RNA–Protein interactions for RNA: ENST00000596983.1

MCM3-206, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 3

Gene MCM3, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-206ENST00000596983 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
MCM3-206ENST00000596983 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
MCM3-206ENST00000596983 ABCC9O60706 1549 aa32.66■■■□□ 2.82
MCM3-206ENST00000596983 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
MCM3-206ENST00000596983 NACADO15069 1562 aa30.9■■■□□ 2.54
MCM3-206ENST00000596983 DCAF8L2P0C7V8 631 aa30.67■■■□□ 2.5
MCM3-206ENST00000596983 DNAJC5BQ9UF47 199 aa30.58■■■□□ 2.49
MCM3-206ENST00000596983 MYO15BQ96JP2 1530 aa30.5■■■□□ 2.47
MCM3-206ENST00000596983 PABPN1Q86U42 306 aaKnown RBP eCLIP30.38■■■□□ 2.45
MCM3-206ENST00000596983 UNC13AQ9UPW8 1703 aa30.37■■■□□ 2.45
MCM3-206ENST00000596983 ZCCHC6Q5VYS8 1495 aaKnown RBP30.24■■■□□ 2.43
MCM3-206ENST00000596983 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.43
MCM3-206ENST00000596983 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
MCM3-206ENST00000596983 SHROOM4Q9ULL8 1493 aa29.82■■■□□ 2.36
MCM3-206ENST00000596983 SCRIBQ14160 1630 aa29.79■■■□□ 2.36
MCM3-206ENST00000596983 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
MCM3-206ENST00000596983 EIF4G1Q04637 1599 aaKnown RBP29.46■■■□□ 2.31
MCM3-206ENST00000596983 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
MCM3-206ENST00000596983 NCAPD3P42695 1498 aa28.52■■■□□ 2.16
MCM3-206ENST00000596983 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.14
MCM3-206ENST00000596983 SMARCA4P51532 1647 aa28.43■■■□□ 2.14
MCM3-206ENST00000596983 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
MCM3-206ENST00000596983 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
MCM3-206ENST00000596983 BAZ1AQ9NRL2 1556 aaPredicted RBP28.29■■■□□ 2.12
MCM3-206ENST00000596983 ERCC6Q03468 1493 aa28.2■■■□□ 2.1
MCM3-206ENST00000596983 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
MCM3-206ENST00000596983 PEG3Q9GZU2 1588 aa28.16■■■□□ 2.1
MCM3-206ENST00000596983 CUX2O14529 1486 aa28.15■■■□□ 2.1
MCM3-206ENST00000596983 MROH2BQ7Z745 1585 aa28.08■■■□□ 2.09
MCM3-206ENST00000596983 NESP48681 1621 aa28.07■■■□□ 2.08
MCM3-206ENST00000596983 DNAJC5Q9H3Z4 198 aa28.05■■■□□ 2.08
MCM3-206ENST00000596983 LAMC3Q9Y6N6 1575 aa27.88■■■□□ 2.05
MCM3-206ENST00000596983 THOC2Q8NI27 1593 aaKnown RBP27.8■■■□□ 2.04
MCM3-206ENST00000596983 WIZO95785 1651 aa27.73■■■□□ 2.03
MCM3-206ENST00000596983 PDS5BQ9NTI5 1447 aa27.71■■■□□ 2.03
MCM3-206ENST00000596983 KIF21AQ7Z4S6 1674 aa27.7■■■□□ 2.02
MCM3-206ENST00000596983 CADPSQ9ULU8 1353 aa27.65■■■□□ 2.02
MCM3-206ENST00000596983 RSF1Q96T23 1441 aaPredicted RBP27.5■■□□□ 1.99
MCM3-206ENST00000596983 MRC2Q9UBG0 1479 aa27.49■■□□□ 1.99
MCM3-206ENST00000596983 WDR62O43379 1518 aa27.42■■□□□ 1.98
MCM3-206ENST00000596983 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
MCM3-206ENST00000596983 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
MCM3-206ENST00000596983 CFTRP13569 1480 aa27.36■■□□□ 1.97
MCM3-206ENST00000596983 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
MCM3-206ENST00000596983 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
MCM3-206ENST00000596983 CCDC88BA6NC98 1476 aa27.08■■□□□ 1.93
MCM3-206ENST00000596983 PRDM2Q13029 1718 aa27.07■■□□□ 1.92
MCM3-206ENST00000596983 TRIM41Q8WV44 630 aa26.84■■□□□ 1.89
MCM3-206ENST00000596983 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
MCM3-206ENST00000596983 IFT140Q96RY7 1462 aa26.82■■□□□ 1.88
MCM3-206ENST00000596983 OSCARQ8IYS5 282 aa26.82■■□□□ 1.88
MCM3-206ENST00000596983 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
MCM3-206ENST00000596983 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
MCM3-206ENST00000596983 DNMBPQ6XZF7 1577 aa26.75■■□□□ 1.87
MCM3-206ENST00000596983 EIF4G3O43432 1585 aaKnown RBP26.65■■□□□ 1.86
MCM3-206ENST00000596983 TARBP1Q13395 1621 aaKnown RBP26.59■■□□□ 1.85
MCM3-206ENST00000596983 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
MCM3-206ENST00000596983 AQRO60306 1485 aaKnown RBP eCLIP26.53■■□□□ 1.844e-8■■■■■ 41.1
MCM3-206ENST00000596983 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
MCM3-206ENST00000596983 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
MCM3-206ENST00000596983 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
MCM3-206ENST00000596983 RAD54L2Q9Y4B4 1467 aa26.46■■□□□ 1.83
MCM3-206ENST00000596983 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
MCM3-206ENST00000596983 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
MCM3-206ENST00000596983 SOGA1O94964 1423 aa26.42■■□□□ 1.82
MCM3-206ENST00000596983 CHD1O14646 1710 aa26.42■■□□□ 1.82
MCM3-206ENST00000596983 FGD5Q6ZNL6 1462 aa26.41■■□□□ 1.82
MCM3-206ENST00000596983 CUX1P39880 1505 aa26.39■■□□□ 1.81
MCM3-206ENST00000596983 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
MCM3-206ENST00000596983 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
MCM3-206ENST00000596983 FBLN2P98095 1184 aa26.32■■□□□ 1.8
MCM3-206ENST00000596983 SNAPC4Q5SXM2 1469 aa26.29■■□□□ 1.8
MCM3-206ENST00000596983 GRIN2BQ13224 1484 aa26.21■■□□□ 1.79
MCM3-206ENST00000596983 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
MCM3-206ENST00000596983 ARAP1Q96P48 1450 aa26.19■■□□□ 1.78
MCM3-206ENST00000596983 CYB5RLQ6IPT4 315 aa26.19■■□□□ 1.78
MCM3-206ENST00000596983 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.78
MCM3-206ENST00000596983 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.78
MCM3-206ENST00000596983 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
MCM3-206ENST00000596983 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
MCM3-206ENST00000596983 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
MCM3-206ENST00000596983 ABCA10Q8WWZ4 1543 aa26.11■■□□□ 1.77
MCM3-206ENST00000596983 PBRM1Q86U86 1689 aa26.1■■□□□ 1.77
MCM3-206ENST00000596983 ABCA5Q8WWZ7 1642 aa26.08■■□□□ 1.77
MCM3-206ENST00000596983 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
MCM3-206ENST00000596983 BIVM-ERCC5R4GMW8 1640 aa25.97■■□□□ 1.75
MCM3-206ENST00000596983 TOP2BQ02880 1626 aa25.96■■□□□ 1.75
MCM3-206ENST00000596983 ADAMTS12P58397 1594 aa25.88■■□□□ 1.73
MCM3-206ENST00000596983 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
MCM3-206ENST00000596983 TRHP20396 242 aaPredicted RBP25.88■■□□□ 1.73
MCM3-206ENST00000596983 NUP160Q12769 1436 aa25.8■■□□□ 1.72
MCM3-206ENST00000596983 FHAD1B1AJZ9 1412 aa25.79■■□□□ 1.72
MCM3-206ENST00000596983 ERICH3Q5RHP9 1530 aa25.78■■□□□ 1.72
MCM3-206ENST00000596983 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
MCM3-206ENST00000596983 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
MCM3-206ENST00000596983 SHROOM2Q13796 1616 aa25.67■■□□□ 1.7
MCM3-206ENST00000596983 RUSC2Q8N2Y8 1516 aa25.53■■□□□ 1.68
MCM3-206ENST00000596983 PRG4Q92954 1404 aaPredicted RBP25.52■■□□□ 1.68
MCM3-206ENST00000596983 JPH4Q96JJ6 628 aa25.48■■□□□ 1.67
MCM3-206ENST00000596983 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms