 DCAF1Q9Y4B6 1507 aa26.68■■□□□ 1.86
RAB4B-204ENST00000597476 ABCC9O60706 1549 aa26.65■■□□□ 1.86
RAB4B-204ENST00000597476 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
RAB4B-204ENST00000597476 NACADO15069 1562 aa26.15■■□□□ 1.78
RAB4B-204ENST00000597476 SCRIBQ14160 1630 aa26.05■■□□□ 1.76
RAB4B-204ENST00000597476 RB1CC1Q8TDY2 1594 aa25.91■■□□□ 1.74
RAB4B-204ENST00000597476 SUPT5HO00267 1087 aaKnown RBP25.68■■□□□ 1.7
RAB4B-204ENST00000597476 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
RAB4B-204ENST00000597476 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
RAB4B-204ENST00000597476 BICRAQ9NZM4 1560 aa25.28■■□□□ 1.64
RAB4B-204ENST00000597476 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
RAB4B-204ENST00000597476 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.63
RAB4B-204ENST00000597476 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.61
RAB4B-204ENST00000597476 WIZO95785 1651 aa24.96■■□□□ 1.59
RAB4B-204ENST00000597476 BAZ1AQ9NRL2 1556 aaPredicted RBP24.96■■□□□ 1.59
RAB4B-204ENST00000597476 SMARCA4P51532 1647 aa24.91■■□□□ 1.58
RAB4B-204ENST00000597476 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
RAB4B-204ENST00000597476 TOP2AP11388 1531 aaKnown RBP24.59■■□□□ 1.53
RAB4B-204ENST00000597476 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
RAB4B-204ENST00000597476 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
RAB4B-204ENST00000597476 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
RAB4B-204ENST00000597476 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
RAB4B-204ENST00000597476 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
RAB4B-204ENST00000597476 BAZ1BQ9UIG0 1483 aaKnown RBP24.3■■□□□ 1.48
RAB4B-204ENST00000597476 NCAPD3P42695 1498 aa24.17■■□□□ 1.46
RAB4B-204ENST00000597476 HMGXB3Q12766 1538 aa24.14■■□□□ 1.45
RAB4B-204ENST00000597476 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
RAB4B-204ENST00000597476 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
RAB4B-204ENST00000597476 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
RAB4B-204ENST00000597476 LOC105371045A0A1W2PR82 267 aa23.79■■□□□ 1.4
RAB4B-204ENST00000597476 FAM9AQ8IZU1 332 aaPredicted RBP23.74■■□□□ 1.39
RAB4B-204ENST00000597476 SYNJ1O43426 1573 aa23.7■■□□□ 1.38
RAB4B-204ENST00000597476 CFTRP13569 1480 aa23.7■■□□□ 1.38
RAB4B-204ENST00000597476 WRNQ14191 1432 aaPredicted RBP eCLIP23.7■■□□□ 1.38
RAB4B-204ENST00000597476 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
RAB4B-204ENST00000597476 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
RAB4B-204ENST00000597476 CADPSQ9ULU8 1353 aa23.57■■□□□ 1.36
RAB4B-204ENST00000597476 SOGA1O94964 1423 aa23.56■■□□□ 1.36
RAB4B-204ENST00000597476 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
RAB4B-204ENST00000597476 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
RAB4B-204ENST00000597476 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
RAB4B-204ENST00000597476 NESP48681 1621 aa23.49■■□□□ 1.35
RAB4B-204ENST00000597476 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
RAB4B-204ENST00000597476 CUX1P39880 1505 aa23.48■■□□□ 1.35
RAB4B-204ENST00000597476 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
RAB4B-204ENST00000597476 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
RAB4B-204ENST00000597476 EEA1Q15075 1411 aa23.29■■□□□ 1.32
RAB4B-204ENST00000597476 CSRNP3Q8WYN3 585 aa23.27■■□□□ 1.32
RAB4B-204ENST00000597476 KIF21AQ7Z4S6 1674 aa23.17■■□□□ 1.3
RAB4B-204ENST00000597476 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
RAB4B-204ENST00000597476 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
RAB4B-204ENST00000597476 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
RAB4B-204ENST00000597476 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
RAB4B-204ENST00000597476 URB2Q14146 1524 aaKnown RBP23.11■■□□□ 1.29
RAB4B-204ENST00000597476 KIF21BO75037 1637 aa23.1■■□□□ 1.29
RAB4B-204ENST00000597476 PDS5BQ9NTI5 1447 aa23.09■■□□□ 1.29
RAB4B-204ENST00000597476 GOLGA3Q08378 1498 aa23.08■■□□□ 1.29
RAB4B-204ENST00000597476 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
RAB4B-204ENST00000597476 POLA1P09884 1462 aaPredicted RBP23.04■■□□□ 1.28
RAB4B-204ENST00000597476 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
RAB4B-204ENST00000597476 CUX2O14529 1486 aa23.03■■□□□ 1.28
RAB4B-204ENST00000597476 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
RAB4B-204ENST00000597476 TNIKQ9UKE5 1360 aa23.03■■□□□ 1.28
RAB4B-204ENST00000597476 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
RAB4B-204ENST00000597476 PRXQ9BXM0 1461 aa22.98■■□□□ 1.27
RAB4B-204ENST00000597476 CEP162Q5TB80 1403 aa22.98■■□□□ 1.27
RAB4B-204ENST00000597476 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
RAB4B-204ENST00000597476 WDR97A6NE52 1622 aa22.9■■□□□ 1.26
RAB4B-204ENST00000597476 IGF1RP08069 1367 aa22.9■■□□□ 1.26
RAB4B-204ENST00000597476 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.25
RAB4B-204ENST00000597476 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
RAB4B-204ENST00000597476 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
RAB4B-204ENST00000597476 ABCA5Q8WWZ7 1642 aa22.76■■□□□ 1.23
RAB4B-204ENST00000597476 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
RAB4B-204ENST00000597476 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
RAB4B-204ENST00000597476 WDR62O43379 1518 aa22.76■■□□□ 1.23
RAB4B-204ENST00000597476 CARMIL1Q5VZK9 1371 aa22.75■■□□□ 1.23
RAB4B-204ENST00000597476 CLIP1P30622 1438 aa22.75■■□□□ 1.23
RAB4B-204ENST00000597476 RANGAP1P46060 587 aaPredicted RBP22.74■■□□□ 1.23
RAB4B-204ENST00000597476 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
RAB4B-204ENST00000597476 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
RAB4B-204ENST00000597476 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
RAB4B-204ENST00000597476 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
RAB4B-204ENST00000597476 CUL7Q14999 1698 aa22.64■■□□□ 1.21
RAB4B-204ENST00000597476 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.212e-6■■□□□ 13
RAB4B-204ENST00000597476 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
RAB4B-204ENST00000597476 TRIM26Q12899 539 aaPredicted RBP22.6■■□□□ 1.21
RAB4B-204ENST00000597476 PBRM1Q86U86 1689 aa22.59■■□□□ 1.21
RAB4B-204ENST00000597476 ARAP1Q96P48 1450 aa22.59■■□□□ 1.21
RAB4B-204ENST00000597476 IFT140Q96RY7 1462 aa22.56■■□□□ 1.2
RAB4B-204ENST00000597476 VPS8Q8N3P4 1428 aa22.55■■□□□ 1.2
RAB4B-204ENST00000597476 ARHGAP35Q9NRY4 1499 aa22.54■■□□□ 1.2
RAB4B-204ENST00000597476 TTBK1Q5TCY1 1321 aaPredicted RBP22.5■■□□□ 1.19
RAB4B-204ENST00000597476 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
RAB4B-204ENST00000597476 CTTNBP2Q8WZ74 1663 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms