RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 NISCHQ9Y2I1 1504 aa53.14■■■■■ 6.1
C19orf54-205ENST00000596809 CCDC180Q9P1Z9 1646 aa47.37■■■■■ 5.17
C19orf54-205ENST00000596809 ABCC9O60706 1549 aa47.03■■■■■ 5.12
C19orf54-205ENST00000596809 RB1CC1Q8TDY2 1594 aa44.92■■■■■ 4.78
C19orf54-205ENST00000596809 DCAF8L2P0C7V8 631 aa44.78■■■■■ 4.76
C19orf54-205ENST00000596809 NACADO15069 1562 aa44.75■■■■■ 4.75
C19orf54-205ENST00000596809 MYO15BQ96JP2 1530 aa44.3■■■■■ 4.68
C19orf54-205ENST00000596809 ZCCHC6Q5VYS8 1495 aaKnown RBP44.12■■■■■ 4.65
C19orf54-205ENST00000596809 PABPN1Q86U42 306 aaKnown RBP eCLIP43.94■■■■■ 4.62
C19orf54-205ENST00000596809 DCAF1Q9Y4B6 1507 aa43.91■■■■■ 4.62
C19orf54-205ENST00000596809 UNC13AQ9UPW8 1703 aa43.79■■■■■ 4.6
C19orf54-205ENST00000596809 DNAJC5BQ9UF47 199 aa43.76■■■■■ 4.6
C19orf54-205ENST00000596809 BICRAQ9NZM4 1560 aa43.59■■■■■ 4.57
C19orf54-205ENST00000596809 SCRIBQ14160 1630 aa43.25■■■■■ 4.51
C19orf54-205ENST00000596809 SHROOM4Q9ULL8 1493 aa43.06■■■■■ 4.48
C19orf54-205ENST00000596809 EIF4G1Q04637 1599 aaKnown RBP42.49■■■■■ 4.39
C19orf54-205ENST00000596809 CC2D2AQ9P2K1 1620 aa42.45■■■■■ 4.39
C19orf54-205ENST00000596809 CECR2Q9BXF3 1484 aa42.31■■■■■ 4.36
C19orf54-205ENST00000596809 NCAPD3P42695 1498 aa41.36■■■■■ 4.21
C19orf54-205ENST00000596809 SMARCA4P51532 1647 aa41.29■■■■■ 4.2
C19orf54-205ENST00000596809 ATAD2BQ9ULI0 1458 aa41.28■■■■■ 4.2
C19orf54-205ENST00000596809 BAZ1AQ9NRL2 1556 aaPredicted RBP41.2■■■■■ 4.19
C19orf54-205ENST00000596809 SMARCA2P51531 1590 aa41.16■■■■■ 4.18
C19orf54-205ENST00000596809 HMGXB3Q12766 1538 aa41.02■■■■■ 4.16
C19orf54-205ENST00000596809 MROH2BQ7Z745 1585 aa40.95■■■■■ 4.15
C19orf54-205ENST00000596809 PEG3Q9GZU2 1588 aa40.91■■■■■ 4.14
C19orf54-205ENST00000596809 BAZ1BQ9UIG0 1483 aaKnown RBP40.9■■■■■ 4.14
C19orf54-205ENST00000596809 ERCC6Q03468 1493 aa40.57■■■■■ 4.08
C19orf54-205ENST00000596809 NESP48681 1621 aa40.53■■■■■ 4.08
C19orf54-205ENST00000596809 WIZO95785 1651 aa40.44■■■■■ 4.06
C19orf54-205ENST00000596809 RSF1Q96T23 1441 aaPredicted RBP40.33■■■■■ 4.05
C19orf54-205ENST00000596809 CUX2O14529 1486 aa40.31■■■■■ 4.04
C19orf54-205ENST00000596809 LAMC3Q9Y6N6 1575 aa40.28■■■■■ 4.04
C19orf54-205ENST00000596809 CADPSQ9ULU8 1353 aa40.14■■■■■ 4.02
C19orf54-205ENST00000596809 PDS5BQ9NTI5 1447 aa40.1■■■■■ 4.01
C19orf54-205ENST00000596809 TOP2AP11388 1531 aaKnown RBP39.97■■■■□ 3.99
C19orf54-205ENST00000596809 THOC2Q8NI27 1593 aaKnown RBP39.93■■■■□ 3.98
C19orf54-205ENST00000596809 KIF21AQ7Z4S6 1674 aa39.92■■■■□ 3.98
C19orf54-205ENST00000596809 DNAJC5Q9H3Z4 198 aa39.84■■■■□ 3.97
C19orf54-205ENST00000596809 CFTRP13569 1480 aa39.76■■■■□ 3.96
C19orf54-205ENST00000596809 MRC2Q9UBG0 1479 aa39.69■■■■□ 3.94
C19orf54-205ENST00000596809 FANCD2Q9BXW9 1451 aa39.65■■■■□ 3.94
C19orf54-205ENST00000596809 CEP164Q9UPV0 1460 aa39.62■■■■□ 3.93
C19orf54-205ENST00000596809 CCDC88BA6NC98 1476 aa39.58■■■■□ 3.93
C19orf54-205ENST00000596809 WDR62O43379 1518 aa39.55■■■■□ 3.92
C19orf54-205ENST00000596809 URB2Q14146 1524 aaKnown RBP39.28■■■■□ 3.88
C19orf54-205ENST00000596809 PRDM2Q13029 1718 aa39.2■■■■□ 3.87
C19orf54-205ENST00000596809 SUPT5HO00267 1087 aaKnown RBP38.97■■■■□ 3.83
C19orf54-205ENST00000596809 TOPBP1Q92547 1522 aa38.94■■■■□ 3.82
C19orf54-205ENST00000596809 ABCC8Q09428 1581 aa38.91■■■■□ 3.82
C19orf54-205ENST00000596809 IFT140Q96RY7 1462 aa38.84■■■■□ 3.81
C19orf54-205ENST00000596809 DNMBPQ6XZF7 1577 aa38.81■■■■□ 3.8
C19orf54-205ENST00000596809 ZNF608Q9ULD9 1512 aaPredicted RBP38.73■■■■□ 3.79
C19orf54-205ENST00000596809 OSCARQ8IYS5 282 aa38.66■■■■□ 3.78
C19orf54-205ENST00000596809 POLA1P09884 1462 aaPredicted RBP38.58■■■■□ 3.77
C19orf54-205ENST00000596809 TARBP1Q13395 1621 aaKnown RBP38.52■■■■□ 3.76
C19orf54-205ENST00000596809 AQRO60306 1485 aaKnown RBP eCLIP38.47■■■■□ 3.756e-6■■■■□ 25.1
C19orf54-205ENST00000596809 SOGA1O94964 1423 aa38.46■■■■□ 3.75
C19orf54-205ENST00000596809 EIF4G3O43432 1585 aaKnown RBP38.46■■■■□ 3.75
C19orf54-205ENST00000596809 RAD54L2Q9Y4B4 1467 aa38.45■■■■□ 3.75
C19orf54-205ENST00000596809 CUX1P39880 1505 aa38.43■■■■□ 3.74
C19orf54-205ENST00000596809 FGD5Q6ZNL6 1462 aa38.41■■■■□ 3.74
C19orf54-205ENST00000596809 TDRD9Q8NDG6 1382 aaKnown RBP38.34■■■■□ 3.73
C19orf54-205ENST00000596809 TRIM41Q8WV44 630 aa38.28■■■■□ 3.72
C19orf54-205ENST00000596809 FBLN2P98095 1184 aa38.18■■■■□ 3.7
C19orf54-205ENST00000596809 WDR97A6NE52 1622 aa38.14■■■■□ 3.7
C19orf54-205ENST00000596809 SNAPC4Q5SXM2 1469 aa38.05■■■■□ 3.68
C19orf54-205ENST00000596809 CHD1O14646 1710 aa38.04■■■■□ 3.68
C19orf54-205ENST00000596809 GRIN2BQ13224 1484 aa38.04■■■■□ 3.68
C19orf54-205ENST00000596809 WRNQ14191 1432 aaPredicted RBP eCLIP38.03■■■■□ 3.68
C19orf54-205ENST00000596809 ABCA10Q8WWZ4 1543 aa38■■■■□ 3.67
C19orf54-205ENST00000596809 GAPVD1Q14C86 1478 aa37.97■■■■□ 3.67
C19orf54-205ENST00000596809 CHMP7Q8WUX9 453 aaPredicted RBP37.97■■■■□ 3.67
C19orf54-205ENST00000596809 MAGI1Q96QZ7 1491 aaPredicted RBP37.96■■■■□ 3.67
C19orf54-205ENST00000596809 RIMBP3CA6NJZ7 1639 aa37.95■■■■□ 3.67
C19orf54-205ENST00000596809 RIMBP3BA6NNM3 1639 aa37.95■■■■□ 3.67
C19orf54-205ENST00000596809 RIMBP3Q9UFD9 1639 aa37.95■■■■□ 3.67
C19orf54-205ENST00000596809 TOP2BQ02880 1626 aa37.93■■■■□ 3.66
C19orf54-205ENST00000596809 ARHGEF11O15085 1522 aa37.92■■■■□ 3.66
C19orf54-205ENST00000596809 SYNJ1O43426 1573 aa37.9■■■■□ 3.66
C19orf54-205ENST00000596809 BIVM-ERCC5R4GMW8 1640 aa37.89■■■■□ 3.66
C19orf54-205ENST00000596809 SYNJ2O15056 1496 aa37.85■■■■□ 3.65
C19orf54-205ENST00000596809 ABCA5Q8WWZ7 1642 aa37.83■■■■□ 3.65
C19orf54-205ENST00000596809 PBRM1Q86U86 1689 aa37.79■■■■□ 3.64
C19orf54-205ENST00000596809 CYB5RLQ6IPT4 315 aa37.72■■■■□ 3.63
C19orf54-205ENST00000596809 CLASP1Q7Z460 1538 aa37.69■■■■□ 3.62
C19orf54-205ENST00000596809 ARAP1Q96P48 1450 aa37.58■■■■□ 3.61
C19orf54-205ENST00000596809 GRIN2AQ12879 1464 aa37.53■■■■□ 3.6
C19orf54-205ENST00000596809 FHAD1B1AJZ9 1412 aa37.53■■■■□ 3.6
C19orf54-205ENST00000596809 ERICH3Q5RHP9 1530 aa37.51■■■■□ 3.6
C19orf54-205ENST00000596809 ADAMTS12P58397 1594 aa37.51■■■■□ 3.6
C19orf54-205ENST00000596809 NUP160Q12769 1436 aa37.4■■■■□ 3.58
C19orf54-205ENST00000596809 CEP170Q5SW79 1584 aa37.34■■■■□ 3.57
C19orf54-205ENST00000596809 KIF27Q86VH2 1401 aa37.27■■■■□ 3.56
C19orf54-205ENST00000596809 IGF1RP08069 1367 aa37.24■■■■□ 3.55
C19orf54-205ENST00000596809 ERCC6L2Q5T890 1561 aa37.16■■■■□ 3.54
C19orf54-205ENST00000596809 TRHP20396 242 aaPredicted RBP37.15■■■■□ 3.54
C19orf54-205ENST00000596809 JPH4Q96JJ6 628 aa37.11■■■■□ 3.53
C19orf54-205ENST00000596809 SHROOM2Q13796 1616 aa37.1■■■■□ 3.53
C19orf54-205ENST00000596809 PRG4Q92954 1404 aaPredicted RBP37.03■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms