RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
SH2D3A-206ENST00000597254 CCDC180Q9P1Z9 1646 aa23.82■■□□□ 1.4
SH2D3A-206ENST00000597254 ABCC9O60706 1549 aa23.72■■□□□ 1.39
SH2D3A-206ENST00000597254 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
SH2D3A-206ENST00000597254 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
SH2D3A-206ENST00000597254 NACADO15069 1562 aa22.5■■□□□ 1.19
SH2D3A-206ENST00000597254 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
SH2D3A-206ENST00000597254 MYO15BQ96JP2 1530 aa22.22■■□□□ 1.15
SH2D3A-206ENST00000597254 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
SH2D3A-206ENST00000597254 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
SH2D3A-206ENST00000597254 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
SH2D3A-206ENST00000597254 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
SH2D3A-206ENST00000597254 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
SH2D3A-206ENST00000597254 SCRIBQ14160 1630 aa21.73■■□□□ 1.07
SH2D3A-206ENST00000597254 SHROOM4Q9ULL8 1493 aa21.68■■□□□ 1.06
SH2D3A-206ENST00000597254 CC2D2AQ9P2K1 1620 aa21.41■■□□□ 1.02
SH2D3A-206ENST00000597254 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
SH2D3A-206ENST00000597254 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
SH2D3A-206ENST00000597254 NCAPD3P42695 1498 aa20.77■□□□□ 0.92
SH2D3A-206ENST00000597254 SMARCA4P51532 1647 aa20.73■□□□□ 0.91
SH2D3A-206ENST00000597254 ATAD2BQ9ULI0 1458 aa20.73■□□□□ 0.91
SH2D3A-206ENST00000597254 SMARCA2P51531 1590 aa20.7■□□□□ 0.9
SH2D3A-206ENST00000597254 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
SH2D3A-206ENST00000597254 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
SH2D3A-206ENST00000597254 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
SH2D3A-206ENST00000597254 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
SH2D3A-206ENST00000597254 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
SH2D3A-206ENST00000597254 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
SH2D3A-206ENST00000597254 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
SH2D3A-206ENST00000597254 PEG3Q9GZU2 1588 aa20.51■□□□□ 0.87
SH2D3A-206ENST00000597254 NESP48681 1621 aa20.39■□□□□ 0.86
SH2D3A-206ENST00000597254 CUX2O14529 1486 aa20.38■□□□□ 0.85
SH2D3A-206ENST00000597254 WIZO95785 1651 aa20.35■□□□□ 0.85
SH2D3A-206ENST00000597254 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
SH2D3A-206ENST00000597254 DNAJC5Q9H3Z4 198 aa20.24■□□□□ 0.83
SH2D3A-206ENST00000597254 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
SH2D3A-206ENST00000597254 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
SH2D3A-206ENST00000597254 THOC2Q8NI27 1593 aaKnown RBP20.13■□□□□ 0.81
SH2D3A-206ENST00000597254 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
SH2D3A-206ENST00000597254 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
SH2D3A-206ENST00000597254 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
SH2D3A-206ENST00000597254 CFTRP13569 1480 aa19.95■□□□□ 0.78
SH2D3A-206ENST00000597254 CEP164Q9UPV0 1460 aa19.95■□□□□ 0.78
SH2D3A-206ENST00000597254 CCDC88BA6NC98 1476 aa19.94■□□□□ 0.78
SH2D3A-206ENST00000597254 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
SH2D3A-206ENST00000597254 WDR62O43379 1518 aa19.91■□□□□ 0.78
SH2D3A-206ENST00000597254 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
SH2D3A-206ENST00000597254 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
SH2D3A-206ENST00000597254 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
SH2D3A-206ENST00000597254 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
SH2D3A-206ENST00000597254 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
SH2D3A-206ENST00000597254 OSCARQ8IYS5 282 aa19.53■□□□□ 0.72
SH2D3A-206ENST00000597254 DNMBPQ6XZF7 1577 aa19.5■□□□□ 0.71
SH2D3A-206ENST00000597254 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
SH2D3A-206ENST00000597254 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
SH2D3A-206ENST00000597254 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
SH2D3A-206ENST00000597254 EIF4G3O43432 1585 aaKnown RBP19.36■□□□□ 0.69
SH2D3A-206ENST00000597254 POLA1P09884 1462 aaPredicted RBP19.36■□□□□ 0.69
SH2D3A-206ENST00000597254 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
SH2D3A-206ENST00000597254 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.69
SH2D3A-206ENST00000597254 SOGA1O94964 1423 aa19.32■□□□□ 0.68
SH2D3A-206ENST00000597254 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
SH2D3A-206ENST00000597254 RAD54L2Q9Y4B4 1467 aa19.3■□□□□ 0.68
SH2D3A-206ENST00000597254 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
SH2D3A-206ENST00000597254 CUX1P39880 1505 aa19.26■□□□□ 0.67
SH2D3A-206ENST00000597254 TDRD9Q8NDG6 1382 aaKnown RBP19.26■□□□□ 0.67
SH2D3A-206ENST00000597254 FBLN2P98095 1184 aa19.25■□□□□ 0.67
SH2D3A-206ENST00000597254 SYNJ1O43426 1573 aa19.22■□□□□ 0.67
SH2D3A-206ENST00000597254 CHD1O14646 1710 aa19.2■□□□□ 0.66
SH2D3A-206ENST00000597254 RIMBP3CA6NJZ7 1639 aa19.19■□□□□ 0.66
SH2D3A-206ENST00000597254 RIMBP3BA6NNM3 1639 aa19.19■□□□□ 0.66
SH2D3A-206ENST00000597254 RIMBP3Q9UFD9 1639 aa19.19■□□□□ 0.66
SH2D3A-206ENST00000597254 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
SH2D3A-206ENST00000597254 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
SH2D3A-206ENST00000597254 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
SH2D3A-206ENST00000597254 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
SH2D3A-206ENST00000597254 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
SH2D3A-206ENST00000597254 GRIN2BQ13224 1484 aa19.13■□□□□ 0.65
SH2D3A-206ENST00000597254 CHMP7Q8WUX9 453 aaPredicted RBP19.12■□□□□ 0.65
SH2D3A-206ENST00000597254 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
SH2D3A-206ENST00000597254 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.64
SH2D3A-206ENST00000597254 ABCA10Q8WWZ4 1543 aa19.06■□□□□ 0.64
SH2D3A-206ENST00000597254 CYB5RLQ6IPT4 315 aa19.06■□□□□ 0.64
SH2D3A-206ENST00000597254 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
SH2D3A-206ENST00000597254 PBRM1Q86U86 1689 aa19.01■□□□□ 0.63
SH2D3A-206ENST00000597254 ABCA5Q8WWZ7 1642 aa18.99■□□□□ 0.63
SH2D3A-206ENST00000597254 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
SH2D3A-206ENST00000597254 CLASP1Q7Z460 1538 aa18.97■□□□□ 0.63
SH2D3A-206ENST00000597254 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
SH2D3A-206ENST00000597254 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
SH2D3A-206ENST00000597254 EEA1Q15075 1411 aa18.88■□□□□ 0.61
SH2D3A-206ENST00000597254 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
SH2D3A-206ENST00000597254 GRIN2AQ12879 1464 aa18.86■□□□□ 0.61
SH2D3A-206ENST00000597254 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
SH2D3A-206ENST00000597254 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
SH2D3A-206ENST00000597254 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
SH2D3A-206ENST00000597254 TRHP20396 242 aaPredicted RBP18.84■□□□□ 0.61
SH2D3A-206ENST00000597254 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
SH2D3A-206ENST00000597254 NUP160Q12769 1436 aa18.78■□□□□ 0.6
SH2D3A-206ENST00000597254 CEP170Q5SW79 1584 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms