RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 NISCHQ9Y2I1 1504 aa38.38■■■■□ 3.74
PPFIA4-208ENST00000597023 CCDC180Q9P1Z9 1646 aa34.16■■■■□ 3.06
PPFIA4-208ENST00000597023 ABCC9O60706 1549 aa34.11■■■■□ 3.05
PPFIA4-208ENST00000597023 DCAF8L2P0C7V8 631 aa32.52■■■□□ 2.8
PPFIA4-208ENST00000597023 RB1CC1Q8TDY2 1594 aa32.46■■■□□ 2.79
PPFIA4-208ENST00000597023 NACADO15069 1562 aa32.3■■■□□ 2.76
PPFIA4-208ENST00000597023 PABPN1Q86U42 306 aaKnown RBP eCLIP31.91■■■□□ 2.7
PPFIA4-208ENST00000597023 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
PPFIA4-208ENST00000597023 ZCCHC6Q5VYS8 1495 aaKnown RBP31.86■■■□□ 2.69
PPFIA4-208ENST00000597023 DNAJC5BQ9UF47 199 aa31.8■■■□□ 2.68
PPFIA4-208ENST00000597023 UNC13AQ9UPW8 1703 aa31.68■■■□□ 2.66
PPFIA4-208ENST00000597023 DCAF1Q9Y4B6 1507 aa31.63■■■□□ 2.65
PPFIA4-208ENST00000597023 BICRAQ9NZM4 1560 aa31.54■■■□□ 2.64
PPFIA4-208ENST00000597023 SCRIBQ14160 1630 aa31.33■■■□□ 2.61
PPFIA4-208ENST00000597023 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.55
PPFIA4-208ENST00000597023 CC2D2AQ9P2K1 1620 aa30.74■■■□□ 2.51
PPFIA4-208ENST00000597023 EIF4G1Q04637 1599 aaKnown RBP30.74■■■□□ 2.51
PPFIA4-208ENST00000597023 CECR2Q9BXF3 1484 aa30.64■■■□□ 2.5
PPFIA4-208ENST00000597023 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
PPFIA4-208ENST00000597023 ATAD2BQ9ULI0 1458 aa29.86■■■□□ 2.37
PPFIA4-208ENST00000597023 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
PPFIA4-208ENST00000597023 BAZ1AQ9NRL2 1556 aaPredicted RBP29.74■■■□□ 2.35
PPFIA4-208ENST00000597023 SMARCA2P51531 1590 aa29.71■■■□□ 2.35
PPFIA4-208ENST00000597023 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.33
PPFIA4-208ENST00000597023 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
PPFIA4-208ENST00000597023 BAZ1BQ9UIG0 1483 aaKnown RBP29.58■■■□□ 2.33
PPFIA4-208ENST00000597023 PEG3Q9GZU2 1588 aa29.5■■■□□ 2.31
PPFIA4-208ENST00000597023 NESP48681 1621 aa29.4■■■□□ 2.3
PPFIA4-208ENST00000597023 ERCC6Q03468 1493 aa29.39■■■□□ 2.3
PPFIA4-208ENST00000597023 WIZO95785 1651 aa29.28■■■□□ 2.28
PPFIA4-208ENST00000597023 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
PPFIA4-208ENST00000597023 CUX2O14529 1486 aa29.14■■■□□ 2.26
PPFIA4-208ENST00000597023 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
PPFIA4-208ENST00000597023 CADPSQ9ULU8 1353 aa29.02■■■□□ 2.24
PPFIA4-208ENST00000597023 PDS5BQ9NTI5 1447 aa28.98■■■□□ 2.23
PPFIA4-208ENST00000597023 KIF21AQ7Z4S6 1674 aa28.9■■■□□ 2.22
PPFIA4-208ENST00000597023 THOC2Q8NI27 1593 aaKnown RBP28.9■■■□□ 2.22
PPFIA4-208ENST00000597023 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
PPFIA4-208ENST00000597023 TOP2AP11388 1531 aaKnown RBP28.88■■■□□ 2.21
PPFIA4-208ENST00000597023 CFTRP13569 1480 aa28.72■■■□□ 2.19
PPFIA4-208ENST00000597023 MRC2Q9UBG0 1479 aa28.72■■■□□ 2.19
PPFIA4-208ENST00000597023 FANCD2Q9BXW9 1451 aa28.69■■■□□ 2.18
PPFIA4-208ENST00000597023 CEP164Q9UPV0 1460 aa28.66■■■□□ 2.18
PPFIA4-208ENST00000597023 CCDC88BA6NC98 1476 aa28.63■■■□□ 2.17
PPFIA4-208ENST00000597023 WDR62O43379 1518 aa28.59■■■□□ 2.17
PPFIA4-208ENST00000597023 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
PPFIA4-208ENST00000597023 PRDM2Q13029 1718 aa28.29■■■□□ 2.12
PPFIA4-208ENST00000597023 SUPT5HO00267 1087 aaKnown RBP28.26■■■□□ 2.11
PPFIA4-208ENST00000597023 TOPBP1Q92547 1522 aa28.17■■■□□ 2.1
PPFIA4-208ENST00000597023 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.08
PPFIA4-208ENST00000597023 IFT140Q96RY7 1462 aa28.07■■■□□ 2.08
PPFIA4-208ENST00000597023 ABCC8Q09428 1581 aa28.06■■■□□ 2.08
PPFIA4-208ENST00000597023 DNMBPQ6XZF7 1577 aa28.04■■■□□ 2.08
PPFIA4-208ENST00000597023 OSCARQ8IYS5 282 aa27.99■■■□□ 2.07
PPFIA4-208ENST00000597023 POLA1P09884 1462 aaPredicted RBP27.9■■■□□ 2.06
PPFIA4-208ENST00000597023 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.054e-7■■■■■ 46.1
PPFIA4-208ENST00000597023 RAD54L2Q9Y4B4 1467 aa27.88■■■□□ 2.05
PPFIA4-208ENST00000597023 TRIM41Q8WV44 630 aa27.87■■■□□ 2.05
PPFIA4-208ENST00000597023 TARBP1Q13395 1621 aaKnown RBP27.84■■■□□ 2.05
PPFIA4-208ENST00000597023 EIF4G3O43432 1585 aaKnown RBP27.83■■■□□ 2.05
PPFIA4-208ENST00000597023 SOGA1O94964 1423 aa27.83■■■□□ 2.05
PPFIA4-208ENST00000597023 CUX1P39880 1505 aa27.82■■■□□ 2.04
PPFIA4-208ENST00000597023 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
PPFIA4-208ENST00000597023 TDRD9Q8NDG6 1382 aaKnown RBP27.78■■■□□ 2.04
PPFIA4-208ENST00000597023 FBLN2P98095 1184 aa27.71■■■□□ 2.03
PPFIA4-208ENST00000597023 SNAPC4Q5SXM2 1469 aa27.56■■■□□ 2
PPFIA4-208ENST00000597023 CHD1O14646 1710 aa27.55■■■□□ 2
PPFIA4-208ENST00000597023 RIMBP3CA6NJZ7 1639 aa27.5■■□□□ 1.99
PPFIA4-208ENST00000597023 RIMBP3BA6NNM3 1639 aa27.5■■□□□ 1.99
PPFIA4-208ENST00000597023 RIMBP3Q9UFD9 1639 aa27.5■■□□□ 1.99
PPFIA4-208ENST00000597023 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
PPFIA4-208ENST00000597023 GRIN2BQ13224 1484 aa27.5■■□□□ 1.99
PPFIA4-208ENST00000597023 WRNQ14191 1432 aaPredicted RBP eCLIP27.48■■□□□ 1.99
PPFIA4-208ENST00000597023 WDR97A6NE52 1622 aa27.48■■□□□ 1.99
PPFIA4-208ENST00000597023 ARHGEF11O15085 1522 aa27.46■■□□□ 1.99
PPFIA4-208ENST00000597023 GAPVD1Q14C86 1478 aa27.46■■□□□ 1.99
PPFIA4-208ENST00000597023 ABCA10Q8WWZ4 1543 aa27.45■■□□□ 1.98
PPFIA4-208ENST00000597023 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
PPFIA4-208ENST00000597023 SYNJ1O43426 1573 aa27.42■■□□□ 1.98
PPFIA4-208ENST00000597023 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
PPFIA4-208ENST00000597023 CYB5RLQ6IPT4 315 aa27.38■■□□□ 1.97
PPFIA4-208ENST00000597023 SYNJ2O15056 1496 aa27.36■■□□□ 1.97
PPFIA4-208ENST00000597023 BIVM-ERCC5R4GMW8 1640 aa27.35■■□□□ 1.97
PPFIA4-208ENST00000597023 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
PPFIA4-208ENST00000597023 PBRM1Q86U86 1689 aa27.33■■□□□ 1.97
PPFIA4-208ENST00000597023 CLASP1Q7Z460 1538 aa27.26■■□□□ 1.95
PPFIA4-208ENST00000597023 ARAP1Q96P48 1450 aa27.24■■□□□ 1.95
PPFIA4-208ENST00000597023 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
PPFIA4-208ENST00000597023 ADAMTS12P58397 1594 aa27.13■■□□□ 1.93
PPFIA4-208ENST00000597023 FHAD1B1AJZ9 1412 aa27.11■■□□□ 1.93
PPFIA4-208ENST00000597023 ERICH3Q5RHP9 1530 aa27.08■■□□□ 1.93
PPFIA4-208ENST00000597023 NUP160Q12769 1436 aa27.03■■□□□ 1.92
PPFIA4-208ENST00000597023 CEP170Q5SW79 1584 aa27.03■■□□□ 1.92
PPFIA4-208ENST00000597023 TRHP20396 242 aaPredicted RBP26.99■■□□□ 1.91
PPFIA4-208ENST00000597023 ERCC6L2Q5T890 1561 aa26.95■■□□□ 1.9
PPFIA4-208ENST00000597023 IGF1RP08069 1367 aa26.93■■□□□ 1.9
PPFIA4-208ENST00000597023 KIF27Q86VH2 1401 aa26.92■■□□□ 1.9
PPFIA4-208ENST00000597023 JPH4Q96JJ6 628 aa26.85■■□□□ 1.89
PPFIA4-208ENST00000597023 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
PPFIA4-208ENST00000597023 SHROOM2Q13796 1616 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms