RNA–Protein interactions for RNA: ENST00000597370.5

TMEM143-206, Transcript of transmembrane protein 143, humanhuman

TSL 5

Gene TMEM143, Length 748 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-206ENST00000597370 NISCHQ9Y2I1 1504 aa37.44■■■■□ 3.58
TMEM143-206ENST00000597370 CCDC180Q9P1Z9 1646 aa33.69■■■□□ 2.98
TMEM143-206ENST00000597370 ABCC9O60706 1549 aa33.24■■■□□ 2.91
TMEM143-206ENST00000597370 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
TMEM143-206ENST00000597370 NACADO15069 1562 aa31.76■■■□□ 2.67
TMEM143-206ENST00000597370 MYO15BQ96JP2 1530 aa31.52■■■□□ 2.64
TMEM143-206ENST00000597370 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
TMEM143-206ENST00000597370 DCAF1Q9Y4B6 1507 aa31.1■■■□□ 2.57
TMEM143-206ENST00000597370 ZCCHC6Q5VYS8 1495 aaKnown RBP31.1■■■□□ 2.57
TMEM143-206ENST00000597370 DCAF8L2P0C7V8 631 aa31.09■■■□□ 2.57
TMEM143-206ENST00000597370 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
TMEM143-206ENST00000597370 BICRAQ9NZM4 1560 aa30.97■■■□□ 2.55
TMEM143-206ENST00000597370 PABPN1Q86U42 306 aaKnown RBP eCLIP30.85■■■□□ 2.53
TMEM143-206ENST00000597370 SHROOM4Q9ULL8 1493 aa30.77■■■□□ 2.52
TMEM143-206ENST00000597370 SCRIBQ14160 1630 aa30.44■■■□□ 2.46
TMEM143-206ENST00000597370 EIF4G1Q04637 1599 aaKnown RBP30.18■■■□□ 2.42
TMEM143-206ENST00000597370 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
TMEM143-206ENST00000597370 CECR2Q9BXF3 1484 aa30.02■■■□□ 2.4
TMEM143-206ENST00000597370 NCAPD3P42695 1498 aa29.29■■■□□ 2.28
TMEM143-206ENST00000597370 SMARCA4P51532 1647 aa29.19■■■□□ 2.26
TMEM143-206ENST00000597370 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
TMEM143-206ENST00000597370 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
TMEM143-206ENST00000597370 SMARCA2P51531 1590 aa29.14■■■□□ 2.26
TMEM143-206ENST00000597370 BAZ1AQ9NRL2 1556 aaPredicted RBP29.09■■■□□ 2.25
TMEM143-206ENST00000597370 PEG3Q9GZU2 1588 aa29.05■■■□□ 2.24
TMEM143-206ENST00000597370 BAZ1BQ9UIG0 1483 aaKnown RBP28.84■■■□□ 2.21
TMEM143-206ENST00000597370 CUX2O14529 1486 aa28.83■■■□□ 2.21
TMEM143-206ENST00000597370 MROH2BQ7Z745 1585 aa28.77■■■□□ 2.2
TMEM143-206ENST00000597370 ERCC6Q03468 1493 aa28.72■■■□□ 2.19
TMEM143-206ENST00000597370 LAMC3Q9Y6N6 1575 aa28.64■■■□□ 2.18
TMEM143-206ENST00000597370 NESP48681 1621 aa28.61■■■□□ 2.17
TMEM143-206ENST00000597370 DNAJC5Q9H3Z4 198 aa28.53■■■□□ 2.16
TMEM143-206ENST00000597370 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
TMEM143-206ENST00000597370 WIZO95785 1651 aa28.43■■■□□ 2.14
TMEM143-206ENST00000597370 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
TMEM143-206ENST00000597370 KIF21AQ7Z4S6 1674 aa28.35■■■□□ 2.13
TMEM143-206ENST00000597370 CADPSQ9ULU8 1353 aa28.33■■■□□ 2.13
TMEM143-206ENST00000597370 RSF1Q96T23 1441 aaPredicted RBP28.23■■■□□ 2.11
TMEM143-206ENST00000597370 TOP2AP11388 1531 aaKnown RBP28.17■■■□□ 2.1
TMEM143-206ENST00000597370 WDR62O43379 1518 aa28.13■■■□□ 2.09
TMEM143-206ENST00000597370 MRC2Q9UBG0 1479 aa28.13■■■□□ 2.09
TMEM143-206ENST00000597370 CFTRP13569 1480 aa28.09■■■□□ 2.09
TMEM143-206ENST00000597370 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
TMEM143-206ENST00000597370 FANCD2Q9BXW9 1451 aa27.98■■■□□ 2.07
TMEM143-206ENST00000597370 PRDM2Q13029 1718 aa27.92■■■□□ 2.06
TMEM143-206ENST00000597370 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
TMEM143-206ENST00000597370 CCDC88BA6NC98 1476 aa27.75■■■□□ 2.03
TMEM143-206ENST00000597370 ABCC8Q09428 1581 aa27.53■■■□□ 2
TMEM143-206ENST00000597370 IFT140Q96RY7 1462 aa27.5■■□□□ 1.99
TMEM143-206ENST00000597370 TOPBP1Q92547 1522 aa27.49■■□□□ 1.99
TMEM143-206ENST00000597370 DNMBPQ6XZF7 1577 aa27.45■■□□□ 1.99
TMEM143-206ENST00000597370 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
TMEM143-206ENST00000597370 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
TMEM143-206ENST00000597370 TARBP1Q13395 1621 aaKnown RBP27.3■■□□□ 1.96
TMEM143-206ENST00000597370 EIF4G3O43432 1585 aaKnown RBP27.29■■□□□ 1.96
TMEM143-206ENST00000597370 POLA1P09884 1462 aaPredicted RBP27.22■■□□□ 1.95
TMEM143-206ENST00000597370 WDR97A6NE52 1622 aa27.19■■□□□ 1.94
TMEM143-206ENST00000597370 RIMBP3CA6NJZ7 1639 aa27.07■■□□□ 1.92
TMEM143-206ENST00000597370 RIMBP3BA6NNM3 1639 aa27.07■■□□□ 1.92
TMEM143-206ENST00000597370 RIMBP3Q9UFD9 1639 aa27.07■■□□□ 1.92
TMEM143-206ENST00000597370 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.92
TMEM143-206ENST00000597370 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
TMEM143-206ENST00000597370 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
TMEM143-206ENST00000597370 CUX1P39880 1505 aa27.05■■□□□ 1.92
TMEM143-206ENST00000597370 CHD1O14646 1710 aa27.04■■□□□ 1.92
TMEM143-206ENST00000597370 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
TMEM143-206ENST00000597370 SOGA1O94964 1423 aa27.02■■□□□ 1.92
TMEM143-206ENST00000597370 RAD54L2Q9Y4B4 1467 aa27■■□□□ 1.91
TMEM143-206ENST00000597370 ARHGEF11O15085 1522 aa27■■□□□ 1.91
TMEM143-206ENST00000597370 MAGI1Q96QZ7 1491 aaPredicted RBP26.9■■□□□ 1.9
TMEM143-206ENST00000597370 TDRD9Q8NDG6 1382 aaKnown RBP26.88■■□□□ 1.89
TMEM143-206ENST00000597370 SNAPC4Q5SXM2 1469 aa26.86■■□□□ 1.89
TMEM143-206ENST00000597370 GRIN2BQ13224 1484 aa26.85■■□□□ 1.89
TMEM143-206ENST00000597370 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
TMEM143-206ENST00000597370 CLASP1Q7Z460 1538 aa26.81■■□□□ 1.88
TMEM143-206ENST00000597370 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
TMEM143-206ENST00000597370 PBRM1Q86U86 1689 aa26.79■■□□□ 1.88
TMEM143-206ENST00000597370 SYNJ2O15056 1496 aa26.77■■□□□ 1.88
TMEM143-206ENST00000597370 SYNJ1O43426 1573 aa26.76■■□□□ 1.87
TMEM143-206ENST00000597370 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
TMEM143-206ENST00000597370 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
TMEM143-206ENST00000597370 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
TMEM143-206ENST00000597370 TOP2BQ02880 1626 aa26.72■■□□□ 1.87
TMEM143-206ENST00000597370 FBLN2P98095 1184 aa26.69■■□□□ 1.86
TMEM143-206ENST00000597370 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
TMEM143-206ENST00000597370 CHMP7Q8WUX9 453 aaPredicted RBP26.64■■□□□ 1.86
TMEM143-206ENST00000597370 CYB5RLQ6IPT4 315 aa26.57■■□□□ 1.84
TMEM143-206ENST00000597370 ADAMTS12P58397 1594 aa26.55■■□□□ 1.84
TMEM143-206ENST00000597370 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
TMEM143-206ENST00000597370 GRIN2AQ12879 1464 aa26.51■■□□□ 1.83
TMEM143-206ENST00000597370 NUP160Q12769 1436 aa26.48■■□□□ 1.83
TMEM143-206ENST00000597370 FHAD1B1AJZ9 1412 aa26.44■■□□□ 1.82
TMEM143-206ENST00000597370 CEP170Q5SW79 1584 aa26.41■■□□□ 1.82
TMEM143-206ENST00000597370 SHROOM2Q13796 1616 aa26.4■■□□□ 1.82
TMEM143-206ENST00000597370 ERCC6L2Q5T890 1561 aa26.26■■□□□ 1.79
TMEM143-206ENST00000597370 RUSC2Q8N2Y8 1516 aa26.19■■□□□ 1.78
TMEM143-206ENST00000597370 TRHP20396 242 aaPredicted RBP26.18■■□□□ 1.78
TMEM143-206ENST00000597370 CUL7Q14999 1698 aa26.15■■□□□ 1.78
TMEM143-206ENST00000597370 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
TMEM143-206ENST00000597370 IGF1RP08069 1367 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms