RNA–Protein interactions for RNA: ENST00000597333.1

PAFAH1B3-206, Transcript of platelet activating factor acetylhydrolase 1b catalytic subunit 3, humanhuman

TSL 2

Gene PAFAH1B3, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAFAH1B3-206ENST00000597333 NISCHQ9Y2I1 1504 aa35.89■■■■□ 3.34
PAFAH1B3-206ENST00000597333 CCDC180Q9P1Z9 1646 aa31.98■■■□□ 2.71
PAFAH1B3-206ENST00000597333 ABCC9O60706 1549 aa31.64■■■□□ 2.66
PAFAH1B3-206ENST00000597333 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
PAFAH1B3-206ENST00000597333 DCAF8L2P0C7V8 631 aa30.24■■■□□ 2.43
PAFAH1B3-206ENST00000597333 NACADO15069 1562 aa30.11■■■□□ 2.41
PAFAH1B3-206ENST00000597333 ZCCHC6Q5VYS8 1495 aaKnown RBP29.84■■■□□ 2.37
PAFAH1B3-206ENST00000597333 MYO15BQ96JP2 1530 aa29.78■■■□□ 2.36
PAFAH1B3-206ENST00000597333 UNC13AQ9UPW8 1703 aa29.61■■■□□ 2.33
PAFAH1B3-206ENST00000597333 DCAF1Q9Y4B6 1507 aa29.6■■■□□ 2.33
PAFAH1B3-206ENST00000597333 PABPN1Q86U42 306 aaKnown RBP eCLIP29.55■■■□□ 2.32
PAFAH1B3-206ENST00000597333 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
PAFAH1B3-206ENST00000597333 SCRIBQ14160 1630 aa29.29■■■□□ 2.28
PAFAH1B3-206ENST00000597333 DNAJC5BQ9UF47 199 aa29.23■■■□□ 2.27
PAFAH1B3-206ENST00000597333 SHROOM4Q9ULL8 1493 aa28.89■■■□□ 2.22
PAFAH1B3-206ENST00000597333 EIF4G1Q04637 1599 aaKnown RBP28.6■■■□□ 2.17
PAFAH1B3-206ENST00000597333 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
PAFAH1B3-206ENST00000597333 CECR2Q9BXF3 1484 aa28.4■■■□□ 2.14
PAFAH1B3-206ENST00000597333 SMARCA4P51532 1647 aa27.92■■■□□ 2.06
PAFAH1B3-206ENST00000597333 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
PAFAH1B3-206ENST00000597333 ATAD2BQ9ULI0 1458 aa27.81■■■□□ 2.04
PAFAH1B3-206ENST00000597333 NCAPD3P42695 1498 aa27.78■■■□□ 2.04
PAFAH1B3-206ENST00000597333 SMARCA2P51531 1590 aa27.74■■■□□ 2.03
PAFAH1B3-206ENST00000597333 MROH2BQ7Z745 1585 aa27.7■■■□□ 2.03
PAFAH1B3-206ENST00000597333 HMGXB3Q12766 1538 aa27.63■■■□□ 2.01
PAFAH1B3-206ENST00000597333 BAZ1BQ9UIG0 1483 aaKnown RBP27.6■■■□□ 2.01
PAFAH1B3-206ENST00000597333 PEG3Q9GZU2 1588 aa27.57■■■□□ 2
PAFAH1B3-206ENST00000597333 WIZO95785 1651 aa27.43■■□□□ 1.98
PAFAH1B3-206ENST00000597333 NESP48681 1621 aa27.3■■□□□ 1.96
PAFAH1B3-206ENST00000597333 ERCC6Q03468 1493 aa27.27■■□□□ 1.96
PAFAH1B3-206ENST00000597333 RSF1Q96T23 1441 aaPredicted RBP27.27■■□□□ 1.96
PAFAH1B3-206ENST00000597333 LAMC3Q9Y6N6 1575 aa27.12■■□□□ 1.93
PAFAH1B3-206ENST00000597333 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
PAFAH1B3-206ENST00000597333 CADPSQ9ULU8 1353 aa26.99■■□□□ 1.91
PAFAH1B3-206ENST00000597333 CUX2O14529 1486 aa26.97■■□□□ 1.91
PAFAH1B3-206ENST00000597333 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
PAFAH1B3-206ENST00000597333 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
PAFAH1B3-206ENST00000597333 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
PAFAH1B3-206ENST00000597333 CFTRP13569 1480 aa26.77■■□□□ 1.88
PAFAH1B3-206ENST00000597333 CCDC88BA6NC98 1476 aa26.76■■□□□ 1.87
PAFAH1B3-206ENST00000597333 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
PAFAH1B3-206ENST00000597333 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
PAFAH1B3-206ENST00000597333 CEP164Q9UPV0 1460 aa26.71■■□□□ 1.87
PAFAH1B3-206ENST00000597333 WDR62O43379 1518 aa26.61■■□□□ 1.85
PAFAH1B3-206ENST00000597333 PRDM2Q13029 1718 aa26.58■■□□□ 1.85
PAFAH1B3-206ENST00000597333 SUPT5HO00267 1087 aaKnown RBP26.53■■□□□ 1.84
PAFAH1B3-206ENST00000597333 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
PAFAH1B3-206ENST00000597333 DNAJC5Q9H3Z4 198 aa26.44■■□□□ 1.82
PAFAH1B3-206ENST00000597333 TOPBP1Q92547 1522 aa26.26■■□□□ 1.79
PAFAH1B3-206ENST00000597333 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.79
PAFAH1B3-206ENST00000597333 ABCC8Q09428 1581 aa26.17■■□□□ 1.78
PAFAH1B3-206ENST00000597333 IFT140Q96RY7 1462 aa26.13■■□□□ 1.77
PAFAH1B3-206ENST00000597333 ZNF608Q9ULD9 1512 aaPredicted RBP26.09■■□□□ 1.77
PAFAH1B3-206ENST00000597333 POLA1P09884 1462 aaPredicted RBP26.02■■□□□ 1.76
PAFAH1B3-206ENST00000597333 CUX1P39880 1505 aa25.99■■□□□ 1.75
PAFAH1B3-206ENST00000597333 TARBP1Q13395 1621 aaKnown RBP25.99■■□□□ 1.75
PAFAH1B3-206ENST00000597333 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
PAFAH1B3-206ENST00000597333 RAD54L2Q9Y4B4 1467 aa25.97■■□□□ 1.75
PAFAH1B3-206ENST00000597333 FGD5Q6ZNL6 1462 aa25.95■■□□□ 1.74
PAFAH1B3-206ENST00000597333 AQRO60306 1485 aaKnown RBP eCLIP25.92■■□□□ 1.74
PAFAH1B3-206ENST00000597333 SOGA1O94964 1423 aa25.92■■□□□ 1.74
PAFAH1B3-206ENST00000597333 OSCARQ8IYS5 282 aa25.85■■□□□ 1.73
PAFAH1B3-206ENST00000597333 TDRD9Q8NDG6 1382 aaKnown RBP25.84■■□□□ 1.73
PAFAH1B3-206ENST00000597333 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
PAFAH1B3-206ENST00000597333 FBLN2P98095 1184 aa25.72■■□□□ 1.71
PAFAH1B3-206ENST00000597333 WDR97A6NE52 1622 aa25.72■■□□□ 1.71
PAFAH1B3-206ENST00000597333 SYNJ1O43426 1573 aa25.72■■□□□ 1.71
PAFAH1B3-206ENST00000597333 CHD1O14646 1710 aa25.71■■□□□ 1.71
PAFAH1B3-206ENST00000597333 TOP2BQ02880 1626 aa25.68■■□□□ 1.7
PAFAH1B3-206ENST00000597333 BIVM-ERCC5R4GMW8 1640 aa25.68■■□□□ 1.7
PAFAH1B3-206ENST00000597333 SNAPC4Q5SXM2 1469 aa25.67■■□□□ 1.7
PAFAH1B3-206ENST00000597333 ABCA10Q8WWZ4 1543 aa25.63■■□□□ 1.69
PAFAH1B3-206ENST00000597333 GRIN2BQ13224 1484 aa25.62■■□□□ 1.69
PAFAH1B3-206ENST00000597333 TRIM41Q8WV44 630 aa25.62■■□□□ 1.69
PAFAH1B3-206ENST00000597333 GAPVD1Q14C86 1478 aa25.61■■□□□ 1.69
PAFAH1B3-206ENST00000597333 PBRM1Q86U86 1689 aa25.61■■□□□ 1.69
PAFAH1B3-206ENST00000597333 ABCA5Q8WWZ7 1642 aa25.58■■□□□ 1.69
PAFAH1B3-206ENST00000597333 MAGI1Q96QZ7 1491 aaPredicted RBP25.56■■□□□ 1.68
PAFAH1B3-206ENST00000597333 CHMP7Q8WUX9 453 aaPredicted RBP25.54■■□□□ 1.68
PAFAH1B3-206ENST00000597333 RIMBP3CA6NJZ7 1639 aa25.51■■□□□ 1.67
PAFAH1B3-206ENST00000597333 RIMBP3BA6NNM3 1639 aa25.51■■□□□ 1.67
PAFAH1B3-206ENST00000597333 RIMBP3Q9UFD9 1639 aa25.51■■□□□ 1.67
PAFAH1B3-206ENST00000597333 SYNJ2O15056 1496 aa25.48■■□□□ 1.67
PAFAH1B3-206ENST00000597333 ARHGEF11O15085 1522 aa25.46■■□□□ 1.67
PAFAH1B3-206ENST00000597333 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
PAFAH1B3-206ENST00000597333 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
PAFAH1B3-206ENST00000597333 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
PAFAH1B3-206ENST00000597333 GRIN2AQ12879 1464 aa25.31■■□□□ 1.64
PAFAH1B3-206ENST00000597333 FHAD1B1AJZ9 1412 aa25.29■■□□□ 1.64
PAFAH1B3-206ENST00000597333 CYB5RLQ6IPT4 315 aa25.28■■□□□ 1.64
PAFAH1B3-206ENST00000597333 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
PAFAH1B3-206ENST00000597333 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
PAFAH1B3-206ENST00000597333 KIF27Q86VH2 1401 aa25.2■■□□□ 1.62
PAFAH1B3-206ENST00000597333 NUP160Q12769 1436 aa25.17■■□□□ 1.62
PAFAH1B3-206ENST00000597333 IGF1RP08069 1367 aa25.11■■□□□ 1.61
PAFAH1B3-206ENST00000597333 ERCC6L2Q5T890 1561 aa25.08■■□□□ 1.61
PAFAH1B3-206ENST00000597333 CUL7Q14999 1698 aa25.07■■□□□ 1.6
PAFAH1B3-206ENST00000597333 SHROOM2Q13796 1616 aa25.01■■□□□ 1.59
PAFAH1B3-206ENST00000597333 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
PAFAH1B3-206ENST00000597333 CARMIL1Q5VZK9 1371 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms