RNA–Protein interactions for RNA: ENST00000596922.5

CPT1C-213, Transcript of carnitine palmitoyltransferase 1C, humanhuman

TSL 5

Gene CPT1C, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1C-213ENST00000596922 NISCHQ9Y2I1 1504 aa39.81■■■■□ 3.96
CPT1C-213ENST00000596922 ABCC9O60706 1549 aa37■■■■□ 3.51
CPT1C-213ENST00000596922 CCDC180Q9P1Z9 1646 aa36.06■■■■□ 3.36
CPT1C-213ENST00000596922 DNAJC5BQ9UF47 199 aa35.32■■■■□ 3.24
CPT1C-213ENST00000596922 RB1CC1Q8TDY2 1594 aa34.79■■■■□ 3.16
CPT1C-213ENST00000596922 PABPN1Q86U42 306 aaKnown RBP eCLIP34.34■■■■□ 3.09
CPT1C-213ENST00000596922 NACADO15069 1562 aa34.3■■■■□ 3.08
CPT1C-213ENST00000596922 DCAF8L2P0C7V8 631 aa34.21■■■■□ 3.07
CPT1C-213ENST00000596922 UNC13AQ9UPW8 1703 aa33.91■■■■□ 3.02
CPT1C-213ENST00000596922 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
CPT1C-213ENST00000596922 MYO15BQ96JP2 1530 aa33.46■■■□□ 2.95
CPT1C-213ENST00000596922 CECR2Q9BXF3 1484 aa33.39■■■□□ 2.94
CPT1C-213ENST00000596922 CC2D2AQ9P2K1 1620 aa33.31■■■□□ 2.92
CPT1C-213ENST00000596922 SHROOM4Q9ULL8 1493 aa33.18■■■□□ 2.9
CPT1C-213ENST00000596922 DNAJC5Q9H3Z4 198 aa33.04■■■□□ 2.88
CPT1C-213ENST00000596922 EIF4G1Q04637 1599 aaKnown RBP33.03■■■□□ 2.88
CPT1C-213ENST00000596922 SCRIBQ14160 1630 aa32.95■■■□□ 2.86
CPT1C-213ENST00000596922 ZCCHC6Q5VYS8 1495 aaKnown RBP32.82■■■□□ 2.84
CPT1C-213ENST00000596922 DCAF1Q9Y4B6 1507 aa32.76■■■□□ 2.83
CPT1C-213ENST00000596922 CUX2O14529 1486 aa32.16■■■□□ 2.74
CPT1C-213ENST00000596922 ERCC6Q03468 1493 aa32.07■■■□□ 2.72
CPT1C-213ENST00000596922 NCAPD3P42695 1498 aa31.65■■■□□ 2.66
CPT1C-213ENST00000596922 NESP48681 1621 aa31.51■■■□□ 2.63
CPT1C-213ENST00000596922 ATAD2BQ9ULI0 1458 aa31.48■■■□□ 2.63
CPT1C-213ENST00000596922 TRIM41Q8WV44 630 aa31.47■■■□□ 2.63
CPT1C-213ENST00000596922 HMGXB3Q12766 1538 aa31.37■■■□□ 2.61
CPT1C-213ENST00000596922 SMARCA2P51531 1590 aa31.37■■■□□ 2.61
CPT1C-213ENST00000596922 THOC2Q8NI27 1593 aaKnown RBP31.31■■■□□ 2.6
CPT1C-213ENST00000596922 SMARCA4P51532 1647 aa31.25■■■□□ 2.59
CPT1C-213ENST00000596922 BAZ1BQ9UIG0 1483 aaKnown RBP31.21■■■□□ 2.59
CPT1C-213ENST00000596922 LAMC3Q9Y6N6 1575 aa31.11■■■□□ 2.57
CPT1C-213ENST00000596922 KIF21AQ7Z4S6 1674 aa31.06■■■□□ 2.56
CPT1C-213ENST00000596922 PDS5BQ9NTI5 1447 aa31.01■■■□□ 2.55
CPT1C-213ENST00000596922 BAZ1AQ9NRL2 1556 aaPredicted RBP30.99■■■□□ 2.55
CPT1C-213ENST00000596922 PEG3Q9GZU2 1588 aa30.87■■■□□ 2.53
CPT1C-213ENST00000596922 MRC2Q9UBG0 1479 aa30.8■■■□□ 2.52
CPT1C-213ENST00000596922 CADPSQ9ULU8 1353 aa30.7■■■□□ 2.51
CPT1C-213ENST00000596922 MROH2BQ7Z745 1585 aa30.7■■■□□ 2.5
CPT1C-213ENST00000596922 WDR62O43379 1518 aa30.69■■■□□ 2.5
CPT1C-213ENST00000596922 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
CPT1C-213ENST00000596922 CEP164Q9UPV0 1460 aa30.54■■■□□ 2.48
CPT1C-213ENST00000596922 FANCD2Q9BXW9 1451 aa30.4■■■□□ 2.46
CPT1C-213ENST00000596922 WIZO95785 1651 aa30.3■■■□□ 2.44
CPT1C-213ENST00000596922 RIMBP3CA6NJZ7 1639 aa30.26■■■□□ 2.44
CPT1C-213ENST00000596922 RIMBP3BA6NNM3 1639 aa30.26■■■□□ 2.44
CPT1C-213ENST00000596922 RIMBP3Q9UFD9 1639 aa30.26■■■□□ 2.44
CPT1C-213ENST00000596922 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
CPT1C-213ENST00000596922 CFTRP13569 1480 aa30.15■■■□□ 2.42
CPT1C-213ENST00000596922 ARHGEF11O15085 1522 aa30.09■■■□□ 2.41
CPT1C-213ENST00000596922 TRHP20396 242 aaPredicted RBP30.01■■■□□ 2.39
CPT1C-213ENST00000596922 CYB5RLQ6IPT4 315 aa29.99■■■□□ 2.39
CPT1C-213ENST00000596922 ZNF608Q9ULD9 1512 aaPredicted RBP29.96■■■□□ 2.39
CPT1C-213ENST00000596922 IFT140Q96RY7 1462 aa29.92■■■□□ 2.38
CPT1C-213ENST00000596922 TOP2AP11388 1531 aaKnown RBP29.86■■■□□ 2.37
CPT1C-213ENST00000596922 PRDM2Q13029 1718 aa29.77■■■□□ 2.36
CPT1C-213ENST00000596922 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
CPT1C-213ENST00000596922 EIF4G3O43432 1585 aaKnown RBP29.76■■■□□ 2.35
CPT1C-213ENST00000596922 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
CPT1C-213ENST00000596922 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
CPT1C-213ENST00000596922 TOPBP1Q92547 1522 aa29.71■■■□□ 2.35
CPT1C-213ENST00000596922 FBLN2P98095 1184 aa29.71■■■□□ 2.35
CPT1C-213ENST00000596922 CHD1O14646 1710 aa29.68■■■□□ 2.34
CPT1C-213ENST00000596922 AQRO60306 1485 aaKnown RBP eCLIP29.6■■■□□ 2.33
CPT1C-213ENST00000596922 ABCC8Q09428 1581 aa29.56■■■□□ 2.32
CPT1C-213ENST00000596922 DNMBPQ6XZF7 1577 aa29.53■■■□□ 2.32
CPT1C-213ENST00000596922 CCDC88BA6NC98 1476 aa29.52■■■□□ 2.32
CPT1C-213ENST00000596922 TARBP1Q13395 1621 aaKnown RBP29.45■■■□□ 2.31
CPT1C-213ENST00000596922 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
CPT1C-213ENST00000596922 TDRD9Q8NDG6 1382 aaKnown RBP29.31■■■□□ 2.28
CPT1C-213ENST00000596922 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
CPT1C-213ENST00000596922 RAD54L2Q9Y4B4 1467 aa29.29■■■□□ 2.28
CPT1C-213ENST00000596922 CHMP7Q8WUX9 453 aaPredicted RBP29.28■■■□□ 2.28
CPT1C-213ENST00000596922 CLASP1Q7Z460 1538 aa29.27■■■□□ 2.28
CPT1C-213ENST00000596922 SYNJ1O43426 1573 aa29.26■■■□□ 2.27
CPT1C-213ENST00000596922 SOGA1O94964 1423 aa29.23■■■□□ 2.27
CPT1C-213ENST00000596922 MAGI1Q96QZ7 1491 aaPredicted RBP29.13■■■□□ 2.25
CPT1C-213ENST00000596922 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
CPT1C-213ENST00000596922 FGD5Q6ZNL6 1462 aa29.09■■■□□ 2.25
CPT1C-213ENST00000596922 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
CPT1C-213ENST00000596922 GRIN2BQ13224 1484 aa29.07■■■□□ 2.24
CPT1C-213ENST00000596922 SYNJ2O15056 1496 aa29.06■■■□□ 2.24
CPT1C-213ENST00000596922 PBRM1Q86U86 1689 aa28.89■■■□□ 2.21
CPT1C-213ENST00000596922 CUX1P39880 1505 aa28.89■■■□□ 2.21
CPT1C-213ENST00000596922 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
CPT1C-213ENST00000596922 GRIN2AQ12879 1464 aa28.69■■■□□ 2.18
CPT1C-213ENST00000596922 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
CPT1C-213ENST00000596922 ABCA5Q8WWZ7 1642 aa28.68■■■□□ 2.18
CPT1C-213ENST00000596922 ABCA10Q8WWZ4 1543 aa28.65■■■□□ 2.18
CPT1C-213ENST00000596922 KIF13AQ9H1H9 1805 aa28.6■■■□□ 2.17
CPT1C-213ENST00000596922 NUP160Q12769 1436 aa28.58■■■□□ 2.17
CPT1C-213ENST00000596922 ADAMTS12P58397 1594 aa28.57■■■□□ 2.16
CPT1C-213ENST00000596922 FAM69CQ0P6D2 419 aa28.51■■■□□ 2.15
CPT1C-213ENST00000596922 SHROOM2Q13796 1616 aa28.51■■■□□ 2.15
CPT1C-213ENST00000596922 FHAD1B1AJZ9 1412 aa28.45■■■□□ 2.15
CPT1C-213ENST00000596922 PRG4Q92954 1404 aaPredicted RBP28.44■■■□□ 2.14
CPT1C-213ENST00000596922 ILDR1Q86SU0 546 aaPredicted RBP28.44■■■□□ 2.14
CPT1C-213ENST00000596922 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
CPT1C-213ENST00000596922 NPM1P06748 294 aaKnown RBP eCLIP28.43■■■□□ 2.14
CPT1C-213ENST00000596922 ABCC10Q5T3U5 1492 aa28.4■■■□□ 2.14
CPT1C-213ENST00000596922 KDM4FA0A1W2PPD8 638 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms