RNA–Protein interactions for RNA: ENST00000597168.1

SH2D3A-205, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-205ENST00000597168 NISCHQ9Y2I1 1504 aa26.61■■□□□ 1.85
SH2D3A-205ENST00000597168 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.33
SH2D3A-205ENST00000597168 ABCC9O60706 1549 aa22.36■■□□□ 1.17
SH2D3A-205ENST00000597168 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
SH2D3A-205ENST00000597168 DCAF8L2P0C7V8 631 aa22.12■■□□□ 1.13
SH2D3A-205ENST00000597168 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
SH2D3A-205ENST00000597168 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
SH2D3A-205ENST00000597168 NACADO15069 1562 aa21.84■■□□□ 1.09
SH2D3A-205ENST00000597168 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
SH2D3A-205ENST00000597168 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.03
SH2D3A-205ENST00000597168 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
SH2D3A-205ENST00000597168 UNC13AQ9UPW8 1703 aa21.24■□□□□ 0.99
SH2D3A-205ENST00000597168 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
SH2D3A-205ENST00000597168 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
SH2D3A-205ENST00000597168 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
SH2D3A-205ENST00000597168 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.9
SH2D3A-205ENST00000597168 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
SH2D3A-205ENST00000597168 MROH2BQ7Z745 1585 aa20.54■□□□□ 0.88
SH2D3A-205ENST00000597168 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
SH2D3A-205ENST00000597168 SUPT5HO00267 1087 aaKnown RBP20.51■□□□□ 0.87
SH2D3A-205ENST00000597168 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
SH2D3A-205ENST00000597168 EIF4G1Q04637 1599 aaKnown RBP20.45■□□□□ 0.86
SH2D3A-205ENST00000597168 WIZO95785 1651 aa20.35■□□□□ 0.85
SH2D3A-205ENST00000597168 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
SH2D3A-205ENST00000597168 PEG3Q9GZU2 1588 aa20.27■□□□□ 0.84
SH2D3A-205ENST00000597168 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
SH2D3A-205ENST00000597168 CC2D2AQ9P2K1 1620 aa20.23■□□□□ 0.83
SH2D3A-205ENST00000597168 NCAPD3P42695 1498 aa20.18■□□□□ 0.82
SH2D3A-205ENST00000597168 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
SH2D3A-205ENST00000597168 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
SH2D3A-205ENST00000597168 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
SH2D3A-205ENST00000597168 CCDC88BA6NC98 1476 aa19.94■□□□□ 0.78
SH2D3A-205ENST00000597168 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
SH2D3A-205ENST00000597168 CFTRP13569 1480 aa19.61■□□□□ 0.73
SH2D3A-205ENST00000597168 NESP48681 1621 aa19.53■□□□□ 0.72
SH2D3A-205ENST00000597168 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
SH2D3A-205ENST00000597168 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
SH2D3A-205ENST00000597168 PRDM2Q13029 1718 aa19.46■□□□□ 0.71
SH2D3A-205ENST00000597168 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
SH2D3A-205ENST00000597168 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
SH2D3A-205ENST00000597168 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
SH2D3A-205ENST00000597168 DNAJC5Q9H3Z4 198 aa19.35■□□□□ 0.69
SH2D3A-205ENST00000597168 TRIM41Q8WV44 630 aa19.34■□□□□ 0.69
SH2D3A-205ENST00000597168 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
SH2D3A-205ENST00000597168 CEP164Q9UPV0 1460 aa19.29■□□□□ 0.68
SH2D3A-205ENST00000597168 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
SH2D3A-205ENST00000597168 CUX1P39880 1505 aa19.22■□□□□ 0.67
SH2D3A-205ENST00000597168 SYNJ1O43426 1573 aa19.22■□□□□ 0.67
SH2D3A-205ENST00000597168 ERCC6Q03468 1493 aa19.2■□□□□ 0.66
SH2D3A-205ENST00000597168 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
SH2D3A-205ENST00000597168 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
SH2D3A-205ENST00000597168 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
SH2D3A-205ENST00000597168 TOPBP1Q92547 1522 aa19.15■□□□□ 0.66
SH2D3A-205ENST00000597168 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
SH2D3A-205ENST00000597168 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.65
SH2D3A-205ENST00000597168 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
SH2D3A-205ENST00000597168 THOC2Q8NI27 1593 aaKnown RBP19.04■□□□□ 0.64
SH2D3A-205ENST00000597168 WDR62O43379 1518 aa19.04■□□□□ 0.64
SH2D3A-205ENST00000597168 POLA1P09884 1462 aaPredicted RBP19.01■□□□□ 0.63
SH2D3A-205ENST00000597168 SOGA1O94964 1423 aa18.99■□□□□ 0.63
SH2D3A-205ENST00000597168 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
SH2D3A-205ENST00000597168 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
SH2D3A-205ENST00000597168 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
SH2D3A-205ENST00000597168 CUX2O14529 1486 aa18.91■□□□□ 0.62
SH2D3A-205ENST00000597168 ABCA10Q8WWZ4 1543 aa18.89■□□□□ 0.61
SH2D3A-205ENST00000597168 EEA1Q15075 1411 aa18.88■□□□□ 0.61
SH2D3A-205ENST00000597168 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
SH2D3A-205ENST00000597168 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
SH2D3A-205ENST00000597168 IFT140Q96RY7 1462 aa18.86■□□□□ 0.61
SH2D3A-205ENST00000597168 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
SH2D3A-205ENST00000597168 WDR97A6NE52 1622 aa18.83■□□□□ 0.61
SH2D3A-205ENST00000597168 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
SH2D3A-205ENST00000597168 IGF1RP08069 1367 aa18.76■□□□□ 0.59
SH2D3A-205ENST00000597168 GAPVD1Q14C86 1478 aa18.76■□□□□ 0.59
SH2D3A-205ENST00000597168 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
SH2D3A-205ENST00000597168 AQRO60306 1485 aaKnown RBP eCLIP18.75■□□□□ 0.592e-6■■■■■ 26.9
SH2D3A-205ENST00000597168 ABCA5Q8WWZ7 1642 aa18.74■□□□□ 0.59
SH2D3A-205ENST00000597168 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
SH2D3A-205ENST00000597168 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
SH2D3A-205ENST00000597168 ERICH3Q5RHP9 1530 aa18.66■□□□□ 0.58
SH2D3A-205ENST00000597168 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
SH2D3A-205ENST00000597168 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
SH2D3A-205ENST00000597168 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
SH2D3A-205ENST00000597168 EIF4G3O43432 1585 aaKnown RBP18.65■□□□□ 0.58
SH2D3A-205ENST00000597168 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
SH2D3A-205ENST00000597168 KIF21BO75037 1637 aa18.62■□□□□ 0.57
SH2D3A-205ENST00000597168 CUL7Q14999 1698 aa18.59■□□□□ 0.57
SH2D3A-205ENST00000597168 GOLGA3Q08378 1498 aa18.58■□□□□ 0.57
SH2D3A-205ENST00000597168 RAPGEF2Q9Y4G8 1499 aa18.58■□□□□ 0.57
SH2D3A-205ENST00000597168 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
SH2D3A-205ENST00000597168 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
SH2D3A-205ENST00000597168 FHAD1B1AJZ9 1412 aa18.55■□□□□ 0.56
SH2D3A-205ENST00000597168 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.56
SH2D3A-205ENST00000597168 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
SH2D3A-205ENST00000597168 TNIKQ9UKE5 1360 aa18.5■□□□□ 0.55
SH2D3A-205ENST00000597168 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
SH2D3A-205ENST00000597168 SYNJ2O15056 1496 aa18.46■□□□□ 0.54
SH2D3A-205ENST00000597168 FBLN2P98095 1184 aa18.44■□□□□ 0.54
SH2D3A-205ENST00000597168 GRIN2AQ12879 1464 aa18.41■□□□□ 0.54
SH2D3A-205ENST00000597168 CHD1O14646 1710 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms