RNA–Protein interactions for RNA: ENST00000597026.5

COPE-206, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2

Gene COPE, Length 678 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-206ENST00000597026 NISCHQ9Y2I1 1504 aa40.36■■■■■ 4.05
COPE-206ENST00000597026 CCDC180Q9P1Z9 1646 aa36.18■■■■□ 3.38
COPE-206ENST00000597026 ABCC9O60706 1549 aa35.6■■■■□ 3.29
COPE-206ENST00000597026 RB1CC1Q8TDY2 1594 aa34.11■■■■□ 3.05
COPE-206ENST00000597026 NACADO15069 1562 aa33.96■■■■□ 3.03
COPE-206ENST00000597026 MYO15BQ96JP2 1530 aa33.65■■■□□ 2.98
COPE-206ENST00000597026 UNC13AQ9UPW8 1703 aa33.6■■■□□ 2.97
COPE-206ENST00000597026 ZCCHC6Q5VYS8 1495 aaKnown RBP33.6■■■□□ 2.97
COPE-206ENST00000597026 DCAF8L2P0C7V8 631 aa33.51■■■□□ 2.95
COPE-206ENST00000597026 DCAF1Q9Y4B6 1507 aa33.38■■■□□ 2.93
COPE-206ENST00000597026 BICRAQ9NZM4 1560 aa33.23■■■□□ 2.91
COPE-206ENST00000597026 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
COPE-206ENST00000597026 DNAJC5BQ9UF47 199 aa32.99■■■□□ 2.87
COPE-206ENST00000597026 SCRIBQ14160 1630 aa32.93■■■□□ 2.86
COPE-206ENST00000597026 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
COPE-206ENST00000597026 EIF4G1Q04637 1599 aaKnown RBP32.31■■■□□ 2.76
COPE-206ENST00000597026 CC2D2AQ9P2K1 1620 aa32.28■■■□□ 2.76
COPE-206ENST00000597026 CECR2Q9BXF3 1484 aa32.01■■■□□ 2.71
COPE-206ENST00000597026 SMARCA4P51532 1647 aa31.48■■■□□ 2.63
COPE-206ENST00000597026 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
COPE-206ENST00000597026 ATAD2BQ9ULI0 1458 aa31.3■■■□□ 2.6
COPE-206ENST00000597026 BAZ1AQ9NRL2 1556 aaPredicted RBP31.29■■■□□ 2.6
COPE-206ENST00000597026 SMARCA2P51531 1590 aa31.24■■■□□ 2.59
COPE-206ENST00000597026 HMGXB3Q12766 1538 aa31.23■■■□□ 2.59
COPE-206ENST00000597026 PEG3Q9GZU2 1588 aa31.17■■■□□ 2.58
COPE-206ENST00000597026 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
COPE-206ENST00000597026 BAZ1BQ9UIG0 1483 aaKnown RBP31■■■□□ 2.55
COPE-206ENST00000597026 WIZO95785 1651 aa30.83■■■□□ 2.53
COPE-206ENST00000597026 NESP48681 1621 aa30.76■■■□□ 2.51
COPE-206ENST00000597026 ERCC6Q03468 1493 aa30.63■■■□□ 2.49
COPE-206ENST00000597026 LAMC3Q9Y6N6 1575 aa30.61■■■□□ 2.49
COPE-206ENST00000597026 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
COPE-206ENST00000597026 CUX2O14529 1486 aa30.52■■■□□ 2.48
COPE-206ENST00000597026 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
COPE-206ENST00000597026 THOC2Q8NI27 1593 aaKnown RBP30.5■■■□□ 2.47
COPE-206ENST00000597026 TOP2AP11388 1531 aaKnown RBP30.43■■■□□ 2.46
COPE-206ENST00000597026 CADPSQ9ULU8 1353 aa30.3■■■□□ 2.44
COPE-206ENST00000597026 PDS5BQ9NTI5 1447 aa30.26■■■□□ 2.43
COPE-206ENST00000597026 CFTRP13569 1480 aa30.13■■■□□ 2.41
COPE-206ENST00000597026 PRDM2Q13029 1718 aa30.13■■■□□ 2.41
COPE-206ENST00000597026 WDR62O43379 1518 aa30.09■■■□□ 2.41
COPE-206ENST00000597026 MRC2Q9UBG0 1479 aa30.09■■■□□ 2.41
COPE-206ENST00000597026 FANCD2Q9BXW9 1451 aa30.04■■■□□ 2.4
COPE-206ENST00000597026 CEP164Q9UPV0 1460 aa30.04■■■□□ 2.4
COPE-206ENST00000597026 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
COPE-206ENST00000597026 DNAJC5Q9H3Z4 198 aa29.89■■■□□ 2.38
COPE-206ENST00000597026 URB2Q14146 1524 aaKnown RBP29.85■■■□□ 2.37
COPE-206ENST00000597026 TOPBP1Q92547 1522 aa29.55■■■□□ 2.32
COPE-206ENST00000597026 DNMBPQ6XZF7 1577 aa29.52■■■□□ 2.32
COPE-206ENST00000597026 IFT140Q96RY7 1462 aa29.4■■■□□ 2.3
COPE-206ENST00000597026 ABCC8Q09428 1581 aa29.39■■■□□ 2.3
COPE-206ENST00000597026 ZNF608Q9ULD9 1512 aaPredicted RBP29.39■■■□□ 2.3
COPE-206ENST00000597026 TARBP1Q13395 1621 aaKnown RBP29.37■■■□□ 2.29
COPE-206ENST00000597026 EIF4G3O43432 1585 aaKnown RBP29.35■■■□□ 2.29
COPE-206ENST00000597026 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
COPE-206ENST00000597026 SUPT5HO00267 1087 aaKnown RBP29.27■■■□□ 2.28
COPE-206ENST00000597026 CUX1P39880 1505 aa29.25■■■□□ 2.27
COPE-206ENST00000597026 FGD5Q6ZNL6 1462 aa29.15■■■□□ 2.26
COPE-206ENST00000597026 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
COPE-206ENST00000597026 RAD54L2Q9Y4B4 1467 aa29.13■■■□□ 2.25
COPE-206ENST00000597026 CHD1O14646 1710 aa29.09■■■□□ 2.25
COPE-206ENST00000597026 AQRO60306 1485 aaKnown RBP eCLIP29.09■■■□□ 2.251e-7■■■□□ 17
COPE-206ENST00000597026 SOGA1O94964 1423 aa29.02■■■□□ 2.24
COPE-206ENST00000597026 OSCARQ8IYS5 282 aa28.96■■■□□ 2.23
COPE-206ENST00000597026 BIVM-ERCC5R4GMW8 1640 aa28.95■■■□□ 2.23
COPE-206ENST00000597026 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
COPE-206ENST00000597026 TDRD9Q8NDG6 1382 aaKnown RBP28.91■■■□□ 2.22
COPE-206ENST00000597026 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
COPE-206ENST00000597026 ABCA5Q8WWZ7 1642 aa28.9■■■□□ 2.22
COPE-206ENST00000597026 TOP2BQ02880 1626 aa28.89■■■□□ 2.22
COPE-206ENST00000597026 RIMBP3CA6NJZ7 1639 aa28.88■■■□□ 2.21
COPE-206ENST00000597026 RIMBP3BA6NNM3 1639 aa28.88■■■□□ 2.21
COPE-206ENST00000597026 RIMBP3Q9UFD9 1639 aa28.88■■■□□ 2.21
COPE-206ENST00000597026 SNAPC4Q5SXM2 1469 aa28.87■■■□□ 2.21
COPE-206ENST00000597026 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
COPE-206ENST00000597026 GRIN2BQ13224 1484 aa28.78■■■□□ 2.2
COPE-206ENST00000597026 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
COPE-206ENST00000597026 ARHGEF11O15085 1522 aa28.78■■■□□ 2.2
COPE-206ENST00000597026 WRNQ14191 1432 aaPredicted RBP eCLIP28.77■■■□□ 2.2
COPE-206ENST00000597026 GAPVD1Q14C86 1478 aa28.74■■■□□ 2.19
COPE-206ENST00000597026 CLASP1Q7Z460 1538 aa28.71■■■□□ 2.19
COPE-206ENST00000597026 TRIM41Q8WV44 630 aa28.71■■■□□ 2.19
COPE-206ENST00000597026 SYNJ2O15056 1496 aa28.67■■■□□ 2.18
COPE-206ENST00000597026 ADAMTS12P58397 1594 aa28.62■■■□□ 2.17
COPE-206ENST00000597026 FBLN2P98095 1184 aa28.61■■■□□ 2.17
COPE-206ENST00000597026 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
COPE-206ENST00000597026 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
COPE-206ENST00000597026 CHMP7Q8WUX9 453 aaPredicted RBP28.48■■■□□ 2.15
COPE-206ENST00000597026 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
COPE-206ENST00000597026 CEP170Q5SW79 1584 aa28.45■■■□□ 2.14
COPE-206ENST00000597026 FHAD1B1AJZ9 1412 aa28.37■■■□□ 2.13
COPE-206ENST00000597026 NUP160Q12769 1436 aa28.36■■■□□ 2.13
COPE-206ENST00000597026 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
COPE-206ENST00000597026 ERCC6L2Q5T890 1561 aa28.3■■■□□ 2.12
COPE-206ENST00000597026 CYB5RLQ6IPT4 315 aa28.28■■■□□ 2.12
COPE-206ENST00000597026 RUSC2Q8N2Y8 1516 aa28.24■■■□□ 2.11
COPE-206ENST00000597026 CUL7Q14999 1698 aa28.22■■■□□ 2.11
COPE-206ENST00000597026 KIF27Q86VH2 1401 aa28.15■■■□□ 2.1
COPE-206ENST00000597026 IGF1RP08069 1367 aa28.1■■■□□ 2.09
COPE-206ENST00000597026 PRG4Q92954 1404 aaPredicted RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms