RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 NISCHQ9Y2I1 1504 aa39.83■■■■□ 3.97
CHERP-206ENST00000597261 CCDC180Q9P1Z9 1646 aa35.25■■■■□ 3.23
CHERP-206ENST00000597261 ABCC9O60706 1549 aa34.68■■■■□ 3.14
CHERP-206ENST00000597261 DCAF8L2P0C7V8 631 aa33.4■■■□□ 2.94
CHERP-206ENST00000597261 NACADO15069 1562 aa33.29■■■□□ 2.92
CHERP-206ENST00000597261 RB1CC1Q8TDY2 1594 aa33.29■■■□□ 2.92
CHERP-206ENST00000597261 MYO15BQ96JP2 1530 aa33.13■■■□□ 2.89
CHERP-206ENST00000597261 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
CHERP-206ENST00000597261 DCAF1Q9Y4B6 1507 aa32.96■■■□□ 2.87
CHERP-206ENST00000597261 PABPN1Q86U42 306 aaKnown RBP eCLIP32.54■■■□□ 2.8
CHERP-206ENST00000597261 UNC13AQ9UPW8 1703 aa32.37■■■□□ 2.77
CHERP-206ENST00000597261 BICRAQ9NZM4 1560 aa32.32■■■□□ 2.76
CHERP-206ENST00000597261 SCRIBQ14160 1630 aa32.18■■■□□ 2.74
CHERP-206ENST00000597261 DNAJC5BQ9UF47 199 aa32.09■■■□□ 2.73
CHERP-206ENST00000597261 SHROOM4Q9ULL8 1493 aa31.97■■■□□ 2.71
CHERP-206ENST00000597261 EIF4G1Q04637 1599 aaKnown RBP31.45■■■□□ 2.63
CHERP-206ENST00000597261 CC2D2AQ9P2K1 1620 aa31.32■■■□□ 2.6
CHERP-206ENST00000597261 CECR2Q9BXF3 1484 aa31.2■■■□□ 2.58
CHERP-206ENST00000597261 NCAPD3P42695 1498 aa30.82■■■□□ 2.53
CHERP-206ENST00000597261 SMARCA4P51532 1647 aa30.81■■■□□ 2.52
CHERP-206ENST00000597261 BAZ1AQ9NRL2 1556 aaPredicted RBP30.81■■■□□ 2.52
CHERP-206ENST00000597261 ATAD2BQ9ULI0 1458 aa30.79■■■□□ 2.52
CHERP-206ENST00000597261 MROH2BQ7Z745 1585 aa30.68■■■□□ 2.5
CHERP-206ENST00000597261 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
CHERP-206ENST00000597261 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
CHERP-206ENST00000597261 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
CHERP-206ENST00000597261 BAZ1BQ9UIG0 1483 aaKnown RBP30.45■■■□□ 2.47
CHERP-206ENST00000597261 RSF1Q96T23 1441 aaPredicted RBP30.39■■■□□ 2.46
CHERP-206ENST00000597261 WIZO95785 1651 aa30.26■■■□□ 2.43
CHERP-206ENST00000597261 NESP48681 1621 aa30■■■□□ 2.39
CHERP-206ENST00000597261 TOP2AP11388 1531 aaKnown RBP29.96■■■□□ 2.39
CHERP-206ENST00000597261 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
CHERP-206ENST00000597261 LAMC3Q9Y6N6 1575 aa29.87■■■□□ 2.37
CHERP-206ENST00000597261 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
CHERP-206ENST00000597261 PDS5BQ9NTI5 1447 aa29.79■■■□□ 2.36
CHERP-206ENST00000597261 CCDC88BA6NC98 1476 aa29.72■■■□□ 2.35
CHERP-206ENST00000597261 CFTRP13569 1480 aa29.7■■■□□ 2.35
CHERP-206ENST00000597261 CUX2O14529 1486 aa29.61■■■□□ 2.33
CHERP-206ENST00000597261 SUPT5HO00267 1087 aaKnown RBP29.6■■■□□ 2.33
CHERP-206ENST00000597261 FANCD2Q9BXW9 1451 aa29.49■■■□□ 2.31
CHERP-206ENST00000597261 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
CHERP-206ENST00000597261 THOC2Q8NI27 1593 aaKnown RBP29.44■■■□□ 2.3
CHERP-206ENST00000597261 CEP164Q9UPV0 1460 aa29.42■■■□□ 2.3
CHERP-206ENST00000597261 MRC2Q9UBG0 1479 aa29.41■■■□□ 2.3
CHERP-206ENST00000597261 WDR62O43379 1518 aa29.29■■■□□ 2.28
CHERP-206ENST00000597261 URB2Q14146 1524 aaKnown RBP29.2■■■□□ 2.26
CHERP-206ENST00000597261 PRDM2Q13029 1718 aa29.15■■■□□ 2.26
CHERP-206ENST00000597261 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
CHERP-206ENST00000597261 TOPBP1Q92547 1522 aa29.01■■■□□ 2.23
CHERP-206ENST00000597261 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
CHERP-206ENST00000597261 DNMBPQ6XZF7 1577 aa28.92■■■□□ 2.22
CHERP-206ENST00000597261 IFT140Q96RY7 1462 aa28.86■■■□□ 2.21
CHERP-206ENST00000597261 CUX1P39880 1505 aa28.77■■■□□ 2.2
CHERP-206ENST00000597261 POLA1P09884 1462 aaPredicted RBP28.77■■■□□ 2.2
CHERP-206ENST00000597261 ZNF608Q9ULD9 1512 aaPredicted RBP28.74■■■□□ 2.19
CHERP-206ENST00000597261 SOGA1O94964 1423 aa28.73■■■□□ 2.19
CHERP-206ENST00000597261 RAD54L2Q9Y4B4 1467 aa28.67■■■□□ 2.18
CHERP-206ENST00000597261 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
CHERP-206ENST00000597261 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
CHERP-206ENST00000597261 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.171e-6■■■■■ 27.8
CHERP-206ENST00000597261 WRNQ14191 1432 aaPredicted RBP eCLIP28.6■■■□□ 2.17
CHERP-206ENST00000597261 TDRD9Q8NDG6 1382 aaKnown RBP28.57■■■□□ 2.16
CHERP-206ENST00000597261 OSCARQ8IYS5 282 aa28.54■■■□□ 2.16
CHERP-206ENST00000597261 EIF4G3O43432 1585 aaKnown RBP28.47■■■□□ 2.15
CHERP-206ENST00000597261 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
CHERP-206ENST00000597261 SYNJ1O43426 1573 aa28.44■■■□□ 2.14
CHERP-206ENST00000597261 ABCA10Q8WWZ4 1543 aa28.43■■■□□ 2.14
CHERP-206ENST00000597261 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
CHERP-206ENST00000597261 WDR97A6NE52 1622 aa28.4■■■□□ 2.14
CHERP-206ENST00000597261 GRIN2BQ13224 1484 aa28.34■■■□□ 2.13
CHERP-206ENST00000597261 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
CHERP-206ENST00000597261 FBLN2P98095 1184 aa28.29■■■□□ 2.12
CHERP-206ENST00000597261 SNAPC4Q5SXM2 1469 aa28.26■■■□□ 2.11
CHERP-206ENST00000597261 CHMP7Q8WUX9 453 aaPredicted RBP28.25■■■□□ 2.11
CHERP-206ENST00000597261 MAGI1Q96QZ7 1491 aaPredicted RBP28.24■■■□□ 2.11
CHERP-206ENST00000597261 ABCA5Q8WWZ7 1642 aa28.2■■■□□ 2.1
CHERP-206ENST00000597261 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
CHERP-206ENST00000597261 CHD1O14646 1710 aa28.06■■■□□ 2.08
CHERP-206ENST00000597261 PBRM1Q86U86 1689 aa28.06■■■□□ 2.08
CHERP-206ENST00000597261 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
CHERP-206ENST00000597261 FHAD1B1AJZ9 1412 aa28.03■■■□□ 2.08
CHERP-206ENST00000597261 IGF1RP08069 1367 aa28.03■■■□□ 2.08
CHERP-206ENST00000597261 KIF27Q86VH2 1401 aa28.02■■■□□ 2.08
CHERP-206ENST00000597261 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
CHERP-206ENST00000597261 GRIN2AQ12879 1464 aa27.94■■■□□ 2.06
CHERP-206ENST00000597261 ADAMTS12P58397 1594 aa27.92■■■□□ 2.06
CHERP-206ENST00000597261 CLASP1Q7Z460 1538 aa27.9■■■□□ 2.06
CHERP-206ENST00000597261 ARHGEF11O15085 1522 aa27.88■■■□□ 2.05
CHERP-206ENST00000597261 NUP160Q12769 1436 aa27.87■■■□□ 2.05
CHERP-206ENST00000597261 RIMBP3CA6NJZ7 1639 aa27.84■■■□□ 2.05
CHERP-206ENST00000597261 RIMBP3BA6NNM3 1639 aa27.84■■■□□ 2.05
CHERP-206ENST00000597261 RIMBP3Q9UFD9 1639 aa27.84■■■□□ 2.05
CHERP-206ENST00000597261 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
CHERP-206ENST00000597261 CYB5RLQ6IPT4 315 aa27.79■■■□□ 2.04
CHERP-206ENST00000597261 RUSC2Q8N2Y8 1516 aa27.77■■■□□ 2.04
CHERP-206ENST00000597261 CEP170Q5SW79 1584 aa27.75■■■□□ 2.03
CHERP-206ENST00000597261 JPH4Q96JJ6 628 aa27.71■■■□□ 2.03
CHERP-206ENST00000597261 CUL7Q14999 1698 aa27.68■■■□□ 2.02
CHERP-206ENST00000597261 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
CHERP-206ENST00000597261 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms